RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 KRT71Q3SY84 523 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 C5orf22Q49AR2 442 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 SETMARQ53H47 684 aaPredicted RBP3.56□□□□□ -1.84
SNX4-202ENST00000465505 MEX3CQ5U5Q3 659 aaKnown RBP3.56□□□□□ -1.84
SNX4-202ENST00000465505 TRIM72Q6ZMU5 477 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 Q6ZWC4 215 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 TBC1D1Q86TI0 1168 aaPredicted RBP3.56□□□□□ -1.84
SNX4-202ENST00000465505 RPAP2Q8IXW5 612 aaPredicted RBP3.56□□□□□ -1.84
SNX4-202ENST00000465505 CEP57L1Q8IYX8 460 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 LRRC71Q8N4P6 559 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 AADATQ8N5Z0 425 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 ZBTB8BQ8NAP8 495 aaPredicted RBP3.56□□□□□ -1.84
SNX4-202ENST00000465505 PCSK9Q8NBP7 692 aaKnown RBP3.56□□□□□ -1.84
SNX4-202ENST00000465505 CCDC148Q8NFR7 591 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 TRIM58Q8NG06 486 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 CYP2W1Q8TAV3 490 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 CTNNBL1Q8WYA6 563 aaPredicted RBP3.56□□□□□ -1.84
SNX4-202ENST00000465505 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.56□□□□□ -1.84
SNX4-202ENST00000465505 ATP6V1E2Q96A05 226 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 NRBF2Q96F24 287 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 RBM17Q96I25 401 aaKnown RBP3.56□□□□□ -1.84
SNX4-202ENST00000465505 NAP1L3Q99457 506 aaPredicted RBP3.56□□□□□ -1.84
SNX4-202ENST00000465505 TMEM79Q9BSE2 394 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 THAP7Q9BT49 309 aaPredicted RBP3.56□□□□□ -1.84
SNX4-202ENST00000465505 KATNAL1Q9BW62 490 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 VPS16Q9H269 839 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 TAOK3Q9H2K8 898 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 VCX3BQ9H321 246 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 GLOD4Q9HC38 313 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 ELOVL5Q9NYP7 299 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 IL1RAPL1Q9NZN1 696 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 ITGB1BP2Q9UKP3 347 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 AGO2Q9UKV8 859 aaKnown RBP3.56□□□□□ -1.84
SNX4-202ENST00000465505 MTUS1Q9ULD2 1270 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 NDRG4Q9ULP0 352 aaKnown RBP3.56□□□□□ -1.84
SNX4-202ENST00000465505 AGTPBP1Q9UPW5 1226 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 PLEKHM1Q9Y4G2 1056 aa3.56□□□□□ -1.84
SNX4-202ENST00000465505 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.55□□□□□ -1.84
SNX4-202ENST00000465505 ABHD14A-ACY1A0A1B0GW23 586 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 PI4K2BG5E9Z4 385 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 H0YC42 278 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 TRIM38O00635 465 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 NCAM2O15394 837 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 PRPF3O43395 683 aaKnown RBP3.55□□□□□ -1.84
SNX4-202ENST00000465505 ZBTB14O43829 449 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 OFD1O75665 1012 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 SLITRK3O94933 977 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 SNUPNO95149 360 aaKnown RBP3.55□□□□□ -1.84
SNX4-202ENST00000465505 UNC5CO95185 931 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 PDE8BO95263 885 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 YEATS4O95619 227 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 NTN1O95631 604 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 DDX58O95786 925 aaKnown RBP3.55□□□□□ -1.84
SNX4-202ENST00000465505 OLFM2O95897 454 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 S100A6P06703 90 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 NPSP0C0P6 89 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 RHOXF2BP0C7M4 288 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 PCP11498 1178 aaKnown RBP3.55□□□□□ -1.84
SNX4-202ENST00000465505 HSD3B1P14060 373 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 TRIM21P19474 475 aaKnown RBP3.55□□□□□ -1.84
SNX4-202ENST00000465505 MUTP22033 750 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 PSMA4P25789 261 aaKnown RBP3.55□□□□□ -1.84
SNX4-202ENST00000465505 HSD17B2P37059 387 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 PDE6CP51160 858 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 FOXG1P55316 489 aaPredicted RBP3.55□□□□□ -1.84
SNX4-202ENST00000465505 HDAC4P56524 1084 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 SOX8P57073 446 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 AKAP17AQ02040 695 aaKnown RBP3.55□□□□□ -1.84
SNX4-202ENST00000465505 GRIK3Q13003 919 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 IKQ13123 557 aaPredicted RBP3.55□□□□□ -1.84
SNX4-202ENST00000465505 E2F2Q14209 437 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 ANKRD1Q15327 319 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 TRIP6Q15654 476 aaKnown RBP3.55□□□□□ -1.84
SNX4-202ENST00000465505 CCDC14Q49A88 953 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 SH2D4BQ5SQS7 431 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 TMEM240Q5SV17 173 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 FCRL6Q6DN72 434 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 AWAT2Q6E213 333 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 RGS7BPQ6MZT1 257 aaPredicted RBP3.55□□□□□ -1.84
SNX4-202ENST00000465505 CXorf57Q6NSI4 855 aaKnown RBP3.55□□□□□ -1.84
SNX4-202ENST00000465505 FAM180BQ6P0A1 224 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 KDELC1Q6UW63 502 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 LEKR1Q6ZMV7 388 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 FASTKD5Q7L8L6 764 aaKnown RBP3.55□□□□□ -1.84
SNX4-202ENST00000465505 SLC44A2Q8IWA5 706 aaPredicted RBP3.55□□□□□ -1.84
SNX4-202ENST00000465505 ESX1Q8N693 406 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 MSANTD4Q8NCY6 345 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 RASSF8Q8NHQ8 419 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 BRIX1Q8TDN6 353 aaKnown RBP3.55□□□□□ -1.84
SNX4-202ENST00000465505 PARD3BQ8TEW8 1205 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 R3HDM4Q96D70 268 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 SLC35A4Q96G79 324 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 RITA1Q96K30 269 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 COG8Q96MW5 612 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 RHOXF2Q9BQY4 288 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 LMAN2LQ9H0V9 348 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 RABEP2Q9H5N1 569 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 VCPKMTQ9H867 229 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 GPR108Q9NPR9 543 aa3.55□□□□□ -1.84
SNX4-202ENST00000465505 PDGFCQ9NRA1 345 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms