RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 AKAP1Q92667 903 aaKnown RBP eCLIP6.63□□□□□ -1.35
VPS50-212ENST00000476413 REPS1Q96D71 796 aa6.63□□□□□ -1.35
VPS50-212ENST00000476413 PAIP1Q9H074 479 aaKnown RBP6.63□□□□□ -1.35
VPS50-212ENST00000476413 CLPBQ9H078 707 aa6.63□□□□□ -1.35
VPS50-212ENST00000476413 MTMR4Q9NYA4 1195 aa6.63□□□□□ -1.35
VPS50-212ENST00000476413 TBX20Q9UMR3 447 aa6.63□□□□□ -1.35
VPS50-212ENST00000476413 B3GNT3Q9Y2A9 372 aa6.63□□□□□ -1.35
VPS50-212ENST00000476413 SPATA31A1Q5TZJ5 1347 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 CCDC196A0A1B0GTZ2 297 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 TCRBV5S1A1TA0A578 114 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 MT-CO3P00414 261 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 ALDOAP04075 364 aaKnown RBP6.62□□□□□ -1.35
VPS50-212ENST00000476413 PCP4P48539 62 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 RARRES1P49788 294 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 CCT4P50991 539 aaKnown RBP6.62□□□□□ -1.35
VPS50-212ENST00000476413 CDK18Q07002 472 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 MFSD13AQ14CX5 517 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 HYIQ5T013 277 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 DENND1BQ6P3S1 775 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 SLC39A5Q6ZMH5 540 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 PCGF5Q86SE9 256 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 ADGRF3Q8IZF5 1079 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 EXD3Q8N9H8 876 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 LSM14AQ8ND56 463 aaKnown RBP6.62□□□□□ -1.35
VPS50-212ENST00000476413 STAMQ92783 540 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 ZBTB10Q96DT7 871 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 MASTLQ96GX5 879 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 PPP1R10Q96QC0 940 aaKnown RBP6.62□□□□□ -1.35
VPS50-212ENST00000476413 ZNF341Q9BYN7 854 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 ZHX3Q9H4I2 956 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 STN1Q9H668 368 aaKnown RBP6.62□□□□□ -1.35
VPS50-212ENST00000476413 SMC4Q9NTJ3 1288 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 ADAM21Q9UKJ8 722 aa6.62□□□□□ -1.35
VPS50-212ENST00000476413 NPIPB13A6NJU9 1138 aa6.61□□□□□ -1.35
VPS50-212ENST00000476413 NPIPB5A8MRT5 1133 aa6.61□□□□□ -1.35
VPS50-212ENST00000476413 NPIPB4C9JG80 1138 aa6.61□□□□□ -1.35
VPS50-212ENST00000476413 ADRB1P08588 477 aa6.61□□□□□ -1.35
VPS50-212ENST00000476413 AVPR2P30518 371 aa6.61□□□□□ -1.35
VPS50-212ENST00000476413 SLC8A1P32418 973 aa6.61□□□□□ -1.35
VPS50-212ENST00000476413 SLC37A1P57057 533 aa6.61□□□□□ -1.35
VPS50-212ENST00000476413 GALNT2Q10471 571 aa6.61□□□□□ -1.35
VPS50-212ENST00000476413 CRIP3Q6Q6R5 217 aa6.61□□□□□ -1.35
VPS50-212ENST00000476413 RASAL3Q86YV0 1011 aa6.61□□□□□ -1.35
VPS50-212ENST00000476413 TCP11L2Q8N4U5 519 aa6.61□□□□□ -1.35
VPS50-212ENST00000476413 SLC9A6Q92581 669 aa6.61□□□□□ -1.35
VPS50-212ENST00000476413 ZUFSPQ96AP4 578 aa6.61□□□□□ -1.35
VPS50-212ENST00000476413 PREBQ9HCU5 417 aa6.61□□□□□ -1.35
VPS50-212ENST00000476413 CD207Q9UJ71 328 aa6.61□□□□□ -1.35
VPS50-212ENST00000476413 GDAQ9Y2T3 454 aa6.61□□□□□ -1.35
VPS50-212ENST00000476413 ENTPD2Q9Y5L3 495 aa6.61□□□□□ -1.35
VPS50-212ENST00000476413 FAM90A7PA6NKC0 464 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 FAM90A22PA8MWA6 464 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 FAM90A12PA8MX19 464 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 FAM90A23PA8MXZ1 464 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 CLIC1O00299 241 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 MATN3O15232 486 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 EXOC3O60645 756 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 ADH4P08319 380 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 BDNFP23560 247 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 PRPH2P23942 346 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 HOXD12P35452 270 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 KRT9P35527 623 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 PSMC2P35998 433 aaKnown RBP6.6□□□□□ -1.35
VPS50-212ENST00000476413 ZNF84P51523 738 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 SHC2P98077 582 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 B4GALNT1Q00973 533 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 DMWDQ09019 674 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 BAK1Q16611 211 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 GPATCH4Q5T3I0 446 aaKnown RBP6.6□□□□□ -1.35
VPS50-212ENST00000476413 LIPMQ5VYY2 423 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 FAAH2Q6GMR7 532 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 ACAD10Q6JQN1 1059 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 ZNF804AQ7Z570 1209 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 ANKRD44Q8N8A2 993 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 TBC1D22AQ8WUA7 517 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 RFFLQ8WZ73 363 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 ZNF845Q96IR2 970 aaPredicted RBP6.6□□□□□ -1.35
VPS50-212ENST00000476413 GPR78Q96P69 363 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 GATA5Q9BWX5 397 aaPredicted RBP6.6□□□□□ -1.35
VPS50-212ENST00000476413 ADGRE3Q9BY15 652 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 OSBPL5Q9H0X9 879 aaPredicted RBP6.6□□□□□ -1.35
VPS50-212ENST00000476413 TOR3AQ9H497 397 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 PRDM13Q9H4Q3 707 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 ACAD9Q9H845 621 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 TERF2IPQ9NYB0 399 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 ARHGAP26Q9UNA1 814 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 CYP46A1Q9Y6A2 500 aa6.6□□□□□ -1.35
VPS50-212ENST00000476413 KAT6AQ92794 2004 aa6.59□□□□□ -1.35
VPS50-212ENST00000476413 PEX12O00623 359 aa6.59□□□□□ -1.35
VPS50-212ENST00000476413 RFPL3SP0C7P2 107 aa6.59□□□□□ -1.35
VPS50-212ENST00000476413 CYP2D6P10635 497 aa6.59□□□□□ -1.35
VPS50-212ENST00000476413 INSRRP14616 1297 aa6.59□□□□□ -1.35
VPS50-212ENST00000476413 ARSAP15289 507 aa6.59□□□□□ -1.35
VPS50-212ENST00000476413 ABCD3P28288 659 aa6.59□□□□□ -1.35
VPS50-212ENST00000476413 LARS2Q15031 903 aaKnown RBP6.59□□□□□ -1.35
VPS50-212ENST00000476413 CNGA3Q16281 694 aa6.59□□□□□ -1.35
VPS50-212ENST00000476413 PRICKLE4Q2TBC4 344 aa6.59□□□□□ -1.35
VPS50-212ENST00000476413 TMEM88Q6PEY1 159 aa6.59□□□□□ -1.35
VPS50-212ENST00000476413 DCDC5Q6ZRR9 648 aa6.59□□□□□ -1.35
VPS50-212ENST00000476413 SLC29A4Q7RTT9 530 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms