RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 UBXN7O94888 489 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 ZBTB11O95625 1053 aaPredicted RBP4.32□□□□□ -1.72
XRN1-206ENST00000467077 IGLV2-11P01706 119 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 HTR1BP28222 390 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 VEGFCP49767 419 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 PDLIM4P50479 330 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 FMO1Q01740 532 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 Q0VFX4 171 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 KIF5AQ12840 1032 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 ARHGEF7Q14155 803 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 ZRSR1Q15695 479 aaKnown RBP4.32□□□□□ -1.72
XRN1-206ENST00000467077 GLE1Q53GS7 698 aaKnown RBP4.32□□□□□ -1.72
XRN1-206ENST00000467077 OTUD1Q5VV17 481 aaPredicted RBP4.32□□□□□ -1.72
XRN1-206ENST00000467077 ZNF449Q6P9G9 518 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 DHRS13Q6UX07 377 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 EPM2AIP1Q7L775 607 aaPredicted RBP4.32□□□□□ -1.72
XRN1-206ENST00000467077 FSTL5Q8N475 847 aaPredicted RBP4.32□□□□□ -1.72
XRN1-206ENST00000467077 ARL14EPQ8N8R7 260 aaPredicted RBP4.32□□□□□ -1.72
XRN1-206ENST00000467077 OR56A3Q8NH54 315 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 PPP1R35Q8TAP8 253 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 SLC35G2Q8TBE7 412 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 AKAP1Q92667 903 aaKnown RBP eCLIP4.32□□□□□ -1.72
XRN1-206ENST00000467077 TAAR9Q96RI9 348 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 ACO2Q99798 780 aaKnown RBP4.32□□□□□ -1.72
XRN1-206ENST00000467077 TRIM2Q9C040 744 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 SAP30LQ9HAJ7 183 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 GABBR1Q9UBS5 961 aa4.32□□□□□ -1.72
XRN1-206ENST00000467077 ABCC10Q5T3U5 1492 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 A0A1B0GVT2 93 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 CLEC18AA5D8T8 446 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 GAGE12JA6NER3 117 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 KCNQ3O43525 872 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 SPRY3O43610 288 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 KLKB1P03952 638 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 KITP10721 976 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 NDUFS1P28331 727 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 NTSR1P30989 418 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 HOXD12P35452 270 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 SEC61A1P61619 476 aaKnown RBP4.31□□□□□ -1.72
XRN1-206ENST00000467077 GPR18Q14330 331 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 KCNJ12Q14500 433 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 HMBOX1Q6NT76 420 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 DAAM2Q86T65 1068 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 CLEC18CQ8NCF0 446 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 CLMNQ96JQ2 1002 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 DUX5Q96PT3 197 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 SMURF2Q9HAU4 748 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 ERVK-5Q9HDB9 667 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 ADCY10Q96PN6 1610 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 HECW2Q9P2P5 1572 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 ABCA10Q8WWZ4 1543 aa4.31□□□□□ -1.72
XRN1-206ENST00000467077 FAM227AF5H4B4 570 aa4.3□□□□□ -1.72
XRN1-206ENST00000467077 PRYO14603 147 aa4.3□□□□□ -1.72
XRN1-206ENST00000467077 RGS14O43566 566 aa4.3□□□□□ -1.72
XRN1-206ENST00000467077 MARCH6O60337 910 aa4.3□□□□□ -1.72
XRN1-206ENST00000467077 GLUD1P00367 558 aa4.3□□□□□ -1.72
XRN1-206ENST00000467077 YY1P25490 414 aa4.3□□□□□ -1.72
XRN1-206ENST00000467077 DUSP1P28562 367 aa4.3□□□□□ -1.72
XRN1-206ENST00000467077 GLUD2P49448 558 aa4.3□□□□□ -1.72
XRN1-206ENST00000467077 GPS2Q13227 327 aa4.3□□□□□ -1.72
XRN1-206ENST00000467077 Q5PR19 223 aa4.3□□□□□ -1.72
XRN1-206ENST00000467077 MZT2AQ6P582 158 aa4.3□□□□□ -1.72
XRN1-206ENST00000467077 ZBTB34Q8NCN2 500 aa4.3□□□□□ -1.72
XRN1-206ENST00000467077 ZFPM2Q8WW38 1151 aa4.3□□□□□ -1.72
XRN1-206ENST00000467077 PRR11Q96HE9 360 aaPredicted RBP4.3□□□□□ -1.72
XRN1-206ENST00000467077 URB1-AS1Q96HZ7 61 aa4.3□□□□□ -1.72
XRN1-206ENST00000467077 DHX36Q9H2U1 1008 aaKnown RBP4.3□□□□□ -1.72
XRN1-206ENST00000467077 FAM83DQ9H4H8 585 aa4.3□□□□□ -1.72
XRN1-206ENST00000467077 LAMP3Q9UQV4 416 aa4.3□□□□□ -1.72
XRN1-206ENST00000467077 MAPKBP1O60336 1514 aa4.3□□□□□ -1.72
XRN1-206ENST00000467077 ADGRL1O94910 1474 aa4.3□□□□□ -1.72
XRN1-206ENST00000467077 NUP160Q12769 1436 aa4.29□□□□□ -1.72
XRN1-206ENST00000467077 PRG4Q92954 1404 aaPredicted RBP4.29□□□□□ -1.72
XRN1-206ENST00000467077 WDR81Q562E7 1941 aa4.29□□□□□ -1.72
XRN1-206ENST00000467077 WDR47O94967 919 aa4.29□□□□□ -1.72
XRN1-206ENST00000467077 S100BP04271 92 aaPredicted RBP4.29□□□□□ -1.72
XRN1-206ENST00000467077 MYBP10242 640 aa4.29□□□□□ -1.72
XRN1-206ENST00000467077 DGKQP52824 942 aa4.29□□□□□ -1.72
XRN1-206ENST00000467077 TRAF2Q12933 501 aa4.29□□□□□ -1.72
XRN1-206ENST00000467077 ANXA2RQ3ZCQ2 193 aa4.29□□□□□ -1.72
XRN1-206ENST00000467077 ASPHD1Q5U4P2 390 aa4.29□□□□□ -1.72
XRN1-206ENST00000467077 GRHL2Q6ISB3 625 aa4.29□□□□□ -1.72
XRN1-206ENST00000467077 CXorf57Q6NSI4 855 aaKnown RBP4.29□□□□□ -1.72
XRN1-206ENST00000467077 OVCH2Q7RTZ1 564 aa4.29□□□□□ -1.72
XRN1-206ENST00000467077 RHPN2Q8IUC4 686 aa4.29□□□□□ -1.72
XRN1-206ENST00000467077 CADM3Q8N126 398 aa4.29□□□□□ -1.72
XRN1-206ENST00000467077 FAM47BQ8NA70 645 aa4.29□□□□□ -1.72
XRN1-206ENST00000467077 CTCFLQ8NI51 663 aaPredicted RBP4.29□□□□□ -1.72
XRN1-206ENST00000467077 RUNDC1Q96C34 613 aa4.29□□□□□ -1.72
XRN1-206ENST00000467077 NT5C1BQ96P26 610 aa4.29□□□□□ -1.72
XRN1-206ENST00000467077 NOB1Q9ULX3 412 aaKnown RBP4.29□□□□□ -1.72
XRN1-206ENST00000467077 SPATA31A5Q5VU36 1347 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 SPATA31A7Q8IWB4 1347 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 RUSC2Q8N2Y8 1516 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 BECN2A8MW95 431 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 PYCARD-AS1I3L0S3 204 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 PRPF3O43395 683 aaKnown RBP4.28□□□□□ -1.72
XRN1-206ENST00000467077 CTNND1O60716 968 aaKnown RBP4.28□□□□□ -1.72
XRN1-206ENST00000467077 TUSC2O75896 110 aa4.28□□□□□ -1.72
XRN1-206ENST00000467077 SCGB1D2O95969 90 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms