RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 CAVIN2O95810 425 aa23.36■■□□□ 1.33
PTP4A1-203ENST00000473334 SLC2A3P11169 496 aa23.36■■□□□ 1.33
PTP4A1-203ENST00000473334 ZNF18P17022 549 aa23.36■■□□□ 1.33
PTP4A1-203ENST00000473334 CDK11BP21127 795 aaKnown RBP23.36■■□□□ 1.33
PTP4A1-203ENST00000473334 CD70P32970 193 aa23.36■■□□□ 1.33
PTP4A1-203ENST00000473334 RPS24P62847 133 aaKnown RBP23.36■■□□□ 1.33
PTP4A1-203ENST00000473334 SPDYCQ5MJ68 293 aa23.36■■□□□ 1.33
PTP4A1-203ENST00000473334 SERPINA13PQ6UXR4 307 aa23.36■■□□□ 1.33
PTP4A1-203ENST00000473334 SLC36A4Q6YBV0 504 aa23.36■■□□□ 1.33
PTP4A1-203ENST00000473334 DGLUCYQ7Z3D6 616 aa23.36■■□□□ 1.33
PTP4A1-203ENST00000473334 ADIPOR2Q86V24 386 aa23.36■■□□□ 1.33
PTP4A1-203ENST00000473334 CHSY1Q86X52 802 aa23.36■■□□□ 1.33
PTP4A1-203ENST00000473334 AOPEPQ8N6M6 819 aa23.36■■□□□ 1.33
PTP4A1-203ENST00000473334 FIBINQ8TAL6 211 aa23.36■■□□□ 1.33
PTP4A1-203ENST00000473334 SLC6A17Q9H1V8 727 aa23.36■■□□□ 1.33
PTP4A1-203ENST00000473334 SMOC1Q9H4F8 434 aa23.36■■□□□ 1.33
PTP4A1-203ENST00000473334 SYNJ2BP-COX16A0A087WUM0 186 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 IGHV1OR15-9A0A0B4J2B8 117 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 KCNU1A8MYU2 1149 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 EPHB6O15197 1021 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 GDF9O60383 454 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 GFPT2O94808 682 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 MMEP08473 750 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 TACR2P21452 398 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 PRKCHP24723 683 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 CCR1P32246 355 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 NOS2P35228 1153 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 GABRB2P47870 512 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 JAM2P57087 298 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 SYCP1Q15431 976 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 RAP1GAP2Q684P5 730 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 MBLAC2Q68D91 279 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 KIAA1324Q6UXG2 1013 aaKnown RBP23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 ERICH1Q86X53 443 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 ZNF677Q86XU0 584 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 CCDC117Q8IWD4 279 aaPredicted RBP23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 TMEFF1Q8IYR6 380 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 LGI2Q8N0V4 545 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 CARNMT1Q8N4J0 409 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 CYB5D2Q8WUJ1 264 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 C18orf8Q96DM3 657 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 RTKNQ9BST9 563 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 NAT10Q9H0A0 1025 aaKnown RBP23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 NLRC4Q9NPP4 1024 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 COX16Q9P0S2 106 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 PLA2G4CQ9UP65 541 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 DNAH14Q0VDD8 3507 aa23.35■■□□□ 1.33
PTP4A1-203ENST00000473334 LRRC10BA6NIK2 292 aa23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 AP5Z1O43299 807 aa23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 ATP5BP06576 529 aaKnown RBP23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 EPHX1P07099 455 aa23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 POLR2EP19388 210 aaKnown RBP23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 ABCB4P21439 1286 aa23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 SOX5P35711 763 aa23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 SCNN1AP37088 669 aa23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 ATXN1P54253 815 aaKnown RBP23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 CDH18Q13634 790 aa23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 ANO6Q4KMQ2 910 aa23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 FNDC3BQ53EP0 1204 aaKnown RBP23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 CFAP52Q8N1V2 620 aa23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 MSANTD4Q8NCY6 345 aa23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 RNF34Q969K3 372 aa23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 LMLNQ96KR4 655 aa23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 PCMTD1Q96MG8 357 aaPredicted RBP23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 SPAG5Q96R06 1193 aa23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 HSD3B7Q9H2F3 369 aa23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 PRDM16Q9HAZ2 1276 aa23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 RRN3Q9NYV6 651 aa23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 CYP8B1Q9UNU6 501 aa23.34■■□□□ 1.33
PTP4A1-203ENST00000473334 F5H5T6 163 aa23.33■■□□□ 1.33
PTP4A1-203ENST00000473334 SLC30A4O14863 429 aa23.33■■□□□ 1.33
PTP4A1-203ENST00000473334 LUC7L3O95232 432 aaKnown RBP23.33■■□□□ 1.33
PTP4A1-203ENST00000473334 DLDP09622 509 aaKnown RBP23.33■■□□□ 1.33
PTP4A1-203ENST00000473334 MATKP42679 507 aa23.33■■□□□ 1.33
PTP4A1-203ENST00000473334 NOMO3P69849 1222 aa23.33■■□□□ 1.33
PTP4A1-203ENST00000473334 RPL6Q02878 288 aaKnown RBP23.33■■□□□ 1.33
PTP4A1-203ENST00000473334 UBXN1Q04323 297 aa23.33■■□□□ 1.33
PTP4A1-203ENST00000473334 LMAN2Q12907 356 aa23.33■■□□□ 1.33
PTP4A1-203ENST00000473334 MTA1Q13330 715 aa23.33■■□□□ 1.33
PTP4A1-203ENST00000473334 CAVIN1Q6NZI2 390 aaKnown RBP23.33■■□□□ 1.33
PTP4A1-203ENST00000473334 ARMCX6Q7L4S7 300 aa23.33■■□□□ 1.33
PTP4A1-203ENST00000473334 METTL3Q86U44 580 aaKnown RBP23.33■■□□□ 1.33
PTP4A1-203ENST00000473334 XYLT1Q86Y38 959 aa23.33■■□□□ 1.33
PTP4A1-203ENST00000473334 NEK11Q8NG66 645 aa23.33■■□□□ 1.33
PTP4A1-203ENST00000473334 MKRN2Q9H000 416 aaKnown RBP23.33■■□□□ 1.33
PTP4A1-203ENST00000473334 TMEM245Q9H330 911 aa23.33■■□□□ 1.33
PTP4A1-203ENST00000473334 NOCTQ9UK39 431 aaKnown RBP23.33■■□□□ 1.33
PTP4A1-203ENST00000473334 LAMA1P25391 3075 aa23.33■■□□□ 1.32
PTP4A1-203ENST00000473334 M0QYT0 321 aa23.32■■□□□ 1.32
PTP4A1-203ENST00000473334 STAT1P42224 750 aa23.32■■□□□ 1.32
PTP4A1-203ENST00000473334 PTGER3P43115 390 aa23.32■■□□□ 1.32
PTP4A1-203ENST00000473334 LIMK1P53667 647 aa23.32■■□□□ 1.32
PTP4A1-203ENST00000473334 FOXK2Q01167 660 aa23.32■■□□□ 1.32
PTP4A1-203ENST00000473334 CDR2Q01850 454 aa23.32■■□□□ 1.32
PTP4A1-203ENST00000473334 NME3Q13232 169 aa23.32■■□□□ 1.32
PTP4A1-203ENST00000473334 PTPRNQ16849 979 aa23.32■■□□□ 1.32
PTP4A1-203ENST00000473334 FAM102AQ5T9C2 384 aaPredicted RBP23.32■■□□□ 1.32
PTP4A1-203ENST00000473334 NAA35Q5VZE5 725 aa23.32■■□□□ 1.32
PTP4A1-203ENST00000473334 LYSMD4Q5XG99 296 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms