RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 LDLRAD1Q5T700 205 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 SYPL2Q5VXT5 272 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 USP50Q70EL3 339 aaPredicted RBP17.41■□□□□ 0.38
ACTB-207ENST00000462494 RASSF3Q86WH2 238 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 ARNTL2Q8WYA1 636 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 ATP2A3Q93084 1043 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 FAM161BQ96MY7 647 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 MED10Q9BTT4 135 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 DUSP16Q9BY84 665 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 LRRC4Q9HBW1 653 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 TXNDC16Q9P2K2 825 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 STOML1Q9UBI4 398 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 NRCAMQ92823 1304 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 CCL15-CCL14A0A0B4J2E2 113 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 KCNK1O00180 336 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 XPOTO43592 962 aaKnown RBP17.41■□□□□ 0.38
ACTB-207ENST00000462494 ITM2AO43736 263 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 DAB1O75553 588 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 ERVK-10P10266 1014 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 MLH1P40692 756 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 DEUP1Q05D60 604 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 UBAP2LQ14157 1087 aaKnown RBP17.41■□□□□ 0.38
ACTB-207ENST00000462494 PDK1Q15118 436 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 CCL15Q16663 113 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 OTUD1Q5VV17 481 aaPredicted RBP17.41■□□□□ 0.38
ACTB-207ENST00000462494 C9orf131Q5VYM1 1079 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 CYS1Q717R9 158 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 PID1Q7Z2X4 250 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 ZNF567Q8N184 647 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 SIX6OS1Q8N1H7 587 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 ARHGAP24Q8N264 748 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 ADAM32Q8TC27 787 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 MICAL1Q8TDZ2 1067 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 AGAP3Q96P47 875 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 ZFATQ9P243 1243 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 RCOR3Q9P2K3 495 aaPredicted RBP17.41■□□□□ 0.38
ACTB-207ENST00000462494 EMCNQ9ULC0 261 aa17.41■□□□□ 0.38
ACTB-207ENST00000462494 SMIM35A0A1B0GVV1 85 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 EEF2KO00418 725 aaKnown RBP17.4■□□□□ 0.38
ACTB-207ENST00000462494 CAPN9O14815 690 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 ITGA2BP08514 1039 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 NOS2P35228 1153 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 ABL2P42684 1182 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 LILRA4P59901 499 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 MXRA7P84157 204 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 THOC5Q13769 683 aaKnown RBP17.4■□□□□ 0.38
ACTB-207ENST00000462494 HIC1Q14526 733 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 TSNAXIP1Q2TAA8 658 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 PPM1JQ5JR12 505 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 FAM91A1Q658Y4 838 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 IQSEC1Q6DN90 963 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 TMPRSS6Q8IU80 811 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 RBM15BQ8NDT2 890 aaKnown RBP17.4■□□□□ 0.38
ACTB-207ENST00000462494 DNAJC9Q8WXX5 260 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 LENG1Q96BZ8 264 aaPredicted RBP17.4■□□□□ 0.38
ACTB-207ENST00000462494 DNAJC16Q9Y2G8 782 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 PRR5-ARHGAP8B1AHC4 643 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 SPECC1L-ADORA2AF8WAN1 911 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 PPP1R12AO14974 1030 aaPredicted RBP17.4■□□□□ 0.38
ACTB-207ENST00000462494 GLRA3O75311 464 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 PSMG1O95456 288 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 GSRP00390 522 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 NPR3P17342 541 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 GMPRP36959 345 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 SLC1A6P48664 564 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 GLUD2P49448 558 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 ERFP50548 548 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 MAP3K7CLP57077 242 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 ARHGAP8P85298 464 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 WASHC5Q12768 1159 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 SNX17Q15036 470 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 MBLAC2Q68D91 279 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 HFE2Q6ZVN8 426 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 NPLOC4Q8TAT6 608 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 ATXN7L3BQ96GX2 97 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 HNRNPABQ99729 332 aaKnown RBP17.4■□□□□ 0.38
ACTB-207ENST00000462494 MMADHCQ9H3L0 296 aaPredicted RBP17.4■□□□□ 0.38
ACTB-207ENST00000462494 EIF2B3Q9NR50 452 aaKnown RBP17.4■□□□□ 0.38
ACTB-207ENST00000462494 PIGVQ9NUD9 493 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 TAGLN3Q9UI15 199 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 STAP1Q9ULZ2 295 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 SUFUQ9UMX1 484 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 MAGED2Q9UNF1 606 aaPredicted RBP17.4■□□□□ 0.38
ACTB-207ENST00000462494 RPS6KL1Q9Y6S9 549 aa17.4■□□□□ 0.38
ACTB-207ENST00000462494 ZNF638Q14966 1978 aaKnown RBP17.39■□□□□ 0.38
ACTB-207ENST00000462494 USP12O75317 370 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 SKAP2O75563 359 aaPredicted RBP17.39■□□□□ 0.37
ACTB-207ENST00000462494 POLBP06746 335 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 PDHA1P08559 390 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 ATP6V1C1P21283 382 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 WDR75Q8IWA0 830 aaKnown RBP17.39■□□□□ 0.37
ACTB-207ENST00000462494 ARRDC4Q8NCT1 418 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 SLC7A14Q8TBB6 771 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 ACMSDQ8TDX5 336 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 ZC3H15Q8WU90 426 aaKnown RBP17.39■□□□□ 0.37
ACTB-207ENST00000462494 CCDC106Q9BWC9 280 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 NMRK1Q9NWW6 199 aa17.39■□□□□ 0.37
ACTB-207ENST00000462494 KLHL8Q9P2G9 620 aaPredicted RBP17.39■□□□□ 0.37
ACTB-207ENST00000462494 NVLO15381 856 aaKnown RBP17.39■□□□□ 0.37
ACTB-207ENST00000462494 TREHO43280 583 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms