RNA–Protein interactions for RNA: ENST00000481947.1

SNRNP25-206, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 5

Gene SNRNP25, Length 1,260 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-206ENST00000481947 RAP1GAP2Q684P5 730 aa12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 GPR153Q6NV75 609 aa12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 HTR3DQ70Z44 454 aa12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 DDX42Q86XP3 938 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 DENND1CQ8IV53 801 aa12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 NPAS3Q8IXF0 933 aa12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 FAM217AQ8IXS0 508 aa12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 PLD5Q8N7P1 536 aa12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 C12orf50Q8NA57 414 aaPredicted RBP12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 USP13Q92995 863 aaPredicted RBP12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 TBC1D31Q96DN5 1066 aa12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 PABPC5Q96DU9 382 aaKnown RBP12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 RPGRIP1Q96KN7 1286 aa12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 AP1M1Q9BXS5 423 aa12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 MAK16Q9BXY0 300 aaKnown RBP12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 DCLK3Q9C098 648 aa12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 SMG9Q9H0W8 520 aaKnown RBP12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 SLITRK6Q9H5Y7 841 aa12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 PRDM16Q9HAZ2 1276 aa12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 RBM12Q9NTZ6 932 aaKnown RBP12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 ETNK2Q9NVF9 386 aa12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 CFAP97Q9P2B7 532 aa12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 CCL26Q9Y258 94 aa12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 R3HDM2Q9Y2K5 976 aaKnown RBP12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 PRRC2BQ5JSZ5 2229 aaKnown RBP12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 REV3LO60673 3130 aa12.3□□□□□ -0.44
SNRNP25-206ENST00000481947 KIF26AQ9ULI4 1882 aaPredicted RBP12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 IGLV3-10A0A075B6K4 115 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 CTAGE15A4D2H0 777 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 DRGXA6NNA5 263 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 CCDC188H7C350 402 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 APOC4-APOC2K7ER74 178 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 GFRA2O00451 464 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 APOL1O14791 398 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 APOC2P02655 101 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 CTAGE8P0CG41 777 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 ERCC2P18074 760 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 TGM2P21980 687 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 SLC6A4P31645 630 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 SLC11A2P49281 568 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 DYNLT1P63172 113 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 USP4Q13107 963 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 CBX2Q14781 532 aaPredicted RBP12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 C5orf22Q49AR2 442 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 NCBP2-AS2Q69YL0 99 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 FBXL22Q6P050 247 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 NPNTQ6UXI9 565 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 CTAGE6Q86UF2 777 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 CHSY1Q86X52 802 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 CTAGE4Q8IX94 777 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 RIN3Q8TB24 985 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 SH3RF2Q8TEC5 729 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 MYEOVQ96EZ4 313 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 TDP1Q9NUW8 608 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 PPARGC1AQ9UBK2 798 aaKnown RBP12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 LSM7Q9UK45 103 aaKnown RBP12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 VANGL2Q9ULK5 521 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 MFHAS1Q9Y4C4 1052 aa12.29□□□□□ -0.44
SNRNP25-206ENST00000481947 TRIOBPQ9H2D6 2365 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 GOLGA6L10A0A0M3HER8 536 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 E2F8A0AVK6 867 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 WASH4PA8MWX3 477 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 FGF10O15520 208 aaPredicted RBP12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 DAPK3O43293 454 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 PHF2O75151 1096 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 PECAM1P16284 738 aaPredicted RBP12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 ZFXP17010 805 aaPredicted RBP12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 EPHB2P29323 1055 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 IRAK1P51617 712 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 OTUD4Q01804 1114 aaKnown RBP12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 PAFAH1B3Q15102 231 aaKnown RBP12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 ZNF77Q15935 545 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 CCNG2Q16589 344 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 ATAT1Q5SQI0 421 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 ADGRF1Q5T601 910 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 CES5AQ6NT32 575 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 RFWD3Q6PCD5 774 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 LRRC31Q6UY01 552 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 Q7L0L9 218 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 GET4Q7L5D6 327 aaPredicted RBP12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 NLRP14Q86W24 1093 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 ARID3BQ8IVW6 561 aaPredicted RBP12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 LGI2Q8N0V4 545 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 MICALL1Q8N3F8 863 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 MMGT1Q8N4V1 131 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 TTC13Q8NBP0 860 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 NOA1Q8NC60 698 aaKnown RBP12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 ZSCAN18Q8TBC5 510 aaPredicted RBP12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 C1orf54Q8WWF1 131 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 MYLIPQ8WY64 445 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 FGF13Q92913 245 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 IGSF8Q969P0 613 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 HAUS1Q96CS2 278 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 RIPOR3Q96MK2 946 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 PRICKLE1Q96MT3 831 aaPredicted RBP12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 CDX2Q99626 313 aaPredicted RBP12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 LRRC19Q9H756 370 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 KIF9Q9HAQ2 790 aa12.28□□□□□ -0.44
SNRNP25-206ENST00000481947 GDE1Q9NZC3 331 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms