RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 PTPRNQ16849 979 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 PTPN20Q4JDL3 420 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 DCAF6Q58WW2 860 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 MS4A13Q5J8X5 152 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 TAF3Q5VWG9 929 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 OR6B2Q6IFH4 312 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 TMEM110Q86TL2 294 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 LGI2Q8N0V4 545 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 DEFB106AQ8N104 65 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 WDTC1Q8N5D0 677 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.86□□□□□ -0.67
CPSF4-212ENST00000482251 GPT2Q8TD30 523 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 STK32AQ8WU08 396 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 DDX1Q92499 740 aaKnown RBP10.86□□□□□ -0.67
CPSF4-212ENST00000482251 PRCCQ92733 491 aaPredicted RBP10.86□□□□□ -0.67
CPSF4-212ENST00000482251 SIPA1Q96FS4 1042 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 SLC39A13Q96H72 371 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 PPP1R13BQ96KQ4 1090 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 FAM81BQ96LP2 452 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 GPR174Q9BXC1 333 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 SYNCQ9H7C4 482 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 DDIT4Q9NX09 232 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 USP36Q9P275 1121 aaKnown RBP10.86□□□□□ -0.67
CPSF4-212ENST00000482251 EVLQ9UI08 416 aaPredicted RBP10.86□□□□□ -0.67
CPSF4-212ENST00000482251 GON4LQ3T8J9 2241 aa10.86□□□□□ -0.67
CPSF4-212ENST00000482251 PCDH15Q96QU1 1955 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 FOXN3O00409 490 aaPredicted RBP10.85□□□□□ -0.67
CPSF4-212ENST00000482251 NPC1O15118 1278 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 KCNK5O95279 499 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 POLR2EP19388 210 aaKnown RBP10.85□□□□□ -0.67
CPSF4-212ENST00000482251 TACR2P21452 398 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 ERCC5P28715 1186 aaPredicted RBP10.85□□□□□ -0.67
CPSF4-212ENST00000482251 CLCN1P35523 988 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 KRT9P35527 623 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 CSKP41240 450 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 CTSOP43234 321 aaPredicted RBP10.85□□□□□ -0.67
CPSF4-212ENST00000482251 KLK7P49862 253 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 ATXN3P54252 364 aaPredicted RBP10.85□□□□□ -0.67
CPSF4-212ENST00000482251 CENPCQ03188 943 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 KCNMA1Q12791 1236 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 NME3Q13232 169 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 NNTQ13423 1086 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 DRAP1Q14919 205 aaPredicted RBP10.85□□□□□ -0.67
CPSF4-212ENST00000482251 FSCBQ5H9T9 825 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 N4BP2L1Q5TBK1 243 aaPredicted RBP10.85□□□□□ -0.67
CPSF4-212ENST00000482251 SH3PXD2AQ5TCZ1 1133 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 DAB2IPQ5VWQ8 1189 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 PEAR1Q5VY43 1037 aaPredicted RBP10.85□□□□□ -0.67
CPSF4-212ENST00000482251 OLFML1Q6UWY5 402 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 ZCCHC9Q8N567 271 aaKnown RBP10.85□□□□□ -0.67
CPSF4-212ENST00000482251 SNX19Q92543 992 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 RNF34Q969K3 372 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 CNTNAP3BQ96NU0 1288 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 DDX50Q9BQ39 737 aaKnown RBP10.85□□□□□ -0.67
CPSF4-212ENST00000482251 TRIM62Q9BVG3 475 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 CNTNAP3Q9BZ76 1288 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 MIR1-1HGQ9H1L0 117 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 LHX5Q9H2C1 402 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 PDCL3Q9H2J4 239 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 TMEM245Q9H330 911 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 PCDHGC3Q9UN70 934 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 PLA2G4CQ9UP65 541 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 NFE2L3Q9Y4A8 694 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 CEP83Q9Y592 693 aa10.85□□□□□ -0.67
CPSF4-212ENST00000482251 NYNRINQ9P2P1 1898 aaKnown RBP10.85□□□□□ -0.67
CPSF4-212ENST00000482251 F5H5T6 163 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 H0Y626 953 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 TIMM44O43615 452 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 HSF2BPO75031 334 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 LUC7L3O95232 432 aaKnown RBP10.84□□□□□ -0.67
CPSF4-212ENST00000482251 IGLV3-25P01717 112 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 DLDP09622 509 aaKnown RBP10.84□□□□□ -0.67
CPSF4-212ENST00000482251 IRAK1P51617 712 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 CDK17Q00537 523 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 GFPT1Q06210 699 aaPredicted RBP10.84□□□□□ -0.67
CPSF4-212ENST00000482251 ZNF252P-AS1Q0IIN9 211 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 CAMK2GQ13555 558 aaPredicted RBP10.84□□□□□ -0.67
CPSF4-212ENST00000482251 DUOXA1Q1HG43 343 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 PLEKHG6Q3KR16 790 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 C2CD6Q53TS8 623 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 TCP11X2Q5H9J9 407 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 PITRM1Q5JRX3 1037 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 SPDYCQ5MJ68 293 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 MPP7Q5T2T1 576 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 DPY19L2P1Q6NXN4 242 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 SLC23A3Q6PIS1 610 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 C11orf57Q6ZUT1 292 aaPredicted RBP10.84□□□□□ -0.67
CPSF4-212ENST00000482251 KIAA0907Q7Z7F0 614 aaPredicted RBP10.84□□□□□ -0.67
CPSF4-212ENST00000482251 CCDC117Q8IWD4 279 aaPredicted RBP10.84□□□□□ -0.67
CPSF4-212ENST00000482251 DEFB124Q8NES8 71 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 OR2T3Q8NH03 318 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 NOX5Q96PH1 765 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 SLC2A13Q96QE2 648 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 VPS16Q9H269 839 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 PRSS16Q9NQE7 514 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 WSB2Q9NYS7 404 aaPredicted RBP10.84□□□□□ -0.67
CPSF4-212ENST00000482251 INTS6Q9UL03 887 aaKnown RBP10.84□□□□□ -0.67
CPSF4-212ENST00000482251 CACNA1BQ00975 2339 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 PI4KAP42356 2102 aa10.84□□□□□ -0.67
CPSF4-212ENST00000482251 CNOT1A5YKK6 2376 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms