RNA–Protein interactions for RNA: ENST00000479335.5

RAD51B-208, Transcript of RAD51 paralog B, humanhuman

TSL 1 (best)

Gene RAD51B, Length 1,615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-208ENST00000479335 MTRRQ9UBK8 725 aa10.15□□□□□ -0.78
RAD51B-208ENST00000479335 TLR6Q9Y2C9 796 aa10.15□□□□□ -0.78
RAD51B-208ENST00000479335 TEX264Q9Y6I9 313 aa10.15□□□□□ -0.78
RAD51B-208ENST00000479335 EXOC1LA0A1B0GW35 172 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 GOLGA8MH3BSY2 632 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 TRDMT1O14717 391 aaKnown RBP10.15□□□□□ -0.79
RAD51B-208ENST00000479335 EPHB2P29323 1055 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 MAGEA3P43357 314 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 TUFMP49411 452 aaKnown RBP10.15□□□□□ -0.79
RAD51B-208ENST00000479335 NRLP54845 237 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 MLLT6P55198 1093 aaPredicted RBP10.15□□□□□ -0.79
RAD51B-208ENST00000479335 GPX6P59796 221 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 IFI35P80217 286 aaPredicted RBP10.15□□□□□ -0.79
RAD51B-208ENST00000479335 GALNT2Q10471 571 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 AP1B1Q10567 949 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 FASTKD3Q14CZ7 662 aaKnown RBP10.15□□□□□ -0.79
RAD51B-208ENST00000479335 KLHL38Q2WGJ6 581 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 BBS9Q3SYG4 887 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 MSS51Q4VC12 460 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 MANEALQ5VSG8 457 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.15□□□□□ -0.79
RAD51B-208ENST00000479335 C3orf62Q6ZUJ4 267 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 EXOC3L1Q86VI1 746 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 LRRC49Q8IUZ0 686 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 CCDC13Q8IYE1 715 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 GPR65Q8IYL9 337 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 ATAD1Q8NBU5 361 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 FBXO36Q8NEA4 188 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 FBXO22Q8NEZ5 403 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 CASP10Q92851 521 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 ARHGEF2Q92974 986 aaKnown RBP10.15□□□□□ -0.79
RAD51B-208ENST00000479335 ZNF689Q96CS4 500 aaPredicted RBP10.15□□□□□ -0.79
RAD51B-208ENST00000479335 IGSF21Q96ID5 467 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 TSGA13Q96PP4 275 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 CDK5RAP1Q96SZ6 601 aaKnown RBP10.15□□□□□ -0.79
RAD51B-208ENST00000479335 LGMNQ99538 433 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 TTLL2Q9BWV7 592 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 ACSS3Q9H6R3 686 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 TLR8Q9NR97 1041 aaKnown RBP10.15□□□□□ -0.79
RAD51B-208ENST00000479335 SENP1Q9P0U3 644 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 RABGEF1Q9UJ41 708 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 TRHDEQ9UKU6 1024 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 ATP11BQ9Y2G3 1177 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 MFHAS1Q9Y4C4 1052 aa10.15□□□□□ -0.79
RAD51B-208ENST00000479335 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.15□□□□□ -0.79
RAD51B-208ENST00000479335 CLUHO75153 1309 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 SMIM23A6NLE4 172 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 WASH4PA8MWX3 477 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 NT5C1B-RDH14C9J2C7 533 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 PAGE1O75459 146 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 MAP3K6O95382 1288 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 METTL18O95568 372 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 TIMP1P01033 207 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 AMHP03971 560 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 APRTP07741 180 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 ZDHHC11BP0C7U3 371 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 VAV1P15498 845 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 LSP1P33241 339 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 SLCO1A2P46721 670 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 KPNA1P52294 538 aaPredicted RBP10.14□□□□□ -0.79
RAD51B-208ENST00000479335 GEMIN4P57678 1058 aaKnown RBP10.14□□□□□ -0.79
RAD51B-208ENST00000479335 IFRD2Q12894 506 aaPredicted RBP10.14□□□□□ -0.79
RAD51B-208ENST00000479335 RNF19BQ6ZMZ0 732 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 CYS1Q717R9 158 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 B4GALNT4Q76KP1 1039 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 CAND1Q86VP6 1230 aaKnown RBP10.14□□□□□ -0.79
RAD51B-208ENST00000479335 CCNJLQ8IV13 435 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 COLGALT1Q8NBJ5 622 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 CCNYQ8ND76 341 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 OVCA2Q8WZ82 227 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 MAML1Q92585 1016 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 VWCEQ96DN2 955 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 TBC1D31Q96DN5 1066 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 PGLYRP2Q96PD5 576 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 CYTH2Q99418 400 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 UBE2OQ9C0C9 1292 aaKnown RBP10.14□□□□□ -0.79
RAD51B-208ENST00000479335 EPN3Q9H201 632 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 C11orf49Q9H6J7 331 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.14□□□□□ -0.79
RAD51B-208ENST00000479335 STK39Q9UEW8 545 aa10.14□□□□□ -0.79
RAD51B-208ENST00000479335 ERI2A8K979 691 aaKnown RBP10.13□□□□□ -0.79
RAD51B-208ENST00000479335 RNF103O00237 685 aa10.13□□□□□ -0.79
RAD51B-208ENST00000479335 STK25O00506 426 aa10.13□□□□□ -0.79
RAD51B-208ENST00000479335 KIAA0355O15063 1070 aa10.13□□□□□ -0.79
RAD51B-208ENST00000479335 UPP2O95045 317 aa10.13□□□□□ -0.79
RAD51B-208ENST00000479335 VNN2O95498 520 aa10.13□□□□□ -0.79
RAD51B-208ENST00000479335 CHRM1P11229 460 aaPredicted RBP10.13□□□□□ -0.79
RAD51B-208ENST00000479335 CCNCP24863 283 aa10.13□□□□□ -0.79
RAD51B-208ENST00000479335 GARSP41250 739 aaKnown RBP10.13□□□□□ -0.79
RAD51B-208ENST00000479335 ELK3P41970 407 aa10.13□□□□□ -0.79
RAD51B-208ENST00000479335 SLC18A1P54219 525 aa10.13□□□□□ -0.79
RAD51B-208ENST00000479335 TBX4P57082 545 aa10.13□□□□□ -0.79
RAD51B-208ENST00000479335 GUCY1A3Q02108 690 aa10.13□□□□□ -0.79
RAD51B-208ENST00000479335 GAD2Q05329 585 aa10.13□□□□□ -0.79
RAD51B-208ENST00000479335 RING1Q06587 406 aa10.13□□□□□ -0.79
RAD51B-208ENST00000479335 WASHC5Q12768 1159 aa10.13□□□□□ -0.79
RAD51B-208ENST00000479335 TRIP4Q15650 581 aaPredicted RBP10.13□□□□□ -0.79
RAD51B-208ENST00000479335 PSMD5Q16401 504 aa10.13□□□□□ -0.79
RAD51B-208ENST00000479335 SKIDA1Q1XH10 827 aa10.13□□□□□ -0.79
RAD51B-208ENST00000479335 MGAT5BQ3V5L5 792 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms