RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 FTSJ1Q9UET6 329 aa16.34■□□□□ 0.21
SND1-203ENST00000463020 INTS6Q9UL03 887 aaKnown RBP16.34■□□□□ 0.21
SND1-203ENST00000463020 A0A1B0GVL5 298 aa16.33■□□□□ 0.2
SND1-203ENST00000463020 FAM47DPA6NHR8 397 aa16.33■□□□□ 0.2
SND1-203ENST00000463020 PFKFB1P16118 471 aa16.33■□□□□ 0.2
SND1-203ENST00000463020 CTSOP43234 321 aaPredicted RBP16.33■□□□□ 0.2
SND1-203ENST00000463020 ADIGQ0VDE8 80 aa16.33■□□□□ 0.2
SND1-203ENST00000463020 FAM133BQ5BKY9 247 aaKnown RBP16.33■□□□□ 0.2
SND1-203ENST00000463020 KIAA0895LQ68EN5 471 aa16.33■□□□□ 0.2
SND1-203ENST00000463020 NADSYN1Q6IA69 706 aa16.33■□□□□ 0.2
SND1-203ENST00000463020 ANKRD52Q8NB46 1076 aa16.33■□□□□ 0.2
SND1-203ENST00000463020 UBA3Q8TBC4 463 aa16.33■□□□□ 0.2
SND1-203ENST00000463020 MRGPRX3Q96LB0 322 aa16.33■□□□□ 0.2
SND1-203ENST00000463020 UBXN6Q9BZV1 441 aa16.33■□□□□ 0.2
SND1-203ENST00000463020 IMPG2Q9BZV3 1241 aa16.33■□□□□ 0.2
SND1-203ENST00000463020 RSPH9Q9H1X1 276 aaPredicted RBP16.33■□□□□ 0.2
SND1-203ENST00000463020 PABPC3Q9H361 631 aaKnown RBP16.33■□□□□ 0.2
SND1-203ENST00000463020 CAAP1Q9H8G2 361 aa16.33■□□□□ 0.2
SND1-203ENST00000463020 TMEM8AQ9HCN3 771 aa16.33■□□□□ 0.2
SND1-203ENST00000463020 PIK3R2O00459 728 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 MAPK13O15264 365 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 PAPSS1O43252 624 aaPredicted RBP16.32■□□□□ 0.2
SND1-203ENST00000463020 CALUO43852 315 aaPredicted RBP16.32■□□□□ 0.2
SND1-203ENST00000463020 TBL1XO60907 577 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 SIN3BO75182 1162 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 F13A1P00488 732 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 CALCAP01258 141 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 DNTTP04053 509 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 DLDP09622 509 aaKnown RBP16.32■□□□□ 0.2
SND1-203ENST00000463020 COL5A1P20908 1838 aaPredicted RBP16.32■□□□□ 0.2
SND1-203ENST00000463020 ABCG1P45844 678 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 NUMBP49757 651 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 BCAT1P54687 386 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 GALCP54803 685 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 DNM1Q05193 864 aaKnown RBP16.32■□□□□ 0.2
SND1-203ENST00000463020 ZCWPW2Q504Y3 356 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 ADGRF1Q5T601 910 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 BSPRYQ5W0U4 402 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 NCEH1Q6PIU2 408 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 MMS22LQ6ZRQ5 1243 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 AHI1Q8N157 1196 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 ARHGAP18Q8N392 663 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 WFIKKN2Q8TEU8 576 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 CLEC4CQ8WTT0 213 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 TMA16Q96EY4 203 aaKnown RBP16.32■□□□□ 0.2
SND1-203ENST00000463020 PRORYQ9H606 182 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 TSPAN16Q9UKR8 245 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 PTPRQQ9UMZ3 2332 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 PLA2G4CQ9UP65 541 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 ZDHHC9Q9Y397 364 aa16.32■□□□□ 0.2
SND1-203ENST00000463020 A0A1W2PP55 124 aa16.31■□□□□ 0.2
SND1-203ENST00000463020 A0A1W2PPC4 97 aa16.31■□□□□ 0.2
SND1-203ENST00000463020 A0A1W2PR77 199 aa16.31■□□□□ 0.2
SND1-203ENST00000463020 ENC1O14682 589 aa16.31■□□□□ 0.2
SND1-203ENST00000463020 VILLO15195 856 aa16.31■□□□□ 0.2
SND1-203ENST00000463020 MID1O15344 667 aa16.31■□□□□ 0.2
SND1-203ENST00000463020 ZSCAN22P10073 491 aaPredicted RBP16.31■□□□□ 0.2
SND1-203ENST00000463020 EIF2S3P41091 472 aaKnown RBP16.31■□□□□ 0.2
SND1-203ENST00000463020 HARS2P49590 506 aaKnown RBP16.31■□□□□ 0.2
SND1-203ENST00000463020 ACADVLP49748 655 aa16.31■□□□□ 0.2
SND1-203ENST00000463020 METAP1P53582 386 aa16.31■□□□□ 0.2
SND1-203ENST00000463020 MCCD1P59942 119 aaPredicted RBP16.31■□□□□ 0.2
SND1-203ENST00000463020 SEMG2Q02383 582 aa16.31■□□□□ 0.2
SND1-203ENST00000463020 NFIL3Q16649 462 aa16.31■□□□□ 0.2
SND1-203ENST00000463020 PIK3R6Q5UE93 754 aa16.31■□□□□ 0.2
SND1-203ENST00000463020 ZNF776Q68DI1 518 aaPredicted RBP16.31■□□□□ 0.2
SND1-203ENST00000463020 INTS8Q75QN2 995 aaKnown RBP16.31■□□□□ 0.2
SND1-203ENST00000463020 ADAT2Q7Z6V5 191 aaKnown RBP16.31■□□□□ 0.2
SND1-203ENST00000463020 DHX40Q8IX18 779 aaKnown RBP16.31■□□□□ 0.2
SND1-203ENST00000463020 SAP25Q8TEE9 199 aa16.31■□□□□ 0.2
SND1-203ENST00000463020 CNDP2Q96KP4 475 aaKnown RBP16.31■□□□□ 0.2
SND1-203ENST00000463020 ELF4Q99607 663 aaPredicted RBP16.31■□□□□ 0.2
SND1-203ENST00000463020 ZSWIM1Q9BR11 485 aa16.31■□□□□ 0.2
SND1-203ENST00000463020 NEUROG2Q9H2A3 272 aa16.31■□□□□ 0.2
SND1-203ENST00000463020 SGK2Q9HBY8 427 aa16.31■□□□□ 0.2
SND1-203ENST00000463020 HBS1LQ9Y450 684 aaKnown RBP16.31■□□□□ 0.2
SND1-203ENST00000463020 TTC34A8MYJ7 566 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 XPO1O14980 1071 aaKnown RBP16.3■□□□□ 0.2
SND1-203ENST00000463020 MBD3O95983 291 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 IGLV3-27P01718 113 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 TRIM21P19474 475 aaKnown RBP16.3■□□□□ 0.2
SND1-203ENST00000463020 RACK1P63244 317 aaKnown RBP16.3■□□□□ 0.2
SND1-203ENST00000463020 ZBTB16Q05516 673 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 BNIP3Q12983 259 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 TARDBPQ13148 414 aaKnown RBP eCLIP16.3■□□□□ 0.2
SND1-203ENST00000463020 CBWD6Q4V339 395 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 FSCBQ5H9T9 825 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 CBWD3Q5JTY5 395 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 CBWD5Q5RIA9 395 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 C9orf64Q5T6V5 341 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 KRT39Q6A163 491 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 PCSK4Q6UW60 755 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 TMPRSS12Q86WS5 348 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 SMYD4Q8IYR2 804 aaPredicted RBP16.3■□□□□ 0.2
SND1-203ENST00000463020 AADATQ8N5Z0 425 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 EID2Q8N6I1 236 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 UBR7Q8N806 425 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 ACE2Q9BYF1 805 aaPredicted RBP16.3■□□□□ 0.2
SND1-203ENST00000463020 LMBRD1Q9NUN5 540 aa16.3■□□□□ 0.2
SND1-203ENST00000463020 RAB20Q9NX57 234 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms