RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 LIMA1Q9UHB6 759 aaKnown RBP18.95■□□□□ 0.62
PHGDH-204ENST00000469443 XPO7Q9UIA9 1087 aaKnown RBP18.95■□□□□ 0.62
PHGDH-204ENST00000469443 ADAMTS9Q9P2N4 1935 aa18.94■□□□□ 0.62
PHGDH-204ENST00000469443 IGHV1OR15-9A0A0B4J2B8 117 aa18.94■□□□□ 0.62
PHGDH-204ENST00000469443 SLC30A4O14863 429 aa18.94■□□□□ 0.62
PHGDH-204ENST00000469443 DAB1O75553 588 aa18.94■□□□□ 0.62
PHGDH-204ENST00000469443 PRKCHP24723 683 aa18.94■□□□□ 0.62
PHGDH-204ENST00000469443 CD70P32970 193 aa18.94■□□□□ 0.62
PHGDH-204ENST00000469443 KLK7P49862 253 aa18.94■□□□□ 0.62
PHGDH-204ENST00000469443 COPB1P53618 953 aaKnown RBP18.94■□□□□ 0.62
PHGDH-204ENST00000469443 RPS24P62847 133 aaKnown RBP18.94■□□□□ 0.62
PHGDH-204ENST00000469443 TAF3Q5VWG9 929 aa18.94■□□□□ 0.62
PHGDH-204ENST00000469443 MBLAC2Q68D91 279 aa18.94■□□□□ 0.62
PHGDH-204ENST00000469443 KIAA1324Q6UXG2 1013 aaKnown RBP18.94■□□□□ 0.62
PHGDH-204ENST00000469443 SERPINA13PQ6UXR4 307 aa18.94■□□□□ 0.62
PHGDH-204ENST00000469443 MFN1Q8IWA4 741 aa18.94■□□□□ 0.62
PHGDH-204ENST00000469443 FIBINQ8TAL6 211 aa18.94■□□□□ 0.62
PHGDH-204ENST00000469443 MYEOVQ96EZ4 313 aa18.94■□□□□ 0.62
PHGDH-204ENST00000469443 PRDM16Q9HAZ2 1276 aa18.94■□□□□ 0.62
PHGDH-204ENST00000469443 DDIT4Q9NX09 232 aa18.94■□□□□ 0.62
PHGDH-204ENST00000469443 TMEM63CQ9P1W3 806 aa18.94■□□□□ 0.62
PHGDH-204ENST00000469443 SLC12A6Q9UHW9 1150 aa18.94■□□□□ 0.62
PHGDH-204ENST00000469443 DAAM1Q9Y4D1 1078 aa18.94■□□□□ 0.62
PHGDH-204ENST00000469443 KCNU1A8MYU2 1149 aa18.93■□□□□ 0.62
PHGDH-204ENST00000469443 AP5Z1O43299 807 aa18.93■□□□□ 0.62
PHGDH-204ENST00000469443 SYNCRIPO60506 623 aaKnown RBP18.93■□□□□ 0.62
PHGDH-204ENST00000469443 EPHX1P07099 455 aa18.93■□□□□ 0.62
PHGDH-204ENST00000469443 SLC2A3P11169 496 aa18.93■□□□□ 0.62
PHGDH-204ENST00000469443 TACR2P21452 398 aa18.93■□□□□ 0.62
PHGDH-204ENST00000469443 GABRB2P47870 512 aa18.93■□□□□ 0.62
PHGDH-204ENST00000469443 LIMK1P53667 647 aa18.93■□□□□ 0.62
PHGDH-204ENST00000469443 POLR2FP61218 127 aaKnown RBP18.93■□□□□ 0.62
PHGDH-204ENST00000469443 FNDC3BQ53EP0 1204 aaKnown RBP18.93■□□□□ 0.62
PHGDH-204ENST00000469443 RAP1GAP2Q684P5 730 aa18.93■□□□□ 0.62
PHGDH-204ENST00000469443 ARMCX6Q7L4S7 300 aa18.93■□□□□ 0.62
PHGDH-204ENST00000469443 NOP9Q86U38 636 aaKnown RBP18.93■□□□□ 0.62
PHGDH-204ENST00000469443 METTL3Q86U44 580 aaKnown RBP18.93■□□□□ 0.62
PHGDH-204ENST00000469443 CHSY1Q86X52 802 aa18.93■□□□□ 0.62
PHGDH-204ENST00000469443 CCDC117Q8IWD4 279 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-204ENST00000469443 LGI2Q8N0V4 545 aa18.93■□□□□ 0.62
PHGDH-204ENST00000469443 EPS8L1Q8TE68 723 aa18.93■□□□□ 0.62
PHGDH-204ENST00000469443 CYB5D2Q8WUJ1 264 aa18.93■□□□□ 0.62
PHGDH-204ENST00000469443 PIGKQ92643 395 aa18.93■□□□□ 0.62
PHGDH-204ENST00000469443 LMLNQ96KR4 655 aa18.93■□□□□ 0.62
PHGDH-204ENST00000469443 RXFP3Q9NSD7 469 aa18.93■□□□□ 0.62
PHGDH-204ENST00000469443 FAM207AQ9NSI2 230 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-204ENST00000469443 CYP8B1Q9UNU6 501 aa18.93■□□□□ 0.62
PHGDH-204ENST00000469443 PLA2G4CQ9UP65 541 aa18.93■□□□□ 0.62
PHGDH-204ENST00000469443 SIK3Q9Y2K2 1263 aa18.93■□□□□ 0.62
PHGDH-204ENST00000469443 CNOT1A5YKK6 2376 aaKnown RBP18.92■□□□□ 0.62
PHGDH-204ENST00000469443 SPTBN2O15020 2390 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 DOCK4Q8N1I0 1966 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 SYNJ2BP-COX16A0A087WUM0 186 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 LGALS16A8MUM7 142 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 LSM8O95777 96 aaKnown RBP18.92■□□□□ 0.62
PHGDH-204ENST00000469443 ATP5BP06576 529 aaKnown RBP18.92■□□□□ 0.62
PHGDH-204ENST00000469443 POLR2EP19388 210 aaKnown RBP18.92■□□□□ 0.62
PHGDH-204ENST00000469443 CCR1P32246 355 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 NOS2P35228 1153 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 PTGER3P43115 390 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 RPL6Q02878 288 aaKnown RBP18.92■□□□□ 0.62
PHGDH-204ENST00000469443 TYRO3Q06418 890 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 LMAN2Q12907 356 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 NCAPHQ15003 741 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 TCEAL6Q6IPX3 200 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 ERICH1Q86X53 443 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 CFAP52Q8N1V2 620 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 CARNMT1Q8N4J0 409 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 TCEAL3Q969E4 200 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 RNF34Q969K3 372 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 C18orf8Q96DM3 657 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 MKRN2Q9H000 416 aaKnown RBP18.92■□□□□ 0.62
PHGDH-204ENST00000469443 TMEM245Q9H330 911 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 NLRC4Q9NPP4 1024 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 RRN3Q9NYV6 651 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 COX16Q9P0S2 106 aa18.92■□□□□ 0.62
PHGDH-204ENST00000469443 NUMA1Q14980 2115 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 F5H5T6 163 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 EPHB6O15197 1021 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 GFPT2O94808 682 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 LUC7L3O95232 432 aaKnown RBP18.91■□□□□ 0.62
PHGDH-204ENST00000469443 DLDP09622 509 aaKnown RBP18.91■□□□□ 0.62
PHGDH-204ENST00000469443 HLA-EP13747 358 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 ZNF18P17022 549 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 CDK11BP21127 795 aaKnown RBP18.91■□□□□ 0.62
PHGDH-204ENST00000469443 ABCB4P21439 1286 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 SCNN1AP37088 669 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 DPP6P42658 865 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 MATKP42679 507 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 JAM2P57087 298 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 NOMO3P69849 1222 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 CAMK2GQ13555 558 aaPredicted RBP18.91■□□□□ 0.62
PHGDH-204ENST00000469443 CDH18Q13634 790 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 SYCP1Q15431 976 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 PTPRNQ16849 979 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 LYSMD4Q5XG99 296 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 ZNF677Q86XU0 584 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 TMPRSS6Q8IU80 811 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 MSANTD4Q8NCY6 345 aa18.91■□□□□ 0.62
PHGDH-204ENST00000469443 TTC17Q96AE7 1141 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms