RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 MMP17Q9ULZ9 603 aa16.45■□□□□ 0.22
UPF3A-208ENST00000484246 CACNA1HO95180 2353 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 CCDC163A0A0D9SF12 145 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 FAM170AA1A519 330 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 F5H5T6 163 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 I6L893 689 aaPredicted RBP16.44■□□□□ 0.22
UPF3A-208ENST00000484246 NPC1O15118 1278 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 TSPAN3O60637 253 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 PAGE1O75459 146 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 ADCY5O95622 1261 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 FTLP02792 175 aaPredicted RBP16.44■□□□□ 0.22
UPF3A-208ENST00000484246 HNRNPLP14866 589 aaKnown RBP eCLIP16.44■□□□□ 0.22
UPF3A-208ENST00000484246 GPD1P21695 349 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 HLA-FP30511 346 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 ZNF143P52747 638 aaPredicted RBP16.44■□□□□ 0.22
UPF3A-208ENST00000484246 MAMLD1Q13495 774 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 RAP1GAP2Q684P5 730 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 CNGA4Q8IV77 575 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 ZNF683Q8IZ20 524 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 IL17RCQ8NAC3 791 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 ZBTB44Q8NCP5 570 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 FIBINQ8TAL6 211 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 FNIP1Q8TF40 1166 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 RNF34Q969K3 372 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 C1orf74Q96LT6 269 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 HAPLN3Q96S86 360 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 TKTL2Q9H0I9 626 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 WDCPQ9H6R7 721 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 ANLNQ9NQW6 1124 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 C2orf42Q9NWW7 574 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 ADAMTS1Q9UHI8 967 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 HCN2Q9UL51 889 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 PCDHGA2Q9Y5H1 932 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 HS3ST4Q9Y661 456 aa16.44■□□□□ 0.22
UPF3A-208ENST00000484246 SYNJ2BP-COX16A0A087WUM0 186 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 A0A087X0T9 212 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 ANKRD62A6NC57 917 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 PRRT4C9JH25 899 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 H0Y858 1186 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 TIMM44O43615 452 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 TBL1XO60907 577 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 LUC7L3O95232 432 aaKnown RBP16.43■□□□□ 0.22
UPF3A-208ENST00000484246 GJB6O95452 261 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 PLEKP08567 350 aaPredicted RBP16.43■□□□□ 0.22
UPF3A-208ENST00000484246 FAM228BP0C875 321 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 NBL1P41271 181 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 ZNF75DP51815 510 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 HDAC4P56524 1084 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 RPS24P62847 133 aaKnown RBP16.43■□□□□ 0.22
UPF3A-208ENST00000484246 NRG1Q02297 640 aaPredicted RBP16.43■□□□□ 0.22
UPF3A-208ENST00000484246 NHLH1Q02575 133 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 ENPP2Q13822 863 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 AUHQ13825 339 aaKnown RBP16.43■□□□□ 0.22
UPF3A-208ENST00000484246 GEN1Q17RS7 908 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 ASTE1Q2TB18 679 aaPredicted RBP16.43■□□□□ 0.22
UPF3A-208ENST00000484246 RABGAP1LQ5R372 815 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 LGI2Q8N0V4 545 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 CAMKK1Q8N5S9 505 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 NTAN1Q96AB6 310 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 MCEEQ96PE7 176 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 CNPY3Q9BT09 278 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 ZSCAN32Q9NX65 697 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 COX16Q9P0S2 106 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 SCINQ9Y6U3 715 aa16.43■□□□□ 0.22
UPF3A-208ENST00000484246 IGLV3-10A0A075B6K4 115 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 A0A1B0GVM2 712 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 TCAF2A6NFQ2 919 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 TMCO5BA8MYB1 307 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 PROB1E7EW31 1015 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 ATXN1P54253 815 aaKnown RBP16.42■□□□□ 0.22
UPF3A-208ENST00000484246 NRLP54845 237 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 RPL7AP62424 266 aaKnown RBP16.42■□□□□ 0.22
UPF3A-208ENST00000484246 ATP11AP98196 1134 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 CSTF1Q05048 431 aaKnown RBP16.42■□□□□ 0.22
UPF3A-208ENST00000484246 SCAPQ12770 1279 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 DMC1Q14565 340 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 C15orf59Q2T9L4 293 aaPredicted RBP16.42■□□□□ 0.22
UPF3A-208ENST00000484246 EOGTQ5NDL2 527 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 ARTNQ5T4W7 220 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 FBXL22Q6P050 247 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 ZC3H14Q6PJT7 736 aaKnown RBP16.42■□□□□ 0.22
UPF3A-208ENST00000484246 CHST9Q7L1S5 443 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 PHLDB2Q86SQ0 1253 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 FAM131BQ86XD5 332 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 MFN1Q8IWA4 741 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 AHI1Q8N157 1196 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 ZNF513Q8N8E2 541 aaPredicted RBP16.42■□□□□ 0.22
UPF3A-208ENST00000484246 WFDC5Q8TCV5 224 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 GABRG3Q99928 467 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 ZNHIT6Q9NWK9 470 aaKnown RBP16.42■□□□□ 0.22
UPF3A-208ENST00000484246 CNOT8Q9UFF9 292 aaKnown RBP16.42■□□□□ 0.22
UPF3A-208ENST00000484246 GGA2Q9UJY4 613 aa16.42■□□□□ 0.22
UPF3A-208ENST00000484246 ANTXRLA6NF34 631 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 TMEM191CA6NGB0 347 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 CCP110O43303 1012 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 LILRB5O75023 590 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 ADAM23O75077 832 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 PABPC1P11940 636 aaKnown RBP16.41■□□□□ 0.22
UPF3A-208ENST00000484246 DGKEP52429 567 aa16.41■□□□□ 0.22
UPF3A-208ENST00000484246 AIF1P55008 147 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms