RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 RAPGEF5Q92565 580 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 ALG3Q92685 438 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 EPAS1Q99814 870 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 TLR10Q9BXR5 811 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 LINC00597Q9H2U6 94 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 PCDH18Q9HCL0 1135 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 DUS2Q9NX74 493 aaKnown RBP16.73■□□□□ 0.27
VHL-203ENST00000477538 VANGL2Q9ULK5 521 aa16.73■□□□□ 0.27
VHL-203ENST00000477538 E9PAM4 449 aa16.72■□□□□ 0.27
VHL-203ENST00000477538 FAM72CH0Y354 149 aa16.72■□□□□ 0.27
VHL-203ENST00000477538 TRDMT1O14717 391 aaKnown RBP16.72■□□□□ 0.27
VHL-203ENST00000477538 CREB3O43889 395 aa16.72■□□□□ 0.27
VHL-203ENST00000477538 SRGAP2O75044 1071 aa16.72■□□□□ 0.27
VHL-203ENST00000477538 KDELR1P24390 212 aa16.72■□□□□ 0.27
VHL-203ENST00000477538 ARSEP51690 589 aa16.72■□□□□ 0.27
VHL-203ENST00000477538 FAM72AQ5TYM5 149 aa16.72■□□□□ 0.27
VHL-203ENST00000477538 FAM72DQ6L9T8 149 aa16.72■□□□□ 0.27
VHL-203ENST00000477538 FBXL22Q6P050 247 aa16.72■□□□□ 0.27
VHL-203ENST00000477538 LRRC31Q6UY01 552 aa16.72■□□□□ 0.27
VHL-203ENST00000477538 C14orf80Q86SX3 495 aa16.72■□□□□ 0.27
VHL-203ENST00000477538 FAM72BQ86X60 149 aa16.72■□□□□ 0.27
VHL-203ENST00000477538 MAP7D3Q8IWC1 876 aa16.72■□□□□ 0.27
VHL-203ENST00000477538 EXD1Q8NHP7 514 aa16.72■□□□□ 0.27
VHL-203ENST00000477538 FAM71BQ8TC56 605 aa16.72■□□□□ 0.27
VHL-203ENST00000477538 RSAD2Q8WXG1 361 aa16.72■□□□□ 0.27
VHL-203ENST00000477538 ASIC4Q96FT7 647 aa16.72■□□□□ 0.27
VHL-203ENST00000477538 RPP25Q9BUL9 199 aaKnown RBP16.72■□□□□ 0.27
VHL-203ENST00000477538 LIMD1Q9UGP4 676 aa16.72■□□□□ 0.27
VHL-203ENST00000477538 LOC730098B7Z3J9 87 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 H3BRJ5 948 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 EEF2KO00418 725 aaKnown RBP16.71■□□□□ 0.27
VHL-203ENST00000477538 TSPAN3O60637 253 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 LRIG2O94898 1065 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 ZRANB2O95218 330 aaKnown RBP eCLIP16.71■□□□□ 0.27
VHL-203ENST00000477538 ATP1A1P05023 1023 aaKnown RBP16.71■□□□□ 0.27
VHL-203ENST00000477538 CD48P09326 243 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 ARL4AP40617 200 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 ZNF135P52742 658 aaPredicted RBP16.71■□□□□ 0.27
VHL-203ENST00000477538 TPI1P60174 286 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 DPYSL3Q14195 570 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 PDGFRLQ15198 375 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 EML3Q32P44 896 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 RABGAP1LQ5R372 815 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 MANEALQ5VSG8 457 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 SYT10Q6XYQ8 523 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 CCDC50Q8IVM0 306 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 ADHFE1Q8IWW8 467 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 ZNF683Q8IZ20 524 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 RCOR2Q8IZ40 523 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 NXPE3Q969Y0 559 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 RNF25Q96BH1 459 aaPredicted RBP16.71■□□□□ 0.27
VHL-203ENST00000477538 TBC1D31Q96DN5 1066 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 MYEOVQ96EZ4 313 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 RBM41Q96IZ5 413 aaKnown RBP16.71■□□□□ 0.27
VHL-203ENST00000477538 ZFYVE19Q96K21 471 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 PRICKLE1Q96MT3 831 aaPredicted RBP16.71■□□□□ 0.27
VHL-203ENST00000477538 RPRD1AQ96P16 312 aaPredicted RBP16.71■□□□□ 0.27
VHL-203ENST00000477538 NAPGQ99747 312 aaPredicted RBP16.71■□□□□ 0.27
VHL-203ENST00000477538 FAM83CQ9BQN1 747 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 TRMT61BQ9BVS5 477 aaKnown RBP16.71■□□□□ 0.27
VHL-203ENST00000477538 CALN1Q9BXU9 219 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 KCNK12Q9HB15 430 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 CWC15Q9P013 229 aaKnown RBP16.71■□□□□ 0.27
VHL-203ENST00000477538 IGSF9Q9P2J2 1179 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 RCOR3Q9P2K3 495 aaPredicted RBP16.71■□□□□ 0.27
VHL-203ENST00000477538 PRKAG3Q9UGI9 489 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 DNAI1Q9UI46 699 aa16.71■□□□□ 0.27
VHL-203ENST00000477538 XIRP2A4UGR9 3374 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 MYO18AQ92614 2054 aaKnown RBP16.7■□□□□ 0.26
VHL-203ENST00000477538 IGLV3-10A0A075B6K4 115 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 TYW5A2RUC4 315 aaKnown RBP16.7■□□□□ 0.26
VHL-203ENST00000477538 CTAGE9A4FU28 777 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 C3orf70A6NLC5 250 aaPredicted RBP16.7■□□□□ 0.26
VHL-203ENST00000477538 ESPNB1AK53 854 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 GFRA2O00451 464 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 CHADO15335 359 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 NFATC1O95644 943 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 GOT1P17174 413 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 GDI1P31150 447 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 HTR7P34969 479 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 SGSHP51688 502 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 MMRN1Q13201 1228 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 ARTNQ5T4W7 220 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 DCAF12L1Q5VU92 463 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 TRIM68Q6AZZ1 485 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 RWDD4Q6NW29 188 aaKnown RBP16.7■□□□□ 0.26
VHL-203ENST00000477538 MFSD7Q6UXD7 560 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 TPGS1Q6ZTW0 290 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 ADGRG2Q8IZP9 1017 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 HJURPQ8NCD3 748 aaPredicted RBP16.7■□□□□ 0.26
VHL-203ENST00000477538 ATXN2LQ8WWM7 1075 aaKnown RBP16.7■□□□□ 0.26
VHL-203ENST00000477538 TSC1Q92574 1164 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 ATP2A3Q93084 1043 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 IGSF8Q969P0 613 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 PSMB7Q99436 277 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 ZNF670Q9BS34 389 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 SPHK2Q9NRA0 654 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 PPARGC1AQ9UBK2 798 aaKnown RBP16.7■□□□□ 0.26
VHL-203ENST00000477538 NEU3Q9UQ49 428 aa16.7■□□□□ 0.26
VHL-203ENST00000477538 SPTBN5Q9NRC6 3674 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms