RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 KRT3P12035 628 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 MYL4P12829 197 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 TPSB2P20231 275 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 TGM2P21980 687 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 VARSP26640 1264 aaKnown RBP7.09□□□□□ -1.27
UBR4-212ENST00000475973 SERPINB3P29508 390 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 MIPP30301 263 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 ATICP31939 592 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 SCNN1AP37088 669 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 ELK3P41970 407 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 MAGEA12P43365 314 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 SEC13P55735 322 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 YWHAZP63104 245 aaKnown RBP7.09□□□□□ -1.27
UBR4-212ENST00000475973 XIAPP98170 497 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 ZNF200P98182 395 aaPredicted RBP7.09□□□□□ -1.27
UBR4-212ENST00000475973 ARHGAP1Q07960 439 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 SF3A3Q12874 501 aaKnown RBP eCLIP7.09□□□□□ -1.279e-7■■■■■ 44.5
UBR4-212ENST00000475973 TPSAB1Q15661 275 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 LY6KQ17RY6 165 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 TRMT5Q32P41 509 aaKnown RBP7.09□□□□□ -1.27
UBR4-212ENST00000475973 KBTBD12Q3ZCT8 623 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 PLA2G2CQ5R387 149 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 TTC39BQ5VTQ0 682 aaPredicted RBP7.09□□□□□ -1.27
UBR4-212ENST00000475973 FOXB2Q5VYV0 432 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 TRNP1Q6NT89 227 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 CCDC62Q6P9F0 684 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 MTHFD1LQ6UB35 978 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 RINLQ6ZS11 566 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 DEFB128Q7Z7B8 93 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 PRPF39Q86UA1 669 aaKnown RBP7.09□□□□□ -1.27
UBR4-212ENST00000475973 RHPN2Q8IUC4 686 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 LMNTD2Q8IXW0 634 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 KBTBD2Q8IY47 623 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 GALNT15Q8N3T1 639 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 PQLC3Q8N755 202 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 LINC01465Q8N7H1 131 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 PLD5Q8N7P1 536 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 C7orf31Q8N865 590 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 ACMSDQ8TDX5 336 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 CENPIQ92674 756 aaPredicted RBP7.09□□□□□ -1.27
UBR4-212ENST00000475973 PRR11Q96HE9 360 aaPredicted RBP7.09□□□□□ -1.27
UBR4-212ENST00000475973 SCLYQ96I15 445 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 RNF157Q96PX1 679 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 PEBP4Q96S96 227 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 CPXM1Q96SM3 734 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 SLC9A7Q96T83 725 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 TBCBQ99426 244 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 CNPY3Q9BT09 278 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 MRPL4Q9BYD3 311 aaKnown RBP7.09□□□□□ -1.27
UBR4-212ENST00000475973 FAM192AQ9GZU8 254 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 PRDM16Q9HAZ2 1276 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 NPHS2Q9NP85 383 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 ZNF302Q9NR11 478 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 SMYD2Q9NRG4 433 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.09□□□□□ -1.273e-6■■■□□ 17.9
UBR4-212ENST00000475973 PAK5Q9P286 719 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 TCEAL9Q9UHQ7 104 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 KIAA1257Q9ULG3 409 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 TNFSF13BQ9Y275 285 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 PCDHB11Q9Y5F2 797 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 SZT2Q5T011 3432 aa7.09□□□□□ -1.27
UBR4-212ENST00000475973 ANK1P16157 1881 aa7.09□□□□□ -1.28
UBR4-212ENST00000475973 PLXNA1Q9UIW2 1896 aa7.09□□□□□ -1.28
UBR4-212ENST00000475973 SGK1O00141 431 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 NOP56O00567 594 aaKnown RBP7.08□□□□□ -1.28
UBR4-212ENST00000475973 ACKR2O00590 384 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 MDM4O15151 490 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 MED7O43513 233 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 LPXNO60711 386 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 FKBP6O75344 327 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 KRT36O76013 467 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 BAIAP3O94812 1187 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 F2P00734 622 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 ERBB2P04626 1255 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 BPGMP07738 259 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 SERPINA6P08185 405 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 MLNP12872 115 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 ATF7P17544 494 aaPredicted RBP7.08□□□□□ -1.28
UBR4-212ENST00000475973 UBA1P22314 1058 aaKnown RBP7.08□□□□□ -1.28
UBR4-212ENST00000475973 PSMA2P25787 234 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 CNTFP26441 200 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 TNFSF9P41273 254 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 SERPINB9P50453 376 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 EIF3EP60228 445 aaKnown RBP7.08□□□□□ -1.28
UBR4-212ENST00000475973 ROR2Q01974 943 aaKnown RBP7.08□□□□□ -1.28
UBR4-212ENST00000475973 BST1Q10588 318 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 NAB1Q13506 487 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 SEMA5AQ13591 1074 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 TFDP2Q14188 446 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 GRM2Q14416 872 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 GRIN2CQ14957 1233 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 KPNB1Q14974 876 aaKnown RBP7.08□□□□□ -1.28
UBR4-212ENST00000475973 PDK2Q15119 407 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 INSCQ1MX18 579 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 TSNAXIP1Q2TAA8 658 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 KAZNQ674X7 775 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 CWF19L1Q69YN2 538 aaKnown RBP7.08□□□□□ -1.28
UBR4-212ENST00000475973 DCUN1D2Q6PH85 259 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 LCLAT1Q6UWP7 414 aa7.08□□□□□ -1.28
UBR4-212ENST00000475973 LRRC74BQ6ZQY2 392 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms