RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 LRSAM1Q6UWE0 723 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 CHST9Q7L1S5 443 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 IRF2BP2Q7Z5L9 587 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 AHI1Q8N157 1196 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 BAP1Q92560 729 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 RUBCNQ92622 972 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 ERLEC1Q96DZ1 483 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 TBCBQ99426 244 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 SIK2Q9H0K1 926 aa14.72□□□□□ -0.05
VAMP4-203ENST00000474047 ZFHX2Q9C0A1 2572 aaPredicted RBP14.72□□□□□ -0.05
VAMP4-203ENST00000474047 ANKRD62A6NC57 917 aa14.71□□□□□ -0.05
VAMP4-203ENST00000474047 GFRA2O00451 464 aa14.71□□□□□ -0.05
VAMP4-203ENST00000474047 SYNCRIPO60506 623 aaKnown RBP14.71□□□□□ -0.05
VAMP4-203ENST00000474047 ATP5BP06576 529 aaKnown RBP14.71□□□□□ -0.05
VAMP4-203ENST00000474047 KRT3P12035 628 aa14.71□□□□□ -0.05
VAMP4-203ENST00000474047 HNRNPLP14866 589 aaKnown RBP eCLIP14.71□□□□□ -0.052e-8■■■□□ 14.6
VAMP4-203ENST00000474047 HLA-FP30511 346 aa14.71□□□□□ -0.05
VAMP4-203ENST00000474047 SDC4P31431 198 aa14.71□□□□□ -0.05
VAMP4-203ENST00000474047 CENPCQ03188 943 aa14.71□□□□□ -0.05
VAMP4-203ENST00000474047 KLHL30Q0D2K2 578 aa14.71□□□□□ -0.05
VAMP4-203ENST00000474047 BRMS1LQ5PSV4 323 aa14.71□□□□□ -0.05
VAMP4-203ENST00000474047 PPP1R2P3Q6NXS1 205 aa14.71□□□□□ -0.05
VAMP4-203ENST00000474047 PHF13Q86YI8 300 aaPredicted RBP14.71□□□□□ -0.05
VAMP4-203ENST00000474047 CPLX3Q8WVH0 158 aa14.71□□□□□ -0.05
VAMP4-203ENST00000474047 CFAP57Q96MR6 1250 aa14.71□□□□□ -0.05
VAMP4-203ENST00000474047 PRICKLE1Q96MT3 831 aaPredicted RBP14.71□□□□□ -0.05
VAMP4-203ENST00000474047 RPRD1AQ96P16 312 aaPredicted RBP14.71□□□□□ -0.05
VAMP4-203ENST00000474047 TKTL2Q9H0I9 626 aa14.71□□□□□ -0.05
VAMP4-203ENST00000474047 PIGVQ9NUD9 493 aa14.71□□□□□ -0.05
VAMP4-203ENST00000474047 TMEM59LQ9UK28 342 aa14.71□□□□□ -0.05
VAMP4-203ENST00000474047 INVSQ9Y283 1065 aa14.71□□□□□ -0.05
VAMP4-203ENST00000474047 STON1Q9Y6Q2 735 aa14.71□□□□□ -0.05
VAMP4-203ENST00000474047 CBFA2T2O43439 604 aa14.7□□□□□ -0.06
VAMP4-203ENST00000474047 LUC7L3O95232 432 aaKnown RBP14.7□□□□□ -0.06
VAMP4-203ENST00000474047 MOCS3O95396 460 aa14.7□□□□□ -0.06
VAMP4-203ENST00000474047 PDGFRAP16234 1089 aa14.7□□□□□ -0.06
VAMP4-203ENST00000474047 TFE3P19532 575 aaPredicted RBP14.7□□□□□ -0.06
VAMP4-203ENST00000474047 FLT3P36888 993 aa14.7□□□□□ -0.06
VAMP4-203ENST00000474047 CXCR3P49682 368 aa14.7□□□□□ -0.06
VAMP4-203ENST00000474047 ATP11AP98196 1134 aa14.7□□□□□ -0.06
VAMP4-203ENST00000474047 EIF4EBP2Q13542 120 aaPredicted RBP14.7□□□□□ -0.06
VAMP4-203ENST00000474047 FNDC3BQ53EP0 1204 aaKnown RBP14.7□□□□□ -0.06
VAMP4-203ENST00000474047 TTC39BQ5VTQ0 682 aaPredicted RBP14.7□□□□□ -0.06
VAMP4-203ENST00000474047 LAIR1Q6GTX8 287 aa14.7□□□□□ -0.06
VAMP4-203ENST00000474047 ACAD10Q6JQN1 1059 aa14.7□□□□□ -0.06
VAMP4-203ENST00000474047 SERPINA13PQ6UXR4 307 aa14.7□□□□□ -0.06
VAMP4-203ENST00000474047 ARCQ7LC44 396 aa14.7□□□□□ -0.06
VAMP4-203ENST00000474047 EMC1Q8N766 993 aa14.7□□□□□ -0.06
VAMP4-203ENST00000474047 MDGA1Q8NFP4 955 aa14.7□□□□□ -0.06
VAMP4-203ENST00000474047 FIBINQ8TAL6 211 aa14.7□□□□□ -0.06
VAMP4-203ENST00000474047 SORCS1Q8WY21 1168 aa14.7□□□□□ -0.06
VAMP4-203ENST00000474047 IQCDQ96DY2 449 aa14.7□□□□□ -0.06
VAMP4-203ENST00000474047 HAUS4Q9H6D7 363 aa14.7□□□□□ -0.06
VAMP4-203ENST00000474047 AIPL1Q9NZN9 384 aa14.7□□□□□ -0.06
VAMP4-203ENST00000474047 THAP10Q9P2Z0 257 aaPredicted RBP14.7□□□□□ -0.06
VAMP4-203ENST00000474047 HCN2Q9UL51 889 aa14.7□□□□□ -0.06
VAMP4-203ENST00000474047 RAD54BQ9Y620 910 aa14.7□□□□□ -0.06
VAMP4-203ENST00000474047 TMCO5BA8MYB1 307 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 WASH3PC4AMC7 463 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 MAP3K13O43283 966 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 PAGE1O75459 146 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 DESP17661 470 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 CD70P32970 193 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 RDXP35241 583 aaKnown RBP14.69□□□□□ -0.06
VAMP4-203ENST00000474047 C1QBPQ07021 282 aaKnown RBP14.69□□□□□ -0.06
VAMP4-203ENST00000474047 AUHQ13825 339 aaKnown RBP14.69□□□□□ -0.06
VAMP4-203ENST00000474047 BYSLQ13895 437 aaKnown RBP14.69□□□□□ -0.06
VAMP4-203ENST00000474047 ZNF234Q14588 700 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 CDO1Q16878 200 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 FIGNQ5HY92 759 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 MBLAC2Q68D91 279 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 DNAJC24Q6P3W2 148 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 LRRC31Q6UY01 552 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 RASSF3Q86WH2 238 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 RNF214Q8ND24 703 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 RXFP2Q8WXD0 754 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 NT5C3BQ969T7 300 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 PGAP3Q96FM1 320 aaPredicted RBP14.69□□□□□ -0.06
VAMP4-203ENST00000474047 SPACA7Q96KW9 195 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 GABRG3Q99928 467 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 KIAA1522Q9P206 1035 aaPredicted RBP14.69□□□□□ -0.06
VAMP4-203ENST00000474047 VANGL2Q9ULK5 521 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 PIEZO1Q92508 2521 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 ADCY5O95622 1261 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 CHRM1P11229 460 aaPredicted RBP14.69□□□□□ -0.06
VAMP4-203ENST00000474047 ST8SIA6P61647 398 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 ELF2Q15723 593 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 ARL13BQ3SXY8 428 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 TDRD12Q587J7 1177 aaKnown RBP14.69□□□□□ -0.06
VAMP4-203ENST00000474047 FBXL22Q6P050 247 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 C11orf74Q86VG3 221 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 C3orf20Q8ND61 904 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 WFDC5Q8TCV5 224 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 CYB5D2Q8WUJ1 264 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 MYEOVQ96EZ4 313 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 PPP1R9BQ96SB3 815 aa14.69□□□□□ -0.06
VAMP4-203ENST00000474047 PRMT1Q99873 361 aaKnown RBP14.69□□□□□ -0.06
VAMP4-203ENST00000474047 XPO4Q9C0E2 1151 aaKnown RBP14.69□□□□□ -0.06
VAMP4-203ENST00000474047 LUC7L2Q9Y383 392 aaKnown RBP14.69□□□□□ -0.06
VAMP4-203ENST00000474047 HS3ST4Q9Y661 456 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms