RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 SLC1A6P48664 564 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 SESN2P58004 480 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 ACTR3P61158 418 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 TEDDM1Q5T9Z0 273 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 STEAP4Q687X5 459 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 PACS1Q6VY07 963 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 ANKRD23Q86SG2 305 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 MYLK4Q86YV6 388 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 DRAXINQ8NBI3 349 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 ZNF778Q96MU6 729 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 C11orf84Q9BUA3 381 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 XPNPEP3Q9NQH7 507 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 MEI4A8MW99 385 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 GLRA3O75311 464 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 ALDH1A2O94788 518 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 RTN3O95197 1032 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 FGF3P11487 239 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 GOT1P17174 413 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 PAPOLAP51003 745 aaKnown RBP16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 USP4Q13107 963 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 PDE1CQ14123 709 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 SMAD1Q15797 465 aaKnown RBP16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 SOWAHAQ2M3V2 549 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 STXBP5Q5T5C0 1151 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 CWF19L1Q69YN2 538 aaKnown RBP16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 APLFQ8IW19 511 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 PYROXD2Q8N2H3 581 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 COLGALT1Q8NBJ5 622 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 NPLOC4Q8TAT6 608 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 ACMSDQ8TDX5 336 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 CENPIQ92674 756 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 CDKL2Q92772 493 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 LGMNQ99538 433 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 TTC1Q99614 292 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 C1orf21Q9H246 121 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 DPEP3Q9H4B8 488 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 SLC45A1Q9Y2W3 748 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 TRIP11Q15643 1979 aa16.24■□□□□ 0.19
TSPAN4-211ENST00000468468 A0A0A0MRY4 1105 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 HCRTO43612 131 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 AHCYL1O43865 530 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 BAG2O95816 211 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 AOC1P19801 751 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 ADORA2BP29275 332 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 FDFT1P37268 417 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 AP2B1P63010 937 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 NIPAL4Q0D2K0 466 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 DBN1Q16643 649 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 BSPRYQ5W0U4 402 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 MTHFD1LQ6UB35 978 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 SLC25A41Q8N5S1 370 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 SPATA13Q96N96 652 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 PPP1R12CQ9BZL4 782 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 PAPOLBQ9NRJ5 636 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 SORCS3Q9UPU3 1222 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 PLIN3O60664 434 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 DGKIO75912 1065 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 CELF2O95319 508 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 MLNP12872 115 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 MGAT1P26572 445 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 TUBB3Q13509 450 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 LAMB3Q13751 1172 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 GRB14Q14449 540 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 SLC26A9Q7LBE3 791 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 NETO2Q8NC67 525 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 ATP2A3Q93084 1043 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 EMID1Q96A84 441 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 FAM210AQ96ND0 272 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 SIKE1Q9BRV8 207 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 LMCD1Q9NZU5 365 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 SOX13Q9UN79 622 aa16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 APOBEC2Q9Y235 224 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-211ENST00000468468 SMIM24O75264 130 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 GRM5P41594 1212 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 PDE1BQ01064 536 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 MARCH8Q5T0T0 291 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 SPRYD7Q5W111 196 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 OR52E8Q6IFG1 317 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 LRRC8BQ6P9F7 803 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 ZNF467Q7Z7K2 595 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 ZMAT2Q96NC0 199 aaKnown RBP16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 NDE1Q9NXR1 346 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 DCDC2Q9UHG0 476 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 PSAT1Q9Y617 370 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 CENPFP49454 3210 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 MMP3P08254 477 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 PDGFRBP09619 1106 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 CCDC130P13994 396 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 CPOXP36551 454 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 ARL4AP40617 200 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 SLC25A3Q00325 362 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 PDCD2Q16342 344 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 PRAMEF19Q5SWL8 479 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 TRIM74Q86UV6 250 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 TRIM73Q86UV7 250 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 ZNF513Q8N8E2 541 aaPredicted RBP16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 OR6J1Q8NGC5 347 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 TSC22D3Q99576 134 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 TINF2Q9BSI4 451 aa16.22■□□□□ 0.19
TSPAN4-211ENST00000468468 CEP41Q9BYV8 373 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms