RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 RPS24P62847 133 aaKnown RBP14.22□□□□□ -0.13
USF1-205ENST00000473969 MESP2Q0VG99 397 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 AUHQ13825 339 aaKnown RBP14.22□□□□□ -0.13
USF1-205ENST00000473969 DMC1Q14565 340 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 EIF4HQ15056 248 aaKnown RBP14.22□□□□□ -0.13
USF1-205ENST00000473969 C15orf59Q2T9L4 293 aaPredicted RBP14.22□□□□□ -0.13
USF1-205ENST00000473969 CCDC122Q5T0U0 273 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 ALKBH5Q6P6C2 394 aaKnown RBP14.22□□□□□ -0.13
USF1-205ENST00000473969 SYT13Q7L8C5 426 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 STRADAQ7RTN6 431 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 FAM131BQ86XD5 332 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 GAS2L3Q86XJ1 694 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 CHPFQ8IZ52 775 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 CFAP52Q8N1V2 620 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 PHTF2Q8N3S3 785 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 CCDC33Q8N5R6 958 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 FAM172AQ8WUF8 416 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 ATRIPQ8WXE1 791 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 EZH1Q92800 747 aaPredicted RBP14.22□□□□□ -0.13
USF1-205ENST00000473969 PPP1R9BQ96SB3 815 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 DNAJC7Q99615 494 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 CIPCQ9C0C6 399 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 ABHD10Q9NUJ1 306 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 ABCB8Q9NUT2 735 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 MYO1AQ9UBC5 1043 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 MMP17Q9ULZ9 603 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 STARD13Q9Y3M8 1113 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 HS3ST4Q9Y661 456 aa14.22□□□□□ -0.13
USF1-205ENST00000473969 GFRA2O00451 464 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 NPC1O15118 1278 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 AKR1B10O60218 316 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 ALDH1A2O94788 518 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 ENDOD1O94919 500 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 LUC7L3O95232 432 aaKnown RBP14.21□□□□□ -0.13
USF1-205ENST00000473969 PAPSS2O95340 614 aaPredicted RBP14.21□□□□□ -0.13
USF1-205ENST00000473969 ATP5BP06576 529 aaKnown RBP14.21□□□□□ -0.13
USF1-205ENST00000473969 PLEKP08567 350 aaPredicted RBP14.21□□□□□ -0.13
USF1-205ENST00000473969 PABPC1P11940 636 aaKnown RBP14.21□□□□□ -0.13
USF1-205ENST00000473969 POLR2EP19388 210 aaKnown RBP14.21□□□□□ -0.13
USF1-205ENST00000473969 PSMA2P25787 234 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 NTSR1P30989 418 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 HOXD11P31277 338 aaPredicted RBP14.21□□□□□ -0.13
USF1-205ENST00000473969 EIF4A3P38919 411 aaKnown RBP14.21□□□□□ -0.13
USF1-205ENST00000473969 KIR2DL1P43626 348 aaPredicted RBP14.21□□□□□ -0.13
USF1-205ENST00000473969 SGSHP51688 502 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 ZNF75DP51815 510 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 ZNF143P52747 638 aaPredicted RBP14.21□□□□□ -0.13
USF1-205ENST00000473969 MAMLD1Q13495 774 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 EMC10Q5UCC4 262 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 OTUD1Q5VV17 481 aaPredicted RBP14.21□□□□□ -0.13
USF1-205ENST00000473969 PLEKHA7Q6IQ23 1121 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 TRNP1Q6NT89 227 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 FBXL22Q6P050 247 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 SCYL2Q6P3W7 929 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 PKN3Q6P5Z2 889 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 TSSK4Q6SA08 328 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 CHST9Q7L1S5 443 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 AHI1Q8N157 1196 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 CAMKK1Q8N5S9 505 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 ALLCQ8N6M5 410 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 TXNDC5Q8NBS9 432 aaKnown RBP14.21□□□□□ -0.13
USF1-205ENST00000473969 TSTD1Q8NFU3 115 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 FIBINQ8TAL6 211 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 MRFAP1L1Q96HT8 127 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 C1orf74Q96LT6 269 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 CCDC42Q96M95 316 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 PRICKLE1Q96MT3 831 aaPredicted RBP14.21□□□□□ -0.13
USF1-205ENST00000473969 HAPLN3Q96S86 360 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 CNPY3Q9BT09 278 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 ISCUQ9H1K1 167 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 POLMQ9NP87 494 aaPredicted RBP14.21□□□□□ -0.13
USF1-205ENST00000473969 ZSCAN32Q9NX65 697 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 ELOVL2Q9NXB9 296 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 CALCOCO1Q9P1Z2 691 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 KIAA1522Q9P206 1035 aaPredicted RBP14.21□□□□□ -0.13
USF1-205ENST00000473969 ARHGAP20Q9P2F6 1191 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 GGA2Q9UJY4 613 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 VANGL2Q9ULK5 521 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 PLA2G4CQ9UP65 541 aa14.21□□□□□ -0.13
USF1-205ENST00000473969 ZNF318Q5VUA4 2279 aa14.2□□□□□ -0.14
USF1-205ENST00000473969 A0A087X0T9 212 aa14.2□□□□□ -0.14
USF1-205ENST00000473969 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.2□□□□□ -0.14
USF1-205ENST00000473969 SSU72P8A0A1W2PR75 194 aa14.2□□□□□ -0.14
USF1-205ENST00000473969 PRRT4C9JH25 899 aa14.2□□□□□ -0.14
USF1-205ENST00000473969 AP5Z1O43299 807 aa14.2□□□□□ -0.14
USF1-205ENST00000473969 ATMINO43313 823 aaPredicted RBP14.2□□□□□ -0.14
USF1-205ENST00000473969 SRGAP2O75044 1071 aa14.2□□□□□ -0.14
USF1-205ENST00000473969 RNF8O76064 485 aa14.2□□□□□ -0.14
USF1-205ENST00000473969 FAM228BP0C875 321 aa14.2□□□□□ -0.14
USF1-205ENST00000473969 DGKEP52429 567 aa14.2□□□□□ -0.14
USF1-205ENST00000473969 ATXN1P54253 815 aaKnown RBP14.2□□□□□ -0.14
USF1-205ENST00000473969 RPL7AP62424 266 aaKnown RBP14.2□□□□□ -0.14
USF1-205ENST00000473969 NHLH1Q02575 133 aa14.2□□□□□ -0.14
USF1-205ENST00000473969 ZNF177Q13360 481 aaPredicted RBP14.2□□□□□ -0.14
USF1-205ENST00000473969 GEN1Q17RS7 908 aa14.2□□□□□ -0.14
USF1-205ENST00000473969 SFTPA1Q8IWL2 248 aa14.2□□□□□ -0.14
USF1-205ENST00000473969 MAML2Q8IZL2 1156 aaPredicted RBP14.2□□□□□ -0.14
USF1-205ENST00000473969 IL17RCQ8NAC3 791 aa14.2□□□□□ -0.14
USF1-205ENST00000473969 CENPIQ92674 756 aaPredicted RBP14.2□□□□□ -0.14
USF1-205ENST00000473969 PRMT1Q99873 361 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms