RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 ZDHHC16Q969W1 377 aa12.24□□□□□ -0.45
VPS26A-204ENST00000467852 P2RY11Q96G91 374 aa12.24□□□□□ -0.45
VPS26A-204ENST00000467852 RUSC1Q9BVN2 902 aa12.24□□□□□ -0.45
VPS26A-204ENST00000467852 SLC12A9Q9BXP2 914 aa12.24□□□□□ -0.45
VPS26A-204ENST00000467852 AGXT2Q9BYV1 514 aa12.24□□□□□ -0.45
VPS26A-204ENST00000467852 NCKIPSDQ9NZQ3 722 aa12.24□□□□□ -0.45
VPS26A-204ENST00000467852 SEL1LQ9UBV2 794 aa12.24□□□□□ -0.45
VPS26A-204ENST00000467852 U3KQA8 63 aa12.24□□□□□ -0.45
VPS26A-204ENST00000467852 A0A1W2PP55 124 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 RNASEH2AO75792 299 aaKnown RBP12.23□□□□□ -0.45
VPS26A-204ENST00000467852 CYBBP04839 570 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 PDGFRBP09619 1106 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 GIMD1P0DJR0 217 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 SLC6A4P31645 630 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 ATP5C1P36542 298 aaKnown RBP12.23□□□□□ -0.45
VPS26A-204ENST00000467852 AAMPQ13685 434 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 CDKN3Q16667 212 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 SOWAHAQ2M3V2 549 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 LACTB2Q53H82 288 aaPredicted RBP12.23□□□□□ -0.45
VPS26A-204ENST00000467852 MDH1BQ5I0G3 518 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 TMEM215Q68D42 235 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 SV2AQ7L0J3 742 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 RAB11FIP2Q7L804 512 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 DPH6Q7L8W6 267 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 LRRC52Q8N7C0 313 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 CACTINQ8WUQ7 758 aaKnown RBP12.23□□□□□ -0.45
VPS26A-204ENST00000467852 NANOS1Q8WY41 292 aaKnown RBP12.23□□□□□ -0.45
VPS26A-204ENST00000467852 KLHDC7BQ96G42 594 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 CATSPER2Q96P56 530 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 SLC2A11Q9BYW1 496 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 KLHL11Q9NVR0 708 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 FZD4Q9ULV1 537 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 ZNF510Q9Y2H8 683 aa12.23□□□□□ -0.45
VPS26A-204ENST00000467852 SCN8AQ9UQD0 1980 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 AKAP9Q99996 3911 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 TBC1D3DA0A087WVF3 549 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 TBC1D3IA0A087WXS9 549 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 TBC1D3EA0A087X179 549 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 TBC1D3KA0A087X1G2 549 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 TBC1D3FA6NER0 549 aaPredicted RBP12.22□□□□□ -0.45
VPS26A-204ENST00000467852 TBC1D3LB9A6J9 549 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 E9PMD0 336 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 TMX2-CTNND1H3BSU7 103 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 K7ESM1 405 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 SCAMP1O15126 338 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 PIAS2O75928 621 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 IL18RAPO95256 599 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 PIGRP01833 764 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 ZDHHC11BP0C7U3 371 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 TBC1D3HP0C7X1 549 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 PLCG1P19174 1290 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 NUDT1P36639 197 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 EVCP57679 992 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 TFAMQ00059 246 aaKnown RBP12.22□□□□□ -0.45
VPS26A-204ENST00000467852 POU5F1Q01860 360 aaKnown RBP12.22□□□□□ -0.45
VPS26A-204ENST00000467852 SPIDRQ14159 915 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 ADALQ6DHV7 355 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 TBC1D3GQ6DHY5 549 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 TBC1D3CQ6IPX1 549 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 CRTC1Q6UUV9 634 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 TBC1D3Q8IZP1 549 aaPredicted RBP12.22□□□□□ -0.45
VPS26A-204ENST00000467852 CSGALNACT2Q8N6G5 542 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 TEX19Q8NA77 164 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 OR14C36Q8NHC7 312 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 CYB5D2Q8WUJ1 264 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 JAKMIP1Q96N16 626 aaKnown RBP12.22□□□□□ -0.45
VPS26A-204ENST00000467852 STRADBQ9C0K7 418 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 ELOVL4Q9GZR5 314 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 RSPH9Q9H1X1 276 aaPredicted RBP12.22□□□□□ -0.45
VPS26A-204ENST00000467852 EPB41L5Q9HCM4 733 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 CASS4Q9NQ75 786 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 SERGEFQ9UGK8 458 aa12.22□□□□□ -0.45
VPS26A-204ENST00000467852 R3HCC1Q9Y3T6 440 aaKnown RBP12.22□□□□□ -0.45
VPS26A-204ENST00000467852 WNT7AO00755 349 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 DIAPH2O60879 1101 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 TBX18O95935 607 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 KRT19P08727 400 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 JMJD7P0C870 316 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 FECHP22830 423 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 GUCY2CP25092 1073 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 MCM7P33993 719 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 PLA2G4AP47712 749 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 CACNA2D1P54289 1103 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 RAD51AP2Q09MP3 1159 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 ZCCHC8Q6NZY4 707 aaKnown RBP12.21□□□□□ -0.45
VPS26A-204ENST00000467852 GUSBP11Q6P575 273 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 Q6ZNB5 142 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 SND1Q7KZF4 910 aaKnown RBP eCLIP12.21□□□□□ -0.45
VPS26A-204ENST00000467852 ZFAND4Q86XD8 727 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 SCAMP5Q8TAC9 235 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 TNFRSF25Q93038 417 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 ABHD17AQ96GS6 310 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 SLC24A3Q9HC58 644 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 TLR8Q9NR97 1041 aaKnown RBP12.21□□□□□ -0.45
VPS26A-204ENST00000467852 COMMD8Q9NX08 183 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 LARSQ9P2J5 1176 aaKnown RBP12.21□□□□□ -0.45
VPS26A-204ENST00000467852 DMTF1Q9Y222 760 aa12.21□□□□□ -0.45
VPS26A-204ENST00000467852 NIPBLQ6KC79 2804 aaeCLIP12.2□□□□□ -0.46
VPS26A-204ENST00000467852 SLC12A8A0AV02 714 aa12.2□□□□□ -0.46
VPS26A-204ENST00000467852 EME2A4GXA9 379 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms