RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 SYNCRIPO60506 623 aaKnown RBP19.26■□□□□ 0.67
COL7A1-209ENST00000474432 TRUB2O95900 331 aaKnown RBP19.26■□□□□ 0.67
COL7A1-209ENST00000474432 SERPINF2P08697 491 aa19.26■□□□□ 0.67
COL7A1-209ENST00000474432 DLDP09622 509 aaKnown RBP19.26■□□□□ 0.67
COL7A1-209ENST00000474432 KCNA4P22459 653 aa19.26■□□□□ 0.67
COL7A1-209ENST00000474432 LMAN2Q12907 356 aa19.26■□□□□ 0.67
COL7A1-209ENST00000474432 VWA3BQ502W6 1294 aa19.26■□□□□ 0.67
COL7A1-209ENST00000474432 HSP90AA4PQ58FG1 418 aa19.26■□□□□ 0.67
COL7A1-209ENST00000474432 DCAF6Q58WW2 860 aa19.26■□□□□ 0.67
COL7A1-209ENST00000474432 ZC3H12AQ5D1E8 599 aaKnown RBP19.26■□□□□ 0.67
COL7A1-209ENST00000474432 PSAPL1Q6NUJ1 521 aa19.26■□□□□ 0.67
COL7A1-209ENST00000474432 SLC47A2Q86VL8 602 aa19.26■□□□□ 0.67
COL7A1-209ENST00000474432 PASD1Q8IV76 773 aa19.26■□□□□ 0.67
COL7A1-209ENST00000474432 FAM71AQ8IYT1 594 aa19.26■□□□□ 0.67
COL7A1-209ENST00000474432 CFAP52Q8N1V2 620 aa19.26■□□□□ 0.67
COL7A1-209ENST00000474432 HJURPQ8NCD3 748 aaPredicted RBP19.26■□□□□ 0.67
COL7A1-209ENST00000474432 OR2T3Q8NH03 318 aa19.26■□□□□ 0.67
COL7A1-209ENST00000474432 TTC17Q96AE7 1141 aa19.26■□□□□ 0.67
COL7A1-209ENST00000474432 SIPA1Q96FS4 1042 aa19.26■□□□□ 0.67
COL7A1-209ENST00000474432 SLC2A13Q96QE2 648 aa19.26■□□□□ 0.67
COL7A1-209ENST00000474432 NUSAP1Q9BXS6 441 aaKnown RBP19.26■□□□□ 0.67
COL7A1-209ENST00000474432 NUP62CLQ9H1M0 184 aa19.26■□□□□ 0.67
COL7A1-209ENST00000474432 LHX5Q9H2C1 402 aa19.26■□□□□ 0.67
COL7A1-209ENST00000474432 SAMSN1Q9NSI8 373 aaKnown RBP19.26■□□□□ 0.67
COL7A1-209ENST00000474432 STIM2Q9P246 746 aa19.26■□□□□ 0.67
COL7A1-209ENST00000474432 MAP1BP46821 2468 aaKnown RBP19.26■□□□□ 0.67
COL7A1-209ENST00000474432 MAOBP27338 520 aa19.25■□□□□ 0.67
COL7A1-209ENST00000474432 E2F5Q15329 346 aa19.25■□□□□ 0.67
COL7A1-209ENST00000474432 DAB2IPQ5VWQ8 1189 aa19.25■□□□□ 0.67
COL7A1-209ENST00000474432 MMS22LQ6ZRQ5 1243 aa19.25■□□□□ 0.67
COL7A1-209ENST00000474432 DEFB106AQ8N104 65 aa19.25■□□□□ 0.67
COL7A1-209ENST00000474432 CEP76Q8TAP6 659 aa19.25■□□□□ 0.67
COL7A1-209ENST00000474432 DNASE2BQ8WZ79 361 aa19.25■□□□□ 0.67
COL7A1-209ENST00000474432 PRCCQ92733 491 aaPredicted RBP19.25■□□□□ 0.67
COL7A1-209ENST00000474432 PPP1R13BQ96KQ4 1090 aa19.25■□□□□ 0.67
COL7A1-209ENST00000474432 MRGPRX3Q96LB0 322 aa19.25■□□□□ 0.67
COL7A1-209ENST00000474432 PRMT1Q99873 361 aaKnown RBP19.25■□□□□ 0.67
COL7A1-209ENST00000474432 TUBGCP2Q9BSJ2 902 aa19.25■□□□□ 0.67
COL7A1-209ENST00000474432 MTG2Q9H4K7 406 aa19.25■□□□□ 0.67
COL7A1-209ENST00000474432 PRSS16Q9NQE7 514 aa19.25■□□□□ 0.67
COL7A1-209ENST00000474432 KCNU1A8MYU2 1149 aa19.24■□□□□ 0.67
COL7A1-209ENST00000474432 CAPN9O14815 690 aa19.24■□□□□ 0.67
COL7A1-209ENST00000474432 NDUFS2O75306 463 aa19.24■□□□□ 0.67
COL7A1-209ENST00000474432 MOCS2O96007 188 aaPredicted RBP19.24■□□□□ 0.67
COL7A1-209ENST00000474432 ERBB2P04626 1255 aa19.24■□□□□ 0.67
COL7A1-209ENST00000474432 CFIP05156 583 aa19.24■□□□□ 0.67
COL7A1-209ENST00000474432 CSRP1P21291 193 aaKnown RBP19.24■□□□□ 0.67
COL7A1-209ENST00000474432 MAPK8P45983 427 aa19.24■□□□□ 0.67
COL7A1-209ENST00000474432 NOVA1P51513 510 aaKnown RBP19.24■□□□□ 0.67
COL7A1-209ENST00000474432 TPD52L1Q16890 204 aaPredicted RBP19.24■□□□□ 0.67
COL7A1-209ENST00000474432 PTPN20Q4JDL3 420 aa19.24■□□□□ 0.67
COL7A1-209ENST00000474432 FNDC3BQ53EP0 1204 aaKnown RBP19.24■□□□□ 0.67
COL7A1-209ENST00000474432 SH3PXD2AQ5TCZ1 1133 aa19.24■□□□□ 0.67
COL7A1-209ENST00000474432 RAP1GAP2Q684P5 730 aa19.24■□□□□ 0.67
COL7A1-209ENST00000474432 OLFML1Q6UWY5 402 aa19.24■□□□□ 0.67
COL7A1-209ENST00000474432 CACUL1Q86Y37 369 aa19.24■□□□□ 0.67
COL7A1-209ENST00000474432 MFN1Q8IWA4 741 aa19.24■□□□□ 0.67
COL7A1-209ENST00000474432 C1orf131Q8NDD1 294 aaKnown RBP19.24■□□□□ 0.67
COL7A1-209ENST00000474432 OR2I1PQ8NGU4 316 aa19.24■□□□□ 0.67
COL7A1-209ENST00000474432 DDX50Q9BQ39 737 aaKnown RBP19.24■□□□□ 0.67
COL7A1-209ENST00000474432 TRIM62Q9BVG3 475 aa19.24■□□□□ 0.67
COL7A1-209ENST00000474432 GPR174Q9BXC1 333 aa19.24■□□□□ 0.67
COL7A1-209ENST00000474432 NAA15Q9BXJ9 866 aaKnown RBP19.24■□□□□ 0.67
COL7A1-209ENST00000474432 ASNSD1Q9NWL6 643 aa19.24■□□□□ 0.67
COL7A1-209ENST00000474432 PLA2G4CQ9UP65 541 aa19.24■□□□□ 0.67
COL7A1-209ENST00000474432 CEP295Q9C0D2 2601 aa19.24■□□□□ 0.67
COL7A1-209ENST00000474432 KMT2BQ9UMN6 2715 aaPredicted RBP19.24■□□□□ 0.67
COL7A1-209ENST00000474432 GLI1P08151 1106 aa19.23■□□□□ 0.67
COL7A1-209ENST00000474432 POLR2EP19388 210 aaKnown RBP19.23■□□□□ 0.67
COL7A1-209ENST00000474432 TACR2P21452 398 aa19.23■□□□□ 0.67
COL7A1-209ENST00000474432 RPS14P62263 151 aaKnown RBP19.23■□□□□ 0.67
COL7A1-209ENST00000474432 ARID5AQ03989 594 aa19.23■□□□□ 0.67
COL7A1-209ENST00000474432 PTK2Q05397 1052 aa19.23■□□□□ 0.67
COL7A1-209ENST00000474432 SEMA3BQ13214 749 aa19.23■□□□□ 0.67
COL7A1-209ENST00000474432 UAP1L1Q3KQV9 507 aa19.23■□□□□ 0.67
COL7A1-209ENST00000474432 OTUD1Q5VV17 481 aaPredicted RBP19.23■□□□□ 0.67
COL7A1-209ENST00000474432 FAM183BPQ6ZVS7 135 aa19.23■□□□□ 0.67
COL7A1-209ENST00000474432 PIP4P1Q86T03 277 aa19.23■□□□□ 0.67
COL7A1-209ENST00000474432 FAM114A1Q8IWE2 563 aa19.23■□□□□ 0.67
COL7A1-209ENST00000474432 LGI2Q8N0V4 545 aa19.23■□□□□ 0.67
COL7A1-209ENST00000474432 CADM4Q8NFZ8 388 aa19.23■□□□□ 0.67
COL7A1-209ENST00000474432 C1orf216Q8TAB5 229 aa19.23■□□□□ 0.67
COL7A1-209ENST00000474432 FOXJ1Q92949 421 aa19.23■□□□□ 0.67
COL7A1-209ENST00000474432 BTN2A3PQ96KV6 586 aa19.23■□□□□ 0.67
COL7A1-209ENST00000474432 ADAM33Q9BZ11 813 aa19.23■□□□□ 0.67
COL7A1-209ENST00000474432 PLCB1Q9NQ66 1216 aa19.23■□□□□ 0.67
COL7A1-209ENST00000474432 WASF3Q9UPY6 502 aa19.23■□□□□ 0.67
COL7A1-209ENST00000474432 FHOD1Q9Y613 1164 aa19.23■□□□□ 0.67
COL7A1-209ENST00000474432 METTL12A8MUP2 240 aa19.22■□□□□ 0.67
COL7A1-209ENST00000474432 ARHGAP33O14559 1287 aa19.22■□□□□ 0.67
COL7A1-209ENST00000474432 GRAP2O75791 330 aa19.22■□□□□ 0.67
COL7A1-209ENST00000474432 LUC7L3O95232 432 aaKnown RBP19.22■□□□□ 0.67
COL7A1-209ENST00000474432 ATP5BP06576 529 aaKnown RBP19.22■□□□□ 0.67
COL7A1-209ENST00000474432 PRKCSHP14314 528 aaPredicted RBP19.22■□□□□ 0.67
COL7A1-209ENST00000474432 OXTRP30559 389 aa19.22■□□□□ 0.67
COL7A1-209ENST00000474432 CSKP41240 450 aa19.22■□□□□ 0.67
COL7A1-209ENST00000474432 CTSOP43234 321 aaPredicted RBP19.22■□□□□ 0.67
COL7A1-209ENST00000474432 KCNJ12Q14500 433 aa19.22■□□□□ 0.67
COL7A1-209ENST00000474432 KLHDC7AQ5VTJ3 777 aa19.22■□□□□ 0.67
COL7A1-209ENST00000474432 CARNMT1Q8N4J0 409 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms