RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 TMEM51Q9NW97 253 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 C2orf42Q9NWW7 574 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 SLC27A6Q9Y2P4 619 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 PAXBP1Q9Y5B6 917 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 HS3ST4Q9Y661 456 aa20.45■□□□□ 0.86
HDAC7-220ENST00000471235 WDFY4Q6ZS81 3184 aa20.44■□□□□ 0.86
HDAC7-220ENST00000471235 ANKRD62A6NC57 917 aa20.44■□□□□ 0.86
HDAC7-220ENST00000471235 MYBL1P10243 752 aa20.44■□□□□ 0.86
HDAC7-220ENST00000471235 TNFRSF4P43489 277 aa20.44■□□□□ 0.86
HDAC7-220ENST00000471235 ZNF143P52747 638 aaPredicted RBP20.44■□□□□ 0.86
HDAC7-220ENST00000471235 HDAC4P56524 1084 aa20.44■□□□□ 0.86
HDAC7-220ENST00000471235 GFPT1Q06210 699 aaPredicted RBP20.44■□□□□ 0.86
HDAC7-220ENST00000471235 TCF15Q12870 199 aa20.44■□□□□ 0.86
HDAC7-220ENST00000471235 MTA1Q13330 715 aa20.44■□□□□ 0.86
HDAC7-220ENST00000471235 ANGPT1Q15389 498 aa20.44■□□□□ 0.86
HDAC7-220ENST00000471235 TSR1Q2NL82 804 aaKnown RBP20.44■□□□□ 0.86
HDAC7-220ENST00000471235 ASTE1Q2TB18 679 aaPredicted RBP20.44■□□□□ 0.86
HDAC7-220ENST00000471235 MPP7Q5T2T1 576 aa20.44■□□□□ 0.86
HDAC7-220ENST00000471235 ALKBH5Q6P6C2 394 aaKnown RBP20.44■□□□□ 0.86
HDAC7-220ENST00000471235 MAML2Q8IZL2 1156 aaPredicted RBP20.44■□□□□ 0.86
HDAC7-220ENST00000471235 WFDC5Q8TCV5 224 aa20.44■□□□□ 0.86
HDAC7-220ENST00000471235 USP33Q8TEY7 942 aa20.44■□□□□ 0.86
HDAC7-220ENST00000471235 CENPIQ92674 756 aaPredicted RBP20.44■□□□□ 0.86
HDAC7-220ENST00000471235 CHP1Q99653 195 aa20.44■□□□□ 0.86
HDAC7-220ENST00000471235 SLC2A11Q9BYW1 496 aa20.44■□□□□ 0.86
HDAC7-220ENST00000471235 STIM2Q9P246 746 aa20.44■□□□□ 0.86
HDAC7-220ENST00000471235 MYO1AQ9UBC5 1043 aa20.44■□□□□ 0.86
HDAC7-220ENST00000471235 SCINQ9Y6U3 715 aa20.44■□□□□ 0.86
HDAC7-220ENST00000471235 TYW5A2RUC4 315 aaKnown RBP20.43■□□□□ 0.86
HDAC7-220ENST00000471235 TBC1D3BA6NDS4 549 aa20.43■□□□□ 0.86
HDAC7-220ENST00000471235 CHURC1-FNTBB4DL54 471 aa20.43■□□□□ 0.86
HDAC7-220ENST00000471235 PRRT4C9JH25 899 aa20.43■□□□□ 0.86
HDAC7-220ENST00000471235 LAMTOR5O43504 91 aa20.43■□□□□ 0.86
HDAC7-220ENST00000471235 KIR2DL1P43626 348 aaPredicted RBP20.43■□□□□ 0.86
HDAC7-220ENST00000471235 CCR3P51677 355 aa20.43■□□□□ 0.86
HDAC7-220ENST00000471235 SATB1Q01826 763 aa20.43■□□□□ 0.86
HDAC7-220ENST00000471235 SLC18A3Q16572 532 aa20.43■□□□□ 0.86
HDAC7-220ENST00000471235 GEN1Q17RS7 908 aa20.43■□□□□ 0.86
HDAC7-220ENST00000471235 CCDC122Q5T0U0 273 aa20.43■□□□□ 0.86
HDAC7-220ENST00000471235 CFAP52Q8N1V2 620 aa20.43■□□□□ 0.86
HDAC7-220ENST00000471235 THAP2Q9H0W7 228 aa20.43■□□□□ 0.86
HDAC7-220ENST00000471235 DEF6Q9H4E7 631 aa20.43■□□□□ 0.86
HDAC7-220ENST00000471235 SNX10Q9Y5X0 201 aa20.43■□□□□ 0.86
HDAC7-220ENST00000471235 IRAK1P51617 712 aa20.42■□□□□ 0.86
HDAC7-220ENST00000471235 ZNF252P-AS1Q0IIN9 211 aa20.42■□□□□ 0.86
HDAC7-220ENST00000471235 AUHQ13825 339 aaKnown RBP20.42■□□□□ 0.86
HDAC7-220ENST00000471235 C2orf27AQ580R0 203 aa20.42■□□□□ 0.86
HDAC7-220ENST00000471235 EMC10Q5UCC4 262 aa20.42■□□□□ 0.86
HDAC7-220ENST00000471235 FBXL22Q6P050 247 aa20.42■□□□□ 0.86
HDAC7-220ENST00000471235 MAMSTRQ6ZN01 415 aa20.42■□□□□ 0.86
HDAC7-220ENST00000471235 ANKS1BQ7Z6G8 1248 aa20.42■□□□□ 0.86
HDAC7-220ENST00000471235 C14orf80Q86SX3 495 aa20.42■□□□□ 0.86
HDAC7-220ENST00000471235 CIR1Q86X95 450 aaPredicted RBP20.42■□□□□ 0.86
HDAC7-220ENST00000471235 CCDC26Q8TAB7 109 aa20.42■□□□□ 0.86
HDAC7-220ENST00000471235 CNPY3Q9BT09 278 aa20.42■□□□□ 0.86
HDAC7-220ENST00000471235 TRIM7Q9C029 511 aa20.42■□□□□ 0.86
HDAC7-220ENST00000471235 SIK2Q9H0K1 926 aa20.42■□□□□ 0.86
HDAC7-220ENST00000471235 HCN2Q9UL51 889 aa20.42■□□□□ 0.86
HDAC7-220ENST00000471235 VANGL2Q9ULK5 521 aa20.42■□□□□ 0.86
HDAC7-220ENST00000471235 PLXND1Q9Y4D7 1925 aa20.42■□□□□ 0.86
HDAC7-220ENST00000471235 TMEM191CA6NGB0 347 aa20.41■□□□□ 0.86
HDAC7-220ENST00000471235 LUC7L3O95232 432 aaKnown RBP20.41■□□□□ 0.86
HDAC7-220ENST00000471235 HLA-FP30511 346 aa20.41■□□□□ 0.86
HDAC7-220ENST00000471235 TIE1P35590 1138 aa20.41■□□□□ 0.86
HDAC7-220ENST00000471235 MRPS21P82921 87 aaKnown RBP20.41■□□□□ 0.86
HDAC7-220ENST00000471235 RABGAP1LQ5R372 815 aa20.41■□□□□ 0.86
HDAC7-220ENST00000471235 TTC39BQ5VTQ0 682 aaPredicted RBP20.41■□□□□ 0.86
HDAC7-220ENST00000471235 NUDT18Q6ZVK8 323 aa20.41■□□□□ 0.86
HDAC7-220ENST00000471235 MFN1Q8IWA4 741 aa20.41■□□□□ 0.86
HDAC7-220ENST00000471235 ZNF683Q8IZ20 524 aa20.41■□□□□ 0.86
HDAC7-220ENST00000471235 CCDC185Q8N715 623 aa20.41■□□□□ 0.86
HDAC7-220ENST00000471235 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.41■□□□□ 0.86
HDAC7-220ENST00000471235 IGSF8Q969P0 613 aa20.41■□□□□ 0.86
HDAC7-220ENST00000471235 ACDQ96AP0 544 aa20.41■□□□□ 0.86
HDAC7-220ENST00000471235 ARHGEF26Q96DR7 871 aa20.41■□□□□ 0.86
HDAC7-220ENST00000471235 RPRD1AQ96P16 312 aaPredicted RBP20.41■□□□□ 0.86
HDAC7-220ENST00000471235 NHEJ1Q9H9Q4 299 aaPredicted RBP20.41■□□□□ 0.86
HDAC7-220ENST00000471235 ZDHHC4Q9NPG8 344 aa20.41■□□□□ 0.86
HDAC7-220ENST00000471235 POLR3BQ9NW08 1133 aaPredicted RBP20.41■□□□□ 0.86
HDAC7-220ENST00000471235 AKR1B10O60218 316 aa20.4■□□□□ 0.86
HDAC7-220ENST00000471235 ATG13O75143 517 aa20.4■□□□□ 0.86
HDAC7-220ENST00000471235 PAPSS2O95340 614 aaPredicted RBP20.4■□□□□ 0.86
HDAC7-220ENST00000471235 TDGF1P13385 188 aa20.4■□□□□ 0.86
HDAC7-220ENST00000471235 PSMA2P25787 234 aa20.4■□□□□ 0.86
HDAC7-220ENST00000471235 CDC25BP30305 580 aa20.4■□□□□ 0.86
HDAC7-220ENST00000471235 CXCL12P48061 93 aa20.4■□□□□ 0.86
HDAC7-220ENST00000471235 GALCP54803 685 aa20.4■□□□□ 0.86
HDAC7-220ENST00000471235 PTPN5P54829 565 aa20.4■□□□□ 0.86
HDAC7-220ENST00000471235 C5orf22Q49AR2 442 aa20.4■□□□□ 0.86
HDAC7-220ENST00000471235 ARTNQ5T4W7 220 aa20.4■□□□□ 0.86
HDAC7-220ENST00000471235 EGFLAMQ63HQ2 1017 aa20.4■□□□□ 0.86
HDAC7-220ENST00000471235 TSSK4Q6SA08 328 aa20.4■□□□□ 0.86
HDAC7-220ENST00000471235 CARNMT1Q8N4J0 409 aa20.4■□□□□ 0.86
HDAC7-220ENST00000471235 ALLCQ8N6M5 410 aa20.4■□□□□ 0.86
HDAC7-220ENST00000471235 FNIP1Q8TF40 1166 aa20.4■□□□□ 0.86
HDAC7-220ENST00000471235 LMLNQ96KR4 655 aa20.4■□□□□ 0.86
HDAC7-220ENST00000471235 HAPLN3Q96S86 360 aa20.4■□□□□ 0.86
HDAC7-220ENST00000471235 MRPL47Q9HD33 250 aaKnown RBP20.4■□□□□ 0.86
HDAC7-220ENST00000471235 ABCB8Q9NUT2 735 aa20.4■□□□□ 0.86
HDAC7-220ENST00000471235 SPTLC3Q9NUV7 552 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms