RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 SLFN11Q7Z7L1 901 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 OR6J1Q8NGC5 347 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 LMO3Q8TAP4 145 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 INPP5DQ92835 1189 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 SCLYQ96I15 445 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 SEPHS2Q99611 448 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 MRPL45Q9BRJ2 306 aaKnown RBP5.12□□□□□ -1.59
CCDC39-204ENST00000476379 LRRC19Q9H756 370 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 TRMT13Q9NUP7 481 aaKnown RBP5.12□□□□□ -1.59
CCDC39-204ENST00000476379 DONSONQ9NYP3 566 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 GIMAP2Q9UG22 337 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 C19orf81C9J6K1 198 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 GPR25O00155 361 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 GIPC1O14908 333 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 EDF1O60869 148 aaKnown RBP5.12□□□□□ -1.59
CCDC39-204ENST00000476379 DNAJC8O75937 253 aaPredicted RBP5.12□□□□□ -1.59
CCDC39-204ENST00000476379 SUPT7LO94864 414 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 OR6B1O95007 311 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 USP17L7P0C7H9 530 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 FGFR1P11362 822 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 PCNAP12004 261 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 GM2AP17900 193 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 MAGP20916 626 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 PMLP29590 882 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 GPX6P59796 221 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 SLC20A2Q08357 652 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 BNIP1Q12981 228 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 MOGSQ13724 837 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 C6orf10Q5SRN2 563 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 PMF1Q6P1K2 205 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 C6orf89Q6UWU4 347 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 VSIG10LQ86VR7 867 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 DEFB106AQ8N104 65 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 RIBC1Q8N443 379 aaPredicted RBP5.12□□□□□ -1.59
CCDC39-204ENST00000476379 ZCCHC9Q8N567 271 aaKnown RBP5.12□□□□□ -1.59
CCDC39-204ENST00000476379 DNAJB3Q8WWF6 145 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 SYT15Q9BQS2 421 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 BTBD10Q9BSF8 475 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 UNC93B1Q9H1C4 597 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 CXCL16Q9H2A7 254 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 YY1AP1Q9H869 796 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 TMEM165Q9HC07 324 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 TAS2R1Q9NYW7 299 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 BFARQ9NZS9 450 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 TUBGCP4Q9UGJ1 667 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 EGFL7Q9UHF1 273 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 ATP11BQ9Y2G3 1177 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 CHD9Q3L8U1 2897 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 DDX60LQ5H9U9 1706 aaKnown RBP5.12□□□□□ -1.59
CCDC39-204ENST00000476379 TK2O00142 265 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 EEF2KO00418 725 aaKnown RBP5.12□□□□□ -1.59
CCDC39-204ENST00000476379 DHX15O43143 795 aaKnown RBP5.12□□□□□ -1.59
CCDC39-204ENST00000476379 METTL18O95568 372 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 HNRNPCP07910 306 aaKnown RBP eCLIP5.12□□□□□ -1.59
CCDC39-204ENST00000476379 IRF1P10914 325 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 LMO2P25791 158 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 RPL10P27635 214 aaKnown RBP5.12□□□□□ -1.59
CCDC39-204ENST00000476379 PEX2P28328 305 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 COPAP53621 1224 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 CAV1Q03135 178 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 NOGQ13253 232 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 SEMA5AQ13591 1074 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 LRRC23Q53EV4 343 aaPredicted RBP5.12□□□□□ -1.59
CCDC39-204ENST00000476379 FKBP1CQ5VVH2 108 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 PPP1R2P3Q6NXS1 205 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 ST13P4Q8IZP2 240 aaPredicted RBP5.12□□□□□ -1.59
CCDC39-204ENST00000476379 ALLCQ8N6M5 410 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 BLOC1S5Q8TDH9 187 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 TMEM176AQ96HP8 235 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 CDHR1Q96JP9 859 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 MPHOSPH6Q99547 160 aaKnown RBP5.12□□□□□ -1.59
CCDC39-204ENST00000476379 CGRRF1Q99675 332 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 NPAS2Q99743 824 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 HAPLN2Q9GZV7 340 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 NXF3Q9H4D5 531 aaKnown RBP5.12□□□□□ -1.59
CCDC39-204ENST00000476379 KRT82Q9NSB4 513 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 STRIP2Q9ULQ0 834 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 RUVBL2Q9Y230 463 aaKnown RBP5.12□□□□□ -1.59
CCDC39-204ENST00000476379 PSAT1Q9Y617 370 aa5.12□□□□□ -1.59
CCDC39-204ENST00000476379 A0A0U1RQS6 177 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 RNF103O00237 685 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 PSTPIP1O43586 416 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 B3GAT3O94766 335 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 PSMG1O95456 288 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 CHRNGP07510 517 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 RALBP11234 206 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 SMPD1P17405 629 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 TNFRSF8P28908 595 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 GGT5P36269 586 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 HADHAP40939 763 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 SLC1A6P48664 564 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 MARSP56192 900 aaKnown RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 IRF9Q00978 393 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 SEMA3FQ13275 785 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 OASLQ15646 514 aaKnown RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 ZIK1Q3SY52 487 aaPredicted RBP5.11□□□□□ -1.59
CCDC39-204ENST00000476379 HYIQ5T013 277 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 PDPK2PQ6A1A2 396 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 ZNF662Q6ZS27 426 aa5.11□□□□□ -1.59
CCDC39-204ENST00000476379 MON1BQ7L1V2 547 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms