RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 NPHS2Q9NP85 383 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 EIF2B3Q9NR50 452 aaKnown RBP8.25□□□□□ -1.09
SMC4-212ENST00000470240 ARHGEF3Q9NR81 526 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 GPATCH2LQ9NWQ4 482 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 MKS1Q9NXB0 559 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 RRN3Q9NYV6 651 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 TUBGCP4Q9UGJ1 667 aa8.25□□□□□ -1.09
SMC4-212ENST00000470240 RPL26L1Q9UNX3 145 aaKnown RBP8.25□□□□□ -1.09
SMC4-212ENST00000470240 PDCD11Q14690 1871 aaKnown RBP8.25□□□□□ -1.09
SMC4-212ENST00000470240 A0A0A0MRY4 1105 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.24□□□□□ -1.09
SMC4-212ENST00000470240 TCRBV7S3A2A0A539 114 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 ARHGEF37A1IGU5 675 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 C17orf102A2RUQ5 167 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 WDR91A4D1P6 747 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 MBLAC1A4D2B0 266 aaPredicted RBP8.24□□□□□ -1.09
SMC4-212ENST00000470240 A6NJY4 79 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 FOXO6A8MYZ6 492 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 TRIM49D1C9J1S8 452 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 GOLGA8RI6L899 631 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 AP3B1O00203 1094 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 PIRO00625 290 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 CAPN9O14815 690 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 KLF11O14901 512 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 NCAM2O15394 837 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 KPNA6O60684 536 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 GPR32O75388 356 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 FAM155BO75949 473 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 IL1BP01584 269 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 PDGFRBP09619 1106 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 FAM200BP0CF97 657 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 KCNE1P15382 129 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 WARSP23381 471 aaKnown RBP8.24□□□□□ -1.09
SMC4-212ENST00000470240 PRKCHP24723 683 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 L1CAMP32004 1257 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 MAP2K2P36507 400 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 PSMC4P43686 418 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 NEK3P51956 506 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 CRYBB1P53674 252 aaPredicted RBP8.24□□□□□ -1.09
SMC4-212ENST00000470240 SLC18A2Q05940 514 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 TMEM62Q0P6H9 643 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 FAAP100Q0VG06 881 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 IFRD2Q12894 506 aaPredicted RBP8.24□□□□□ -1.09
SMC4-212ENST00000470240 SEMA5AQ13591 1074 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 SNX17Q15036 470 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 TBCCQ15814 346 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 ZBTB6Q15916 424 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 SOWAHAQ2M3V2 549 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 ARL13BQ3SXY8 428 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 SLC25A52Q3SY17 297 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 GLRA4Q5JXX5 417 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 MARCH8Q5T0T0 291 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 SH3PXD2AQ5TCZ1 1133 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 TWF2Q6IBS0 349 aaKnown RBP8.24□□□□□ -1.09
SMC4-212ENST00000470240 TAF2Q6P1X5 1199 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 CASC4Q6P4E1 433 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 CYP4V2Q6ZWL3 525 aaPredicted RBP8.24□□□□□ -1.09
SMC4-212ENST00000470240 OTOAQ7RTW8 1153 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 TLK2Q86UE8 772 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 TMEM86AQ8N2M4 240 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 C2orf69Q8N8R5 385 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 B3GALNT2Q8NCR0 500 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 SLC2A14Q8TDB8 520 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 ACMSDQ8TDX5 336 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 HTR3CQ8WXA8 447 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 CENPIQ92674 756 aaPredicted RBP8.24□□□□□ -1.09
SMC4-212ENST00000470240 SPATA13Q96N96 652 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 CSPG4P5Q96PW8 444 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 EBNA1BP2Q99848 306 aaKnown RBP8.24□□□□□ -1.09
SMC4-212ENST00000470240 EIF2AQ9BY44 585 aaKnown RBP8.24□□□□□ -1.09
SMC4-212ENST00000470240 KATNBL1Q9H079 304 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 BRD8Q9H0E9 1235 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 R3HDMLQ9H3Y0 253 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 NXF3Q9H4D5 531 aaKnown RBP8.24□□□□□ -1.09
SMC4-212ENST00000470240 USP29Q9HBJ7 922 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 POPDC2Q9HBU9 364 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.24□□□□□ -1.094e-98■■■■■ 943.1
SMC4-212ENST00000470240 GGT7Q9UJ14 662 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 Q9Y3F1 56 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 TTLL3Q9Y4R7 772 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 PCDHA11Q9Y5I1 949 aa8.24□□□□□ -1.09
SMC4-212ENST00000470240 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.23□□□□□ -1.09
SMC4-212ENST00000470240 SMIM28A0A1B0GU29 152 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 GLTPD2A6NH11 291 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 SDR42E2A6NKP2 422 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 E7ENQ6 273 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 HGSO14964 777 aaPredicted RBP8.23□□□□□ -1.09
SMC4-212ENST00000470240 BIRC5O15392 142 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 CCDC22O60826 627 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 LUC7L3O95232 432 aaKnown RBP8.23□□□□□ -1.09
SMC4-212ENST00000470240 F9P00740 461 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 MYL3P08590 195 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 CCDC130P13994 396 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 NPR3P17342 541 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 PGAM1P18669 254 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 MX2P20592 715 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 LORP23490 312 aaPredicted RBP8.23□□□□□ -1.09
SMC4-212ENST00000470240 NOS2P35228 1153 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 SERPINB6P35237 376 aa8.23□□□□□ -1.09
SMC4-212ENST00000470240 SERPINB4P48594 390 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms