RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 SLC11A2P49281 568 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 ZBED6P86452 979 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 ARTNQ5T4W7 220 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 EMC10Q5UCC4 262 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 ACAD10Q6JQN1 1059 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 EMC1Q8N766 993 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 MSANTD4Q8NCY6 345 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 RPLP0P6Q8NHW5 317 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 JOSD2Q8TAC2 188 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 SYN2Q92777 582 aaPredicted RBP12.85□□□□□ -0.35
LINC00888-202ENST00000471496 TBCBQ99426 244 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 PRMT1Q99873 361 aaKnown RBP12.85□□□□□ -0.35
LINC00888-202ENST00000471496 NUCKS1Q9H1E3 243 aaKnown RBP12.85□□□□□ -0.35
LINC00888-202ENST00000471496 RBSNQ9H1K0 784 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 FAM204AQ9H8W3 233 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 METTL5Q9NRN9 209 aaKnown RBP12.85□□□□□ -0.35
LINC00888-202ENST00000471496 PIGVQ9NUD9 493 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.85□□□□□ -0.35
LINC00888-202ENST00000471496 ADAM22Q9P0K1 906 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 SLC27A6Q9Y2P4 619 aa12.85□□□□□ -0.35
LINC00888-202ENST00000471496 MUC22E2RYF6 1773 aaPredicted RBP12.84□□□□□ -0.35
LINC00888-202ENST00000471496 M0QYT0 321 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 ZBTB24O43167 697 aaPredicted RBP12.84□□□□□ -0.35
LINC00888-202ENST00000471496 GDF9O60383 454 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 TNFAIP3P21580 790 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 TNFRSF4P43489 277 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 CXCL12P48061 93 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 CXCR3P49682 368 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 CCR3P51677 355 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 ATXN1P54253 815 aaKnown RBP12.84□□□□□ -0.35
LINC00888-202ENST00000471496 SEC13P55735 322 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 KLHL30Q0D2K2 578 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 PPP2R5DQ14738 602 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 ZNF528Q3MIS6 628 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 SLC25A52Q3SY17 297 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 MPPE1Q53F39 396 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 RAB6CQ53S08 254 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 GRAMD4Q6IC98 578 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 SARM1Q6SZW1 724 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 DNAAF5Q86Y56 855 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 DDI1Q8WTU0 396 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 CPLX3Q8WVH0 158 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 IQCDQ96DY2 449 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 BTN2A3PQ96KV6 586 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 CFAP57Q96MR6 1250 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 XPO6Q96QU8 1125 aaKnown RBP12.84□□□□□ -0.35
LINC00888-202ENST00000471496 RAB6CQ9H0N0 254 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 SEPT11Q9NVA2 429 aaKnown RBP12.84□□□□□ -0.35
LINC00888-202ENST00000471496 FAM86C1Q9NVL1 165 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 RRN3Q9NYV6 651 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 STARD13Q9Y3M8 1113 aa12.84□□□□□ -0.35
LINC00888-202ENST00000471496 USP34Q70CQ2 3546 aa12.83□□□□□ -0.35
LINC00888-202ENST00000471496 SYNJ2BP-COX16A0A087WUM0 186 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 C2CD4BA6NLJ0 364 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 CBFA2T2O43439 604 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 ENDOD1O94919 500 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 MOCS2O96007 188 aaPredicted RBP12.83□□□□□ -0.36
LINC00888-202ENST00000471496 APOEP02649 317 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 PLEKP08567 350 aaPredicted RBP12.83□□□□□ -0.36
LINC00888-202ENST00000471496 HNRNPH3P31942 346 aaKnown RBP12.83□□□□□ -0.36
LINC00888-202ENST00000471496 CASP14P31944 242 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 CCR1P32246 355 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 DGKGP49619 791 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 RPS24P62847 133 aaKnown RBP12.83□□□□□ -0.36
LINC00888-202ENST00000471496 CSTF1Q05048 431 aaKnown RBP12.83□□□□□ -0.36
LINC00888-202ENST00000471496 DMWDQ09019 674 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 NME3Q13232 169 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 GEN1Q17RS7 908 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 C2orf27AQ580R0 203 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 MS4A13Q5J8X5 152 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 MPP7Q5T2T1 576 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 SPECC1LQ69YQ0 1117 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 VSTM4Q8IW00 320 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 MCOLN2Q8IZK6 566 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 IL17RCQ8NAC3 791 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 C3orf20Q8ND61 904 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 WFDC5Q8TCV5 224 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 TMA16Q96EY4 203 aaKnown RBP12.83□□□□□ -0.36
LINC00888-202ENST00000471496 LMLNQ96KR4 655 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 ZDHHC4Q9NPG8 344 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 PRDM9Q9NQV7 894 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 COX16Q9P0S2 106 aa12.83□□□□□ -0.36
LINC00888-202ENST00000471496 TBC1D3BA6NDS4 549 aa12.82□□□□□ -0.36
LINC00888-202ENST00000471496 ADCY5O95622 1261 aa12.82□□□□□ -0.36
LINC00888-202ENST00000471496 CYBBP04839 570 aa12.82□□□□□ -0.36
LINC00888-202ENST00000471496 CALB1P05937 261 aa12.82□□□□□ -0.36
LINC00888-202ENST00000471496 SLC2A3P11169 496 aa12.82□□□□□ -0.36
LINC00888-202ENST00000471496 GZMAP12544 262 aa12.82□□□□□ -0.36
LINC00888-202ENST00000471496 HNRNPLP14866 589 aaKnown RBP eCLIP12.82□□□□□ -0.36
LINC00888-202ENST00000471496 RRM1P23921 792 aa12.82□□□□□ -0.36
LINC00888-202ENST00000471496 HLA-FP30511 346 aa12.82□□□□□ -0.36
LINC00888-202ENST00000471496 HOXA6P31267 233 aa12.82□□□□□ -0.36
LINC00888-202ENST00000471496 GBP1P32455 592 aa12.82□□□□□ -0.36
LINC00888-202ENST00000471496 RFC1P35251 1148 aaPredicted RBP12.82□□□□□ -0.36
LINC00888-202ENST00000471496 NBL1P41271 181 aa12.82□□□□□ -0.36
LINC00888-202ENST00000471496 SULT1E1P49888 294 aa12.82□□□□□ -0.36
LINC00888-202ENST00000471496 MRPS21P82921 87 aaKnown RBP12.82□□□□□ -0.36
LINC00888-202ENST00000471496 ARID5BQ14865 1188 aa12.82□□□□□ -0.36
LINC00888-202ENST00000471496 CCDC14Q49A88 953 aa12.82□□□□□ -0.36
LINC00888-202ENST00000471496 C10orf76Q5T2E6 689 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms