RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 E9PAM4 449 aa29.76■■■□□ 2.35
VEGFA-211ENST00000476772 RFPL2O75678 378 aa29.76■■■□□ 2.35
VEGFA-211ENST00000476772 C1RP00736 705 aa29.76■■■□□ 2.35
VEGFA-211ENST00000476772 ETS1P14921 441 aa29.76■■■□□ 2.35
VEGFA-211ENST00000476772 ECHS1P30084 290 aa29.76■■■□□ 2.35
VEGFA-211ENST00000476772 VPS41P49754 854 aa29.76■■■□□ 2.35
VEGFA-211ENST00000476772 DRG2P55039 364 aaKnown RBP29.76■■■□□ 2.35
VEGFA-211ENST00000476772 HLTFQ14527 1009 aaKnown RBP eCLIP29.76■■■□□ 2.356e-8■■□□□ 12.7
VEGFA-211ENST00000476772 NUGGCQ68CJ6 796 aa29.76■■■□□ 2.35
VEGFA-211ENST00000476772 RWDD4Q6NW29 188 aaKnown RBP29.76■■■□□ 2.35
VEGFA-211ENST00000476772 NETO2Q8NC67 525 aa29.76■■■□□ 2.35
VEGFA-211ENST00000476772 TBC1D31Q96DN5 1066 aa29.76■■■□□ 2.35
VEGFA-211ENST00000476772 TRPC7Q9HCX4 862 aa29.76■■■□□ 2.35
VEGFA-211ENST00000476772 ZSCAN5DPP0CG00 497 aa29.75■■■□□ 2.35
VEGFA-211ENST00000476772 HOXC13P31276 330 aa29.75■■■□□ 2.35
VEGFA-211ENST00000476772 HTR7P34969 479 aa29.75■■■□□ 2.35
VEGFA-211ENST00000476772 MAP9Q49MG5 647 aa29.75■■■□□ 2.35
VEGFA-211ENST00000476772 RTL10Q7L3V2 364 aa29.75■■■□□ 2.35
VEGFA-211ENST00000476772 ADGRD2Q7Z7M1 963 aa29.75■■■□□ 2.35
VEGFA-211ENST00000476772 RBM23Q86U06 439 aaKnown RBP29.75■■■□□ 2.35
VEGFA-211ENST00000476772 GDPD5Q8WTR4 605 aa29.75■■■□□ 2.35
VEGFA-211ENST00000476772 LRRN4Q8WUT4 740 aa29.75■■■□□ 2.35
VEGFA-211ENST00000476772 RSAD2Q8WXG1 361 aa29.75■■■□□ 2.35
VEGFA-211ENST00000476772 OLFM3Q96PB7 478 aa29.75■■■□□ 2.35
VEGFA-211ENST00000476772 CORO1BQ9BR76 489 aa29.75■■■□□ 2.35
VEGFA-211ENST00000476772 NEUROG2Q9H2A3 272 aa29.75■■■□□ 2.35
VEGFA-211ENST00000476772 ARFGAP3Q9NP61 516 aa29.75■■■□□ 2.35
VEGFA-211ENST00000476772 GRHL1Q9NZI5 618 aa29.75■■■□□ 2.35
VEGFA-211ENST00000476772 IFNB1P01574 187 aa29.74■■■□□ 2.35
VEGFA-211ENST00000476772 CYP4F8P98187 520 aa29.74■■■□□ 2.35
VEGFA-211ENST00000476772 BEND6Q5SZJ8 279 aaPredicted RBP29.74■■■□□ 2.35
VEGFA-211ENST00000476772 TXNDC8Q6A555 127 aa29.74■■■□□ 2.35
VEGFA-211ENST00000476772 AENQ8WTP8 325 aaKnown RBP29.74■■■□□ 2.35
VEGFA-211ENST00000476772 ASAH2Q9NR71 780 aa29.74■■■□□ 2.35
VEGFA-211ENST00000476772 DENND4CQ5VZ89 1909 aa29.74■■■□□ 2.35
VEGFA-211ENST00000476772 COG7P83436 770 aa29.73■■■□□ 2.35
VEGFA-211ENST00000476772 XRCC4Q13426 336 aa29.73■■■□□ 2.35
VEGFA-211ENST00000476772 NPWQ8N729 165 aa29.73■■■□□ 2.35
VEGFA-211ENST00000476772 CCDC89Q8N998 374 aa29.73■■■□□ 2.35
VEGFA-211ENST00000476772 EIF1ADQ8N9N8 165 aaKnown RBP29.73■■■□□ 2.35
VEGFA-211ENST00000476772 FAM71DQ8N9W8 422 aa29.73■■■□□ 2.35
VEGFA-211ENST00000476772 SLC22A12Q96S37 553 aa29.73■■■□□ 2.35
VEGFA-211ENST00000476772 SLC28A3Q9HAS3 691 aa29.73■■■□□ 2.35
VEGFA-211ENST00000476772 GKN1Q9NS71 199 aa29.73■■■□□ 2.35
VEGFA-211ENST00000476772 HCFC1R1Q9NWW0 138 aa29.73■■■□□ 2.35
VEGFA-211ENST00000476772 VANGL2Q9ULK5 521 aa29.73■■■□□ 2.35
VEGFA-211ENST00000476772 EPOPA6NHQ4 379 aa29.72■■■□□ 2.35
VEGFA-211ENST00000476772 MYL4P12829 197 aa29.72■■■□□ 2.35
VEGFA-211ENST00000476772 IVDP26440 423 aa29.72■■■□□ 2.35
VEGFA-211ENST00000476772 AUHQ13825 339 aaKnown RBP29.72■■■□□ 2.35
VEGFA-211ENST00000476772 RAP1GAP2Q684P5 730 aa29.72■■■□□ 2.35
VEGFA-211ENST00000476772 BZW1Q7L1Q6 419 aaKnown RBP29.72■■■□□ 2.35
VEGFA-211ENST00000476772 CDKL3Q8IVW4 592 aaPredicted RBP29.72■■■□□ 2.35
VEGFA-211ENST00000476772 ZNF683Q8IZ20 524 aa29.72■■■□□ 2.35
VEGFA-211ENST00000476772 MRPS31Q92665 395 aaKnown RBP29.72■■■□□ 2.35
VEGFA-211ENST00000476772 PLD4Q96BZ4 506 aa29.72■■■□□ 2.35
VEGFA-211ENST00000476772 CYP2S1Q96SQ9 504 aa29.72■■■□□ 2.35
VEGFA-211ENST00000476772 KLF16Q9BXK1 252 aaPredicted RBP29.72■■■□□ 2.35
VEGFA-211ENST00000476772 PCDH9Q9HC56 1237 aa29.72■■■□□ 2.35
VEGFA-211ENST00000476772 HCFC2Q9Y5Z7 792 aa29.72■■■□□ 2.35
VEGFA-211ENST00000476772 BCLAF3A2AJT9 711 aaKnown RBP29.72■■■□□ 2.35
VEGFA-211ENST00000476772 NRG2O14511 850 aaPredicted RBP29.72■■■□□ 2.35
VEGFA-211ENST00000476772 MBL2P11226 248 aaPredicted RBP29.72■■■□□ 2.35
VEGFA-211ENST00000476772 RBL1P28749 1068 aa29.72■■■□□ 2.35
VEGFA-211ENST00000476772 ADCY8P40145 1251 aa29.72■■■□□ 2.35
VEGFA-211ENST00000476772 SLC45A4Q5BKX6 768 aa29.72■■■□□ 2.35
VEGFA-211ENST00000476772 TP53INP2Q8IXH6 220 aa29.72■■■□□ 2.35
VEGFA-211ENST00000476772 QKIQ96PU8 341 aaKnown RBP eCLIP29.72■■■□□ 2.35
VEGFA-211ENST00000476772 LMAN2LQ9H0V9 348 aa29.72■■■□□ 2.35
VEGFA-211ENST00000476772 USP29Q9HBJ7 922 aa29.72■■■□□ 2.35
VEGFA-211ENST00000476772 A0A1W2PRU2 124 aa29.71■■■□□ 2.35
VEGFA-211ENST00000476772 FGF10O15520 208 aaPredicted RBP29.71■■■□□ 2.35
VEGFA-211ENST00000476772 STC2O76061 302 aa29.71■■■□□ 2.35
VEGFA-211ENST00000476772 CDC25CP30307 473 aa29.71■■■□□ 2.35
VEGFA-211ENST00000476772 HOXA9P31269 272 aa29.71■■■□□ 2.35
VEGFA-211ENST00000476772 NRLP54845 237 aa29.71■■■□□ 2.35
VEGFA-211ENST00000476772 MTA1Q13330 715 aa29.71■■■□□ 2.35
VEGFA-211ENST00000476772 NADSYN1Q6IA69 706 aa29.71■■■□□ 2.35
VEGFA-211ENST00000476772 ZDHHC24Q6UX98 284 aa29.71■■■□□ 2.35
VEGFA-211ENST00000476772 PDZD4Q76G19 769 aaPredicted RBP29.71■■■□□ 2.35
VEGFA-211ENST00000476772 ARL14EPQ8N8R7 260 aaPredicted RBP29.71■■■□□ 2.35
VEGFA-211ENST00000476772 CCHCR1Q8TD31 782 aa29.71■■■□□ 2.35
VEGFA-211ENST00000476772 SNF8Q96H20 258 aa29.71■■■□□ 2.35
VEGFA-211ENST00000476772 PRMT1Q99873 361 aaKnown RBP29.71■■■□□ 2.35
VEGFA-211ENST00000476772 ATXN3LQ9H3M9 355 aa29.71■■■□□ 2.35
VEGFA-211ENST00000476772 CATSPERBQ9H7T0 1116 aa29.71■■■□□ 2.35
VEGFA-211ENST00000476772 KCNN4O15554 427 aa29.7■■■□□ 2.35
VEGFA-211ENST00000476772 OLFM2O95897 454 aa29.7■■■□□ 2.35
VEGFA-211ENST00000476772 FAM153BP0C7A2 387 aa29.7■■■□□ 2.35
VEGFA-211ENST00000476772 IRF1P10914 325 aa29.7■■■□□ 2.35
VEGFA-211ENST00000476772 GJA1P17302 382 aa29.7■■■□□ 2.35
VEGFA-211ENST00000476772 STIP1P31948 543 aaKnown RBP29.7■■■□□ 2.35
VEGFA-211ENST00000476772 BMP8BP34820 402 aa29.7■■■□□ 2.35
VEGFA-211ENST00000476772 SERPINB6P35237 376 aa29.7■■■□□ 2.35
VEGFA-211ENST00000476772 HARS2P49590 506 aaKnown RBP29.7■■■□□ 2.35
VEGFA-211ENST00000476772 FAM153CQ494X1 144 aa29.7■■■□□ 2.35
VEGFA-211ENST00000476772 ZFRQ96KR1 1074 aaKnown RBP29.7■■■□□ 2.35
VEGFA-211ENST00000476772 GDAP1L1Q96MZ0 367 aa29.7■■■□□ 2.35
VEGFA-211ENST00000476772 GCNAQ96QF7 691 aa29.7■■■□□ 2.35
VEGFA-211ENST00000476772 ZDHHC18Q9NUE0 388 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms