RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 PNISRQ8TF01 805 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 TMEM171Q8WVE6 324 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 WDR24Q96S15 920 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 MMS19Q96T76 1030 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 NUDT22Q9BRQ3 303 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 TRIM36Q9NQ86 728 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 GJD2Q9UKL4 321 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 SCAF8Q9UPN6 1271 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 SNX14Q9Y5W7 946 aa4.64□□□□□ -1.67
CDC42BPA-212ENST00000478573 C9orf84Q5VXU9 1444 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 VPS8Q8N3P4 1428 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 MLH3Q9UHC1 1453 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 MYMKA6NI61 221 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 TMEM232C9JQI7 657 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 IRAK2O43187 625 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 FAM155BO75949 473 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 TJP3O95049 919 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 VIPP01282 170 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 PRKCBP05771 671 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 ATP5F1P24539 256 aaPredicted RBP4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 CST5P28325 142 aaPredicted RBP4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 RBL1P28749 1068 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 GATMP50440 423 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 PGDP52209 483 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 ALDH18A1P54886 795 aaKnown RBP4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 CLCA4Q14CN2 919 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 GPR162Q16538 588 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 CYP1B1Q16678 543 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 TRIM60Q495X7 471 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 RNASE12Q5GAN4 147 aaKnown RBP4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 RUSC1-AS1Q66K80 236 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 MTHFD1LQ6UB35 978 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 CYP26C1Q6V0L0 522 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 MRPL10Q7Z7H8 261 aaKnown RBP4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 RASGRP3Q8IV61 690 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 IZUMO1Q8IYV9 350 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 SPPL3Q8TCT6 385 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 ABHD5Q8WTS1 349 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 WASF1Q92558 559 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 CUL5Q93034 780 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 HIST1H2AAQ96QV6 131 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 PRR25Q96S07 402 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 THAP7Q9BT49 309 aaPredicted RBP4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 DDX23Q9BUQ8 820 aaKnown RBP4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 VN1R3Q9BXE9 311 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 UBA5Q9GZZ9 404 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 PRDM8Q9NQV8 689 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 ZNF69Q9UC07 566 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 GABRQQ9UN88 632 aa4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 RNF17Q9BXT8 1623 aaKnown RBP4.63□□□□□ -1.67
CDC42BPA-212ENST00000478573 CLTCQ00610 1675 aaKnown RBP4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 AGPSO00116 658 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 CES2O00748 559 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 FCHO1O14526 889 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 INSIG1O15503 277 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 SNX2O60749 519 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 CBFA2T3O75081 653 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 ACTL6BO94805 426 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 FGBP02675 491 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 SCP2P22307 547 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 HTR7P34969 479 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 PNLIPRP1P54315 467 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 TIRAPP58753 221 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 FHL3Q13643 280 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 EFR3AQ14156 821 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 FAM187BQ17R55 369 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 SULT6B1Q6IMI4 303 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 SLC44A2Q8IWA5 706 aaPredicted RBP4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 NRSN1Q8IZ57 195 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 SIRT6Q8N6T7 355 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 OR1N1Q8NGS0 311 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 RSPRY1Q96DX4 576 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 TBATAQ96M53 351 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 TMEM79Q9BSE2 394 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 C17orf80Q9BSJ5 609 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 RTKNQ9BST9 563 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 MAF1Q9H063 256 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 PABPC3Q9H361 631 aaKnown RBP4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 EBF3Q9H4W6 596 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 SAYSD1Q9NPB0 183 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 ITM2CQ9NQX7 267 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 LPAR3Q9UBY5 353 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 SRP68Q9UHB9 627 aaKnown RBP4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 RIMKLBQ9ULI2 386 aa4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 LRRFIP2Q9Y608 721 aaKnown RBP4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 POLR1AO95602 1720 aaPredicted RBP4.62□□□□□ -1.67
CDC42BPA-212ENST00000478573 DNMT1P26358 1616 aaKnown RBP4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 PSMD9O00233 223 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 RNF8O76064 485 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 ANXA6P08133 673 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 SRGAP2BP0DMP2 458 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 CBSLP0DN79 551 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 CBSP35520 551 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 AP2B1P63010 937 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 GHRHRQ02643 423 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 ACOX1Q15067 660 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 FBXO47Q5MNV8 452 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 KLHL17Q6TDP4 642 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 IRF2BP2Q7Z5L9 587 aa4.61□□□□□ -1.67
CDC42BPA-212ENST00000478573 SUGP1Q8IWZ8 645 aaKnown RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms