RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 NOMO3P69849 1222 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 PITX1P78337 314 aaPredicted RBP13.46□□□□□ -0.25
CLRN1-204ENST00000468836 DEUP1Q05D60 604 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 ZNF234Q14588 700 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 TTC39BQ5VTQ0 682 aaPredicted RBP13.46□□□□□ -0.25
CLRN1-204ENST00000468836 RNF219Q5W0B1 726 aaPredicted RBP13.46□□□□□ -0.25
CLRN1-204ENST00000468836 MBLAC2Q68D91 279 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 NADSYN1Q6IA69 706 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 SLC36A4Q6YBV0 504 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 CYP2U1Q7Z449 544 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 CFAP52Q8N1V2 620 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 ZNF397Q8NF99 534 aaPredicted RBP13.46□□□□□ -0.25
CLRN1-204ENST00000468836 SLC20A1Q8WUM9 679 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 DDX1Q92499 740 aaKnown RBP13.46□□□□□ -0.25
CLRN1-204ENST00000468836 P2RY11Q96G91 374 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 DUSP15Q9H1R2 295 aaPredicted RBP13.46□□□□□ -0.25
CLRN1-204ENST00000468836 TMEM51Q9NW97 253 aa13.46□□□□□ -0.25
CLRN1-204ENST00000468836 KIAA1549LQ6ZVL6 1849 aa13.46□□□□□ -0.26
CLRN1-204ENST00000468836 USP34Q70CQ2 3546 aa13.46□□□□□ -0.26
CLRN1-204ENST00000468836 A0A1W2PQF6 199 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 LRRC10BA6NIK2 292 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 WASH3PC4AMC7 463 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 AP5Z1O43299 807 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 LUC7L3O95232 432 aaKnown RBP13.45□□□□□ -0.26
CLRN1-204ENST00000468836 F9P00740 461 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 IGLV3-25P01717 112 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 CHRM1P11229 460 aaPredicted RBP13.45□□□□□ -0.26
CLRN1-204ENST00000468836 NDUFV2P19404 249 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 BCKDHBP21953 392 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 MPLP40238 635 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 GABRB2P47870 512 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 CCDC6Q16204 474 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 CSRP2Q16527 193 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 PMS2CLQ68D20 193 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 KIAA1211LQ6NV74 962 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 PRR23CQ6ZRP0 262 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 MMS22LQ6ZRQ5 1243 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 XYLT1Q86Y38 959 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 DHX40Q8IX18 779 aaKnown RBP13.45□□□□□ -0.26
CLRN1-204ENST00000468836 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.45□□□□□ -0.26
CLRN1-204ENST00000468836 OLIG1Q8TAK6 271 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 CYB5D2Q8WUJ1 264 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 SORCS1Q8WY21 1168 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 RPRD1AQ96P16 312 aaPredicted RBP13.45□□□□□ -0.26
CLRN1-204ENST00000468836 C11orf70Q9BRQ4 267 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 WDCPQ9H6R7 721 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 PARD6AQ9NPB6 346 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 VPS45Q9NRW7 570 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 KIAA1522Q9P206 1035 aaPredicted RBP13.45□□□□□ -0.26
CLRN1-204ENST00000468836 XPO7Q9UIA9 1087 aaKnown RBP13.45□□□□□ -0.26
CLRN1-204ENST00000468836 NOCTQ9UK39 431 aaKnown RBP13.45□□□□□ -0.26
CLRN1-204ENST00000468836 HCN2Q9UL51 889 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 CYP8B1Q9UNU6 501 aa13.45□□□□□ -0.26
CLRN1-204ENST00000468836 NDUFS2O75306 463 aa13.44□□□□□ -0.26
CLRN1-204ENST00000468836 ASLP04424 464 aa13.44□□□□□ -0.26
CLRN1-204ENST00000468836 DLDP09622 509 aaKnown RBP13.44□□□□□ -0.26
CLRN1-204ENST00000468836 FERP16591 822 aa13.44□□□□□ -0.26
CLRN1-204ENST00000468836 DESP17661 470 aa13.44□□□□□ -0.26
CLRN1-204ENST00000468836 CD70P32970 193 aa13.44□□□□□ -0.26
CLRN1-204ENST00000468836 OXCT1P55809 520 aa13.44□□□□□ -0.26
CLRN1-204ENST00000468836 FMO1Q01740 532 aa13.44□□□□□ -0.26
CLRN1-204ENST00000468836 RPL6Q02878 288 aaKnown RBP13.44□□□□□ -0.26
CLRN1-204ENST00000468836 LMAN2Q12907 356 aa13.44□□□□□ -0.26
CLRN1-204ENST00000468836 SKOR2Q2VWA4 1001 aaPredicted RBP13.44□□□□□ -0.26
CLRN1-204ENST00000468836 FUT11Q495W5 492 aa13.44□□□□□ -0.26
CLRN1-204ENST00000468836 C2CD6Q53TS8 623 aa13.44□□□□□ -0.26
CLRN1-204ENST00000468836 BRMS1LQ5PSV4 323 aa13.44□□□□□ -0.26
CLRN1-204ENST00000468836 LRSAM1Q6UWE0 723 aa13.44□□□□□ -0.26
CLRN1-204ENST00000468836 ARMCX6Q7L4S7 300 aa13.44□□□□□ -0.26
CLRN1-204ENST00000468836 FIBINQ8TAL6 211 aa13.44□□□□□ -0.26
CLRN1-204ENST00000468836 PRCCQ92733 491 aaPredicted RBP13.44□□□□□ -0.26
CLRN1-204ENST00000468836 PPP1R9BQ96SB3 815 aa13.44□□□□□ -0.26
CLRN1-204ENST00000468836 SIK2Q9H0K1 926 aa13.44□□□□□ -0.26
CLRN1-204ENST00000468836 PRDM16Q9HAZ2 1276 aa13.44□□□□□ -0.26
CLRN1-204ENST00000468836 METTL5Q9NRN9 209 aaKnown RBP13.44□□□□□ -0.26
CLRN1-204ENST00000468836 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.44□□□□□ -0.26
CLRN1-204ENST00000468836 DMDP11532 3685 aa13.44□□□□□ -0.26
CLRN1-204ENST00000468836 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.43□□□□□ -0.26
CLRN1-204ENST00000468836 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.43□□□□□ -0.26
CLRN1-204ENST00000468836 A0A1B0GVM2 712 aa13.43□□□□□ -0.26
CLRN1-204ENST00000468836 ANKRD62A6NC57 917 aa13.43□□□□□ -0.26
CLRN1-204ENST00000468836 TCAF2A6NFQ2 919 aa13.43□□□□□ -0.26
CLRN1-204ENST00000468836 CAVIN2O95810 425 aa13.43□□□□□ -0.26
CLRN1-204ENST00000468836 CYP1A1P04798 512 aaPredicted RBP13.43□□□□□ -0.26
CLRN1-204ENST00000468836 HLA-EP13747 358 aa13.43□□□□□ -0.26
CLRN1-204ENST00000468836 PRKCHP24723 683 aa13.43□□□□□ -0.26
CLRN1-204ENST00000468836 RDXP35241 583 aaKnown RBP13.43□□□□□ -0.26
CLRN1-204ENST00000468836 NNMTP40261 264 aa13.43□□□□□ -0.26
CLRN1-204ENST00000468836 DPP6P42658 865 aa13.43□□□□□ -0.26
CLRN1-204ENST00000468836 PUM1Q14671 1186 aaKnown RBP eCLIP13.43□□□□□ -0.26
CLRN1-204ENST00000468836 RSPO4Q2I0M5 234 aaPredicted RBP13.43□□□□□ -0.26
CLRN1-204ENST00000468836 SLC25A52Q3SY17 297 aa13.43□□□□□ -0.26
CLRN1-204ENST00000468836 LYSMD4Q5XG99 296 aa13.43□□□□□ -0.26
CLRN1-204ENST00000468836 TMEM215Q68D42 235 aa13.43□□□□□ -0.26
CLRN1-204ENST00000468836 LRRC31Q6UY01 552 aa13.43□□□□□ -0.26
CLRN1-204ENST00000468836 CACUL1Q86Y37 369 aa13.43□□□□□ -0.26
CLRN1-204ENST00000468836 FANCMQ8IYD8 2048 aa13.43□□□□□ -0.26
CLRN1-204ENST00000468836 TMEFF1Q8IYR6 380 aa13.43□□□□□ -0.26
CLRN1-204ENST00000468836 SLC30A5Q8TAD4 765 aa13.43□□□□□ -0.26
CLRN1-204ENST00000468836 WFDC5Q8TCV5 224 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms