RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 C2orf15Q8WU43 125 aaKnown RBP7.01□□□□□ -1.29
MSH2-204ENST00000461394 HTR3CQ8WXA8 447 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 CPT1BQ92523 772 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 CASP10Q92851 521 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 NT5C3BQ969T7 300 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 TBC1D31Q96DN5 1066 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 PGAP3Q96FM1 320 aaPredicted RBP7.01□□□□□ -1.29
MSH2-204ENST00000461394 CFAP36Q96G28 342 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 PKNOX2Q96KN3 472 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 YME1L1Q96TA2 773 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 CAPS2Q9BXY5 557 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 ADAM7Q9H2U9 754 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 SMOC2Q9H3U7 446 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 CATSPERBQ9H7T0 1116 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 WDR6Q9NNW5 1121 aaKnown RBP7.01□□□□□ -1.29
MSH2-204ENST00000461394 TLR8Q9NR97 1041 aaKnown RBP7.01□□□□□ -1.29
MSH2-204ENST00000461394 AAASQ9NRG9 546 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 OLA1Q9NTK5 396 aaKnown RBP7.01□□□□□ -1.29
MSH2-204ENST00000461394 DTLQ9NZJ0 730 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 KLHL8Q9P2G9 620 aaPredicted RBP7.01□□□□□ -1.29
MSH2-204ENST00000461394 OR12D3Q9UGF7 316 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 PRKAG2Q9UGJ0 569 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 TBX21Q9UL17 535 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 SCML2Q9UQR0 700 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 COLQQ9Y215 455 aaPredicted RBP7.01□□□□□ -1.29
MSH2-204ENST00000461394 NFS1Q9Y697 457 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 USP3Q9Y6I4 520 aa7.01□□□□□ -1.29
MSH2-204ENST00000461394 GREB1Q4ZG55 1949 aa7□□□□□ -1.29
MSH2-204ENST00000461394 TCRBV7S3A2A0A539 114 aa7□□□□□ -1.29
MSH2-204ENST00000461394 SLC12A8A0AV02 714 aa7□□□□□ -1.29
MSH2-204ENST00000461394 ERICH4A6NGS2 130 aa7□□□□□ -1.29
MSH2-204ENST00000461394 SLC38A8A6NNN8 435 aa7□□□□□ -1.29
MSH2-204ENST00000461394 FAM72CH0Y354 149 aa7□□□□□ -1.29
MSH2-204ENST00000461394 RNF103O00237 685 aa7□□□□□ -1.29
MSH2-204ENST00000461394 TNFRSF10BO14763 440 aa7□□□□□ -1.29
MSH2-204ENST00000461394 CHADO15335 359 aa7□□□□□ -1.29
MSH2-204ENST00000461394 EIF3HO15372 352 aaKnown RBP eCLIP7□□□□□ -1.29
MSH2-204ENST00000461394 EFCAB14O75071 495 aa7□□□□□ -1.29
MSH2-204ENST00000461394 PAGE1O75459 146 aa7□□□□□ -1.29
MSH2-204ENST00000461394 BANF1O75531 89 aa7□□□□□ -1.29
MSH2-204ENST00000461394 ZNF189O75820 626 aaPredicted RBP7□□□□□ -1.29
MSH2-204ENST00000461394 DGKIO75912 1065 aa7□□□□□ -1.29
MSH2-204ENST00000461394 CPP00450 1065 aa7□□□□□ -1.29
MSH2-204ENST00000461394 AGTP01019 485 aa7□□□□□ -1.29
MSH2-204ENST00000461394 TIMP1P01033 207 aa7□□□□□ -1.29
MSH2-204ENST00000461394 URODP06132 367 aa7□□□□□ -1.29
MSH2-204ENST00000461394 APRTP07741 180 aa7□□□□□ -1.29
MSH2-204ENST00000461394 HSPA8P11142 646 aaKnown RBP7□□□□□ -1.29
MSH2-204ENST00000461394 SLC2A3P11169 496 aa7□□□□□ -1.29
MSH2-204ENST00000461394 CSF2RAP15509 400 aa7□□□□□ -1.29
MSH2-204ENST00000461394 LAG3P18627 525 aa7□□□□□ -1.29
MSH2-204ENST00000461394 MX2P20592 715 aa7□□□□□ -1.29
MSH2-204ENST00000461394 GBP2P32456 591 aaPredicted RBP7□□□□□ -1.29
MSH2-204ENST00000461394 ELF1P32519 619 aa7□□□□□ -1.29
MSH2-204ENST00000461394 OR1D2P34982 312 aa7□□□□□ -1.29
MSH2-204ENST00000461394 FDFT1P37268 417 aa7□□□□□ -1.29
MSH2-204ENST00000461394 GLUD2P49448 558 aa7□□□□□ -1.29
MSH2-204ENST00000461394 LBX1P52954 281 aa7□□□□□ -1.29
MSH2-204ENST00000461394 PPP2R2AP63151 447 aa7□□□□□ -1.29
MSH2-204ENST00000461394 DEFB103AP81534 67 aa7□□□□□ -1.29
MSH2-204ENST00000461394 SCAPQ12770 1279 aa7□□□□□ -1.29
MSH2-204ENST00000461394 SLC10A2Q12908 348 aaPredicted RBP7□□□□□ -1.29
MSH2-204ENST00000461394 TAF10Q12962 218 aa7□□□□□ -1.29
MSH2-204ENST00000461394 DUSP4Q13115 394 aa7□□□□□ -1.29
MSH2-204ENST00000461394 MTM1Q13496 603 aa7□□□□□ -1.29
MSH2-204ENST00000461394 DPYSQ14117 519 aa7□□□□□ -1.29
MSH2-204ENST00000461394 MRPL58Q14197 206 aaKnown RBP7□□□□□ -1.29
MSH2-204ENST00000461394 STAT4Q14765 748 aa7□□□□□ -1.29
MSH2-204ENST00000461394 PAFAH1B3Q15102 231 aaKnown RBP7□□□□□ -1.29
MSH2-204ENST00000461394 PKN2Q16513 984 aaKnown RBP7□□□□□ -1.29
MSH2-204ENST00000461394 FNBP1LQ5T0N5 605 aa7□□□□□ -1.29
MSH2-204ENST00000461394 FAM182AQ5T1J6 154 aa7□□□□□ -1.29
MSH2-204ENST00000461394 UBAP2Q5T6F2 1119 aaKnown RBP7□□□□□ -1.29
MSH2-204ENST00000461394 FAM72AQ5TYM5 149 aa7□□□□□ -1.29
MSH2-204ENST00000461394 C1orf53Q5VUE5 145 aa7□□□□□ -1.29
MSH2-204ENST00000461394 FAM72DQ6L9T8 149 aa7□□□□□ -1.29
MSH2-204ENST00000461394 LRRC31Q6UY01 552 aa7□□□□□ -1.29
MSH2-204ENST00000461394 DNAJC14Q6Y2X3 702 aaPredicted RBP7□□□□□ -1.29
MSH2-204ENST00000461394 KDM7AQ6ZMT4 941 aa7□□□□□ -1.29
MSH2-204ENST00000461394 BEND5Q7L4P6 421 aa7□□□□□ -1.29
MSH2-204ENST00000461394 TAOK1Q7L7X3 1001 aa7□□□□□ -1.29
MSH2-204ENST00000461394 BNIPLQ7Z465 357 aa7□□□□□ -1.29
MSH2-204ENST00000461394 TMCO2Q7Z6W1 182 aaPredicted RBP7□□□□□ -1.29
MSH2-204ENST00000461394 SCD5Q86SK9 330 aa7□□□□□ -1.29
MSH2-204ENST00000461394 TMEM173Q86WV6 379 aaPredicted RBP7□□□□□ -1.29
MSH2-204ENST00000461394 FAM72BQ86X60 149 aa7□□□□□ -1.29
MSH2-204ENST00000461394 MIB1Q86YT6 1006 aa7□□□□□ -1.29
MSH2-204ENST00000461394 ATP6V0D2Q8N8Y2 350 aa7□□□□□ -1.29
MSH2-204ENST00000461394 NAT8LQ8N9F0 302 aa7□□□□□ -1.29
MSH2-204ENST00000461394 ATP11CQ8NB49 1132 aa7□□□□□ -1.29
MSH2-204ENST00000461394 COLGALT1Q8NBJ5 622 aa7□□□□□ -1.29
MSH2-204ENST00000461394 FBXO36Q8NEA4 188 aa7□□□□□ -1.29
MSH2-204ENST00000461394 BCL7CQ8WUZ0 217 aaPredicted RBP7□□□□□ -1.29
MSH2-204ENST00000461394 IGSF21Q96ID5 467 aa7□□□□□ -1.29
MSH2-204ENST00000461394 LGMNQ99538 433 aa7□□□□□ -1.29
MSH2-204ENST00000461394 ZBED2Q9BTP6 218 aa7□□□□□ -1.29
MSH2-204ENST00000461394 CEP41Q9BYV8 373 aa7□□□□□ -1.29
MSH2-204ENST00000461394 ROPN1BQ9BZX4 212 aaPredicted RBP7□□□□□ -1.29
MSH2-204ENST00000461394 EPB41L4BQ9H329 900 aa7□□□□□ -1.29
MSH2-204ENST00000461394 CWH43Q9H720 699 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms