RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 KIAA1211LQ6NV74 962 aa15.34■□□□□ 0.05
SSR4-208ENST00000471880 MMS22LQ6ZRQ5 1243 aa15.34■□□□□ 0.05
SSR4-208ENST00000471880 SLC26A9Q7LBE3 791 aa15.34■□□□□ 0.05
SSR4-208ENST00000471880 RASSF3Q86WH2 238 aa15.34■□□□□ 0.05
SSR4-208ENST00000471880 AHI1Q8N157 1196 aa15.34■□□□□ 0.05
SSR4-208ENST00000471880 GPR161Q8N6U8 529 aaKnown RBP15.34■□□□□ 0.05
SSR4-208ENST00000471880 SLC30A5Q8TAD4 765 aa15.34■□□□□ 0.05
SSR4-208ENST00000471880 WFIKKN2Q8TEU8 576 aa15.34■□□□□ 0.05
SSR4-208ENST00000471880 DDX1Q92499 740 aaKnown RBP15.34■□□□□ 0.05
SSR4-208ENST00000471880 AZIN2Q96A70 460 aa15.34■□□□□ 0.05
SSR4-208ENST00000471880 SLC39A13Q96H72 371 aa15.34■□□□□ 0.05
SSR4-208ENST00000471880 PRICKLE1Q96MT3 831 aaPredicted RBP15.34■□□□□ 0.05
SSR4-208ENST00000471880 SIK2Q9H0K1 926 aa15.34■□□□□ 0.05
SSR4-208ENST00000471880 SLC6A17Q9H1V8 727 aa15.34■□□□□ 0.05
SSR4-208ENST00000471880 HSD3B7Q9H2F3 369 aa15.34■□□□□ 0.05
SSR4-208ENST00000471880 CALCOCO1Q9P1Z2 691 aa15.34■□□□□ 0.05
SSR4-208ENST00000471880 PLA2G4CQ9UP65 541 aa15.34■□□□□ 0.05
SSR4-208ENST00000471880 DAAM1Q9Y4D1 1078 aa15.34■□□□□ 0.05
SSR4-208ENST00000471880 CKAP5Q14008 2032 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 KCNU1A8MYU2 1149 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 BCKDHBP21953 392 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 CD70P32970 193 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 GGCXP38435 758 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 MATKP42679 507 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 NSFP46459 744 aaKnown RBP15.33■□□□□ 0.04
SSR4-208ENST00000471880 JAM2P57087 298 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 NOMO3P69849 1222 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 DEUP1Q05D60 604 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 BYSLQ13895 437 aaKnown RBP15.33■□□□□ 0.04
SSR4-208ENST00000471880 RABGAP1LQ5R372 815 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 MBLAC2Q68D91 279 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 C11orf74Q86VG3 221 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 CIR1Q86X95 450 aaPredicted RBP15.33■□□□□ 0.04
SSR4-208ENST00000471880 XYLT1Q86Y38 959 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 DEFB119Q8N690 84 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 FRMD1Q8N878 549 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 ZNF366Q8N895 744 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 ZNF557Q8N988 423 aaPredicted RBP15.33■□□□□ 0.04
SSR4-208ENST00000471880 C12orf50Q8NA57 414 aaPredicted RBP15.33■□□□□ 0.04
SSR4-208ENST00000471880 WFDC5Q8TCV5 224 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 MYEOVQ96EZ4 313 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 RPRD1AQ96P16 312 aaPredicted RBP15.33■□□□□ 0.04
SSR4-208ENST00000471880 ERGIC2Q96RQ1 377 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 C11orf70Q9BRQ4 267 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 DUSP15Q9H1R2 295 aaPredicted RBP15.33■□□□□ 0.04
SSR4-208ENST00000471880 METTL5Q9NRN9 209 aaKnown RBP15.33■□□□□ 0.04
SSR4-208ENST00000471880 SEMA4GQ9NTN9 838 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 NOCTQ9UK39 431 aaKnown RBP15.33■□□□□ 0.04
SSR4-208ENST00000471880 CYP8B1Q9UNU6 501 aa15.33■□□□□ 0.04
SSR4-208ENST00000471880 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.33■□□□□ 0.04
SSR4-208ENST00000471880 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 A0A1W2PQF6 199 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 GFRA2O00451 464 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 TIMM44O43615 452 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 MOCS3O95396 460 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 IGLV3-25P01717 112 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 ATP5BP06576 529 aaKnown RBP15.32■□□□□ 0.04
SSR4-208ENST00000471880 HLA-EP13747 358 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 NDUFV2P19404 249 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 CDH5P33151 784 aaPredicted RBP15.32■□□□□ 0.04
SSR4-208ENST00000471880 ST8SIA6P61647 398 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 FMO1Q01740 532 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 AASDHQ4L235 1098 aaPredicted RBP15.32■□□□□ 0.04
SSR4-208ENST00000471880 TMEM215Q68D42 235 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 TRIM72Q6ZMU5 477 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 LPCAT2Q7L5N7 544 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 APTXQ7Z2E3 356 aaKnown RBP15.32■□□□□ 0.04
SSR4-208ENST00000471880 LUZP1Q86V48 1076 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 TMEFF1Q8IYR6 380 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 TBCBQ99426 244 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 GABRG3Q99928 467 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 SMOC1Q9H4F8 434 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 CBX8Q9HC52 389 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 THAP10Q9P2Z0 257 aaPredicted RBP15.32■□□□□ 0.04
SSR4-208ENST00000471880 VANGL2Q9ULK5 521 aa15.32■□□□□ 0.04
SSR4-208ENST00000471880 MUC22E2RYF6 1773 aaPredicted RBP15.31■□□□□ 0.04
SSR4-208ENST00000471880 CNOT1A5YKK6 2376 aaKnown RBP15.31■□□□□ 0.04
SSR4-208ENST00000471880 LRRC10BA6NIK2 292 aa15.31■□□□□ 0.04
SSR4-208ENST00000471880 NPC1O15118 1278 aa15.31■□□□□ 0.04
SSR4-208ENST00000471880 EPN2O95208 641 aa15.31■□□□□ 0.04
SSR4-208ENST00000471880 LUC7L3O95232 432 aaKnown RBP15.31■□□□□ 0.04
SSR4-208ENST00000471880 CCDC172P0C7W6 258 aa15.31■□□□□ 0.04
SSR4-208ENST00000471880 ACADMP11310 421 aa15.31■□□□□ 0.04
SSR4-208ENST00000471880 FERP16591 822 aa15.31■□□□□ 0.04
SSR4-208ENST00000471880 CHRNB2P17787 502 aa15.31■□□□□ 0.04
SSR4-208ENST00000471880 TFE3P19532 575 aaPredicted RBP15.31■□□□□ 0.04
SSR4-208ENST00000471880 PRKCHP24723 683 aa15.31■□□□□ 0.04
SSR4-208ENST00000471880 MPLP40238 635 aa15.31■□□□□ 0.04
SSR4-208ENST00000471880 P2RY2P41231 377 aa15.31■□□□□ 0.04
SSR4-208ENST00000471880 ID4P47928 161 aa15.31■□□□□ 0.04
SSR4-208ENST00000471880 ATP11AP98196 1134 aa15.31■□□□□ 0.04
SSR4-208ENST00000471880 RPL6Q02878 288 aaKnown RBP15.31■□□□□ 0.04
SSR4-208ENST00000471880 CENPCQ03188 943 aa15.31■□□□□ 0.04
SSR4-208ENST00000471880 LMNB2Q03252 620 aa15.31■□□□□ 0.04
SSR4-208ENST00000471880 LMAN2Q12907 356 aa15.31■□□□□ 0.04
SSR4-208ENST00000471880 SF3A2Q15428 464 aaKnown RBP15.31■□□□□ 0.04
SSR4-208ENST00000471880 CDO1Q16878 200 aa15.31■□□□□ 0.04
SSR4-208ENST00000471880 FUT11Q495W5 492 aa15.31■□□□□ 0.04
SSR4-208ENST00000471880 MPP7Q5T2T1 576 aa15.31■□□□□ 0.04
SSR4-208ENST00000471880 RNF219Q5W0B1 726 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms