RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 DDX42Q86XP3 938 aaKnown RBP eCLIP14.45□□□□□ -0.1
SMAD9-204ENST00000483941 MIB1Q86YT6 1006 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 RFX6Q8HWS3 928 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 MMGT1Q8N4V1 131 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 CCDC185Q8N715 623 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 MYRIPQ8NFW9 859 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 GRK7Q8WTQ7 553 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 FAF2Q96CS3 445 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 RNF157Q96PX1 679 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 ATXN3LQ9H3M9 355 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 SLITRK6Q9H5Y7 841 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 CCSER2Q9H7U1 834 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 PCDH18Q9HCL0 1135 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 OR12D3Q9UGF7 316 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 ZNF510Q9Y2H8 683 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 NR2E1Q9Y466 385 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 RAD54BQ9Y620 910 aa14.45□□□□□ -0.1
SMAD9-204ENST00000483941 CCDC195A0A1B0GUA6 201 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 PDE2AO00408 941 aaPredicted RBP14.44□□□□□ -0.1
SMAD9-204ENST00000483941 EEF2KO00418 725 aaKnown RBP14.44□□□□□ -0.1
SMAD9-204ENST00000483941 APOL1O14791 398 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 FGF10O15520 208 aaPredicted RBP14.44□□□□□ -0.1
SMAD9-204ENST00000483941 COCHO43405 550 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 CST8O60676 142 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 IGLV3-27P01718 113 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 MBL2P11226 248 aaPredicted RBP14.44□□□□□ -0.1
SMAD9-204ENST00000483941 MYL4P12829 197 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 HOXB8P17481 243 aaPredicted RBP14.44□□□□□ -0.1
SMAD9-204ENST00000483941 MCM3P25205 808 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 ID4P47928 161 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 FNTAP49354 379 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 ATXN1P54253 815 aaKnown RBP14.44□□□□□ -0.1
SMAD9-204ENST00000483941 TPI1P60174 286 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 KLF1Q13351 362 aaPredicted RBP14.44□□□□□ -0.1
SMAD9-204ENST00000483941 CCNG2Q16589 344 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 ANKRD20A8PQ5CZ79 823 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 KAZNQ674X7 775 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 ANKRD54Q6NXT1 300 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 TMC8Q8IU68 726 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 UBALD2Q8IYN6 164 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 TMEM105Q8N8V8 129 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 MAGOHBQ96A72 148 aaKnown RBP14.44□□□□□ -0.1
SMAD9-204ENST00000483941 HAUS1Q96CS2 278 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 FCRL2Q96LA5 508 aaPredicted RBP14.44□□□□□ -0.1
SMAD9-204ENST00000483941 FERMT1Q9BQL6 677 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 ADAM33Q9BZ11 813 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 CATSPERBQ9H7T0 1116 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 IL21Q9HBE4 155 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 KLHL11Q9NVR0 708 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 CALCOCO1Q9P1Z2 691 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 SORCS3Q9UPU3 1222 aa14.44□□□□□ -0.1
SMAD9-204ENST00000483941 APOC4-APOC2K7ER74 178 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 PHF2O75151 1096 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 PAGE1O75459 146 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 TBX18O95935 607 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 APOC2P02655 101 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 SERPINB6P35237 376 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 PGFP49763 221 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 MLLT6P55198 1093 aaPredicted RBP14.43□□□□□ -0.1
SMAD9-204ENST00000483941 SLC7A9P82251 487 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 DHX34Q14147 1143 aaKnown RBP14.43□□□□□ -0.1
SMAD9-204ENST00000483941 CYP1B1Q16678 543 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 DRICH1Q6PGQ1 229 aaPredicted RBP14.43□□□□□ -0.1
SMAD9-204ENST00000483941 LZTR1Q8N653 840 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 C12orf50Q8NA57 414 aaPredicted RBP14.43□□□□□ -0.1
SMAD9-204ENST00000483941 TSC1Q92574 1164 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 P3H4Q92791 437 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 NKD2Q969F2 451 aaPredicted RBP14.43□□□□□ -0.1
SMAD9-204ENST00000483941 ACSF2Q96CM8 615 aaPredicted RBP14.43□□□□□ -0.1
SMAD9-204ENST00000483941 CSPG4P5Q96PW8 444 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 KCTD15Q96SI1 283 aaPredicted RBP14.43□□□□□ -0.1
SMAD9-204ENST00000483941 APOL5Q9BWW9 433 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 HEMGNQ9BXL5 484 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 AP1M1Q9BXS5 423 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 LRRC3Q9BY71 257 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 S1PR5Q9H228 398 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 TASP1Q9H6P5 420 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 LRRC19Q9H756 370 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 TRPC7Q9HCX4 862 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 ZNF334Q9HCZ1 680 aaPredicted RBP14.43□□□□□ -0.1
SMAD9-204ENST00000483941 LSM7Q9UK45 103 aaKnown RBP14.43□□□□□ -0.1
SMAD9-204ENST00000483941 NUDT5Q9UKK9 219 aa14.43□□□□□ -0.1
SMAD9-204ENST00000483941 NCAM2O15394 837 aa14.42□□□□□ -0.1
SMAD9-204ENST00000483941 MSI1O43347 362 aaKnown RBP14.42□□□□□ -0.1
SMAD9-204ENST00000483941 CREB3O43889 395 aa14.42□□□□□ -0.1
SMAD9-204ENST00000483941 TADA3O75528 432 aa14.42□□□□□ -0.1
SMAD9-204ENST00000483941 RFPL2O75678 378 aa14.42□□□□□ -0.1
SMAD9-204ENST00000483941 OLFM2O95897 454 aa14.42□□□□□ -0.1
SMAD9-204ENST00000483941 RHOP08100 348 aa14.42□□□□□ -0.1
SMAD9-204ENST00000483941 KRT10P13645 584 aa14.42□□□□□ -0.1
SMAD9-204ENST00000483941 AVPR1AP37288 418 aa14.42□□□□□ -0.1
SMAD9-204ENST00000483941 KCNC3Q14003 757 aa14.42□□□□□ -0.1
SMAD9-204ENST00000483941 RAB6CQ53S08 254 aa14.42□□□□□ -0.1
SMAD9-204ENST00000483941 SLC9A4Q6AI14 798 aa14.42□□□□□ -0.1
SMAD9-204ENST00000483941 C8orf74Q6P047 294 aa14.42□□□□□ -0.1
SMAD9-204ENST00000483941 SYCE2Q6PIF2 218 aa14.42□□□□□ -0.1
SMAD9-204ENST00000483941 RFX8Q6ZV50 586 aa14.42□□□□□ -0.1
SMAD9-204ENST00000483941 SYDE1Q6ZW31 735 aaPredicted RBP14.42□□□□□ -0.1
SMAD9-204ENST00000483941 GAREM2Q75VX8 874 aa14.42□□□□□ -0.1
SMAD9-204ENST00000483941 TMEM150AQ86TG1 271 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms