RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 NTAN1Q96AB6 310 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 RIPOR3Q96MK2 946 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 UHRF1Q96T88 793 aaPredicted RBP18.09■□□□□ 0.49
HSPG2-208ENST00000471322 SEPT5Q99719 369 aaPredicted RBP18.09■□□□□ 0.49
HSPG2-208ENST00000471322 RHOBTB2Q9BYZ6 727 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 ADAM33Q9BZ11 813 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 PABPC3Q9H361 631 aaKnown RBP18.09■□□□□ 0.49
HSPG2-208ENST00000471322 ATP8A1Q9Y2Q0 1164 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 PCDHB5Q9Y5E4 795 aa18.09■□□□□ 0.49
HSPG2-208ENST00000471322 C2orf16Q68DN1 1984 aa18.08■□□□□ 0.49
HSPG2-208ENST00000471322 CFAP69A5D8W1 941 aa18.08■□□□□ 0.48
HSPG2-208ENST00000471322 C1RP00736 705 aa18.08■□□□□ 0.48
HSPG2-208ENST00000471322 LRG1P02750 347 aa18.08■□□□□ 0.48
HSPG2-208ENST00000471322 RBP3P10745 1247 aa18.08■□□□□ 0.48
HSPG2-208ENST00000471322 CYP2F1P24903 491 aa18.08■□□□□ 0.48
HSPG2-208ENST00000471322 ZNF135P52742 658 aaPredicted RBP18.08■□□□□ 0.48
HSPG2-208ENST00000471322 CA9Q16790 459 aa18.08■□□□□ 0.48
HSPG2-208ENST00000471322 ARL13BQ3SXY8 428 aa18.08■□□□□ 0.48
HSPG2-208ENST00000471322 EFHC2Q5JST6 749 aa18.08■□□□□ 0.48
HSPG2-208ENST00000471322 IZUMO3Q5VZ72 239 aa18.08■□□□□ 0.48
HSPG2-208ENST00000471322 HFE2Q6ZVN8 426 aa18.08■□□□□ 0.48
HSPG2-208ENST00000471322 BZW1Q7L1Q6 419 aaKnown RBP18.08■□□□□ 0.48
HSPG2-208ENST00000471322 FAM131BQ86XD5 332 aa18.08■□□□□ 0.48
HSPG2-208ENST00000471322 TCEAL8Q8IYN2 117 aa18.08■□□□□ 0.48
HSPG2-208ENST00000471322 CCDC185Q8N715 623 aa18.08■□□□□ 0.48
HSPG2-208ENST00000471322 PQLC3Q8N755 202 aa18.08■□□□□ 0.48
HSPG2-208ENST00000471322 PCDH19Q8TAB3 1148 aa18.08■□□□□ 0.48
HSPG2-208ENST00000471322 C8orf48Q96LL4 319 aa18.08■□□□□ 0.48
HSPG2-208ENST00000471322 TMEM121Q9BTD3 319 aa18.08■□□□□ 0.48
HSPG2-208ENST00000471322 SAE1Q9UBE0 346 aaPredicted RBP18.08■□□□□ 0.48
HSPG2-208ENST00000471322 PLAAQ9Y263 795 aa18.08■□□□□ 0.48
HSPG2-208ENST00000471322 GOLGA6L10A6NI86 522 aa18.07■□□□□ 0.48
HSPG2-208ENST00000471322 H3BRJ5 948 aa18.07■□□□□ 0.48
HSPG2-208ENST00000471322 ATXN1P54253 815 aaKnown RBP18.07■□□□□ 0.48
HSPG2-208ENST00000471322 SCAPQ12770 1279 aa18.07■□□□□ 0.48
HSPG2-208ENST00000471322 NME3Q13232 169 aa18.07■□□□□ 0.48
HSPG2-208ENST00000471322 UAP1Q16222 522 aaPredicted RBP18.07■□□□□ 0.48
HSPG2-208ENST00000471322 P3H1Q32P28 736 aa18.07■□□□□ 0.48
HSPG2-208ENST00000471322 MGAT5BQ3V5L5 792 aa18.07■□□□□ 0.48
HSPG2-208ENST00000471322 OTUD1Q5VV17 481 aaPredicted RBP18.07■□□□□ 0.48
HSPG2-208ENST00000471322 BSPRYQ5W0U4 402 aa18.07■□□□□ 0.48
HSPG2-208ENST00000471322 TRMT10CQ7L0Y3 403 aaKnown RBP18.07■□□□□ 0.48
HSPG2-208ENST00000471322 BHLHA9Q7RTU4 235 aa18.07■□□□□ 0.48
HSPG2-208ENST00000471322 STKLD1Q8NE28 680 aa18.07■□□□□ 0.48
HSPG2-208ENST00000471322 GPR152Q8TDT2 470 aa18.07■□□□□ 0.48
HSPG2-208ENST00000471322 KCTD15Q96SI1 283 aaPredicted RBP18.07■□□□□ 0.48
HSPG2-208ENST00000471322 CD320Q9NPF0 282 aa18.07■□□□□ 0.48
HSPG2-208ENST00000471322 TPX2Q9ULW0 747 aaKnown RBP18.07■□□□□ 0.48
HSPG2-208ENST00000471322 YIPF1Q9Y548 306 aa18.07■□□□□ 0.48
HSPG2-208ENST00000471322 SMAPO00193 183 aa18.06■□□□□ 0.48
HSPG2-208ENST00000471322 DNALI1O14645 258 aaPredicted RBP18.06■□□□□ 0.48
HSPG2-208ENST00000471322 TNFRSF10BO14763 440 aa18.06■□□□□ 0.48
HSPG2-208ENST00000471322 IFNB1P01574 187 aa18.06■□□□□ 0.48
HSPG2-208ENST00000471322 PECAM1P16284 738 aaPredicted RBP18.06■□□□□ 0.48
HSPG2-208ENST00000471322 ADRA1BP35368 520 aa18.06■□□□□ 0.48
HSPG2-208ENST00000471322 MTHFRP42898 656 aa18.06■□□□□ 0.48
HSPG2-208ENST00000471322 VPS41P49754 854 aa18.06■□□□□ 0.48
HSPG2-208ENST00000471322 ZP2Q05996 745 aa18.06■□□□□ 0.48
HSPG2-208ENST00000471322 GPS1Q13098 491 aa18.06■□□□□ 0.48
HSPG2-208ENST00000471322 XRCC4Q13426 336 aa18.06■□□□□ 0.48
HSPG2-208ENST00000471322 MORF4L2Q15014 288 aa18.06■□□□□ 0.48
HSPG2-208ENST00000471322 KCTD19Q17RG1 926 aaPredicted RBP18.06■□□□□ 0.48
HSPG2-208ENST00000471322 HIBCHQ6NVY1 386 aaPredicted RBP18.06■□□□□ 0.48
HSPG2-208ENST00000471322 DARS2Q6PI48 645 aaKnown RBP18.06■□□□□ 0.48
HSPG2-208ENST00000471322 ST13P5Q8NFI4 369 aaPredicted RBP18.06■□□□□ 0.48
HSPG2-208ENST00000471322 CSPG4P5Q96PW8 444 aa18.06■□□□□ 0.48
HSPG2-208ENST00000471322 PHF7Q9BWX1 381 aaPredicted RBP18.06■□□□□ 0.48
HSPG2-208ENST00000471322 COL25A1Q9BXS0 654 aaPredicted RBP18.06■□□□□ 0.48
HSPG2-208ENST00000471322 FBXO44Q9H4M3 255 aa18.06■□□□□ 0.48
HSPG2-208ENST00000471322 FAM204AQ9H8W3 233 aa18.06■□□□□ 0.48
HSPG2-208ENST00000471322 ABCC13Q9NSE7 274 aa18.06■□□□□ 0.48
HSPG2-208ENST00000471322 CALCOCO1Q9P1Z2 691 aa18.06■□□□□ 0.48
HSPG2-208ENST00000471322 DNMT3BQ9UBC3 853 aaKnown RBP18.06■□□□□ 0.48
HSPG2-208ENST00000471322 H7C0C1 242 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 POLR3GO15318 223 aaPredicted RBP18.05■□□□□ 0.48
HSPG2-208ENST00000471322 TP73O15350 636 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 RNF40O75150 1001 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 XYLBO75191 536 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 ZNF189O75820 626 aaPredicted RBP18.05■□□□□ 0.48
HSPG2-208ENST00000471322 HNRNPA1P09651 372 aaKnown RBP eCLIP18.05■□□□□ 0.48
HSPG2-208ENST00000471322 ATP5OP48047 213 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 GPR15P49685 360 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 SLC5A3P53794 718 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 SDHAF4Q5VUM1 108 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 DENND2CQ68D51 928 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 C1orf228Q6PIY5 440 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 CROCCP2Q86T23 111 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 SCN4BQ8IWT1 228 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 ADHFE1Q8IWW8 467 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 ARHGAP18Q8N392 663 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 C2orf15Q8WU43 125 aaKnown RBP18.05■□□□□ 0.48
HSPG2-208ENST00000471322 CORO1BQ9BR76 489 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 PIGVQ9NUD9 493 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 DDIT4Q9NX09 232 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 CWC15Q9P013 229 aaKnown RBP18.05■□□□□ 0.48
HSPG2-208ENST00000471322 NUDT17P0C025 328 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 ACTN2P35609 894 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 CXCR3P49682 368 aa18.05■□□□□ 0.48
HSPG2-208ENST00000471322 YWHAGP61981 247 aaKnown RBP eCLIP18.05■□□□□ 0.48
HSPG2-208ENST00000471322 GABPB1Q06547 395 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms