RNA–Protein interactions for RNA: ENST00000460584.1

LSG1-204, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 668 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-204ENST00000460584 CHST9Q7L1S5 443 aa11.87□□□□□ -0.51
LSG1-204ENST00000460584 TMPRSS7Q7RTY8 843 aa11.87□□□□□ -0.51
LSG1-204ENST00000460584 SLCO6A1Q86UG4 719 aa11.87□□□□□ -0.51
LSG1-204ENST00000460584 SLC39A13Q96H72 371 aa11.87□□□□□ -0.51
LSG1-204ENST00000460584 DHTKD1Q96HY7 919 aaPredicted RBP11.87□□□□□ -0.51
LSG1-204ENST00000460584 CEP63Q96MT8 703 aa11.87□□□□□ -0.51
LSG1-204ENST00000460584 ZSWIM1Q9BR11 485 aa11.87□□□□□ -0.51
LSG1-204ENST00000460584 RSPH9Q9H1X1 276 aaPredicted RBP11.87□□□□□ -0.51
LSG1-204ENST00000460584 C6orf106Q9H6K1 298 aaPredicted RBP11.87□□□□□ -0.51
LSG1-204ENST00000460584 ABCB8Q9NUT2 735 aa11.87□□□□□ -0.51
LSG1-204ENST00000460584 SFMBT1Q9UHJ3 866 aa11.87□□□□□ -0.51
LSG1-204ENST00000460584 EIF2B4Q9UI10 523 aaKnown RBP11.87□□□□□ -0.51
LSG1-204ENST00000460584 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.87□□□□□ -0.51
LSG1-204ENST00000460584 FNDC3AQ9Y2H6 1198 aaKnown RBP11.87□□□□□ -0.51
LSG1-204ENST00000460584 WDFY3Q8IZQ1 3526 aa11.87□□□□□ -0.51
LSG1-204ENST00000460584 DMXL2Q8TDJ6 3036 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 DFNA5O60443 496 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 ACSL4O60488 711 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 ASLP04424 464 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 FYNP06241 537 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 HLA-EP13747 358 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 PPP1R2P41236 205 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 SLC11A2P49281 568 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 ARID5AQ03989 594 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 SCAPQ12770 1279 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 SUZ12Q15022 739 aaKnown RBP11.86□□□□□ -0.51
LSG1-204ENST00000460584 TCERG1LQ5VWI1 586 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 MBLAC2Q68D91 279 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 PIAS4Q8N2W9 510 aaPredicted RBP11.86□□□□□ -0.51
LSG1-204ENST00000460584 UBA3Q8TBC4 463 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 STK32AQ8WU08 396 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 EDEM1Q92611 657 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 IGSF8Q969P0 613 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 ERLEC1Q96DZ1 483 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 BTBD1Q9H0C5 482 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 IL21RQ9HBE5 538 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 ADAMTS1Q9UHI8 967 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 TPX2Q9ULW0 747 aaKnown RBP11.86□□□□□ -0.51
LSG1-204ENST00000460584 ITIH6Q6UXX5 1313 aa11.86□□□□□ -0.51
LSG1-204ENST00000460584 APC2O95996 2303 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 A0A1B0GVT2 93 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 RNF225M0QZC1 329 aaPredicted RBP11.85□□□□□ -0.51
LSG1-204ENST00000460584 SART1O43290 800 aaKnown RBP11.85□□□□□ -0.51
LSG1-204ENST00000460584 MSI1O43347 362 aaKnown RBP11.85□□□□□ -0.51
LSG1-204ENST00000460584 SMC2O95347 1197 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 SEMA4FO95754 770 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 LTFP02788 710 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 CD19P15391 556 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 SLC6A4P31645 630 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 CD70P32970 193 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 CTSKP43235 329 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 VASPP50552 380 aaPredicted RBP11.85□□□□□ -0.51
LSG1-204ENST00000460584 SGSHP51688 502 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 MARSP56192 900 aaKnown RBP11.85□□□□□ -0.51
LSG1-204ENST00000460584 SFSWAPQ12872 951 aaKnown RBP11.85□□□□□ -0.51
LSG1-204ENST00000460584 EIF4EBP2Q13542 120 aaPredicted RBP11.85□□□□□ -0.51
LSG1-204ENST00000460584 TEAD4Q15561 434 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 KIF19Q2TAC6 998 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 HNRNPA1L2Q32P51 320 aaKnown RBP11.85□□□□□ -0.51
LSG1-204ENST00000460584 TTC31Q49AM3 519 aaPredicted RBP11.85□□□□□ -0.51
LSG1-204ENST00000460584 FNDC3BQ53EP0 1204 aaKnown RBP11.85□□□□□ -0.51
LSG1-204ENST00000460584 DCAF17Q5H9S7 520 aaPredicted RBP11.85□□□□□ -0.51
LSG1-204ENST00000460584 ZNF776Q68DI1 518 aaPredicted RBP11.85□□□□□ -0.51
LSG1-204ENST00000460584 NADSYN1Q6IA69 706 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 TMEM270Q6UE05 265 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 HJURPQ8NCD3 748 aaPredicted RBP11.85□□□□□ -0.51
LSG1-204ENST00000460584 SPRYD3Q8NCJ5 442 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 WFDC5Q8TCV5 224 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 CYB5D2Q8WUJ1 264 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 FAM131CQ96AQ9 280 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 BIRC7Q96CA5 298 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 FCRL2Q96LA5 508 aaPredicted RBP11.85□□□□□ -0.51
LSG1-204ENST00000460584 MRGPRX3Q96LB0 322 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 NT5C1BQ96P26 610 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 DDX50Q9BQ39 737 aaKnown RBP11.85□□□□□ -0.51
LSG1-204ENST00000460584 MIR1-1HGQ9H1L0 117 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 TM9SF3Q9HD45 589 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 RALYQ9UKM9 306 aaKnown RBP11.85□□□□□ -0.51
LSG1-204ENST00000460584 INTS6Q9UL03 887 aaKnown RBP11.85□□□□□ -0.51
LSG1-204ENST00000460584 TLR6Q9Y2C9 796 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 ANKRD6Q9Y2G4 727 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 GPSM3Q9Y4H4 160 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 SLCO1B1Q9Y6L6 691 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 ACACAQ13085 2346 aa11.85□□□□□ -0.51
LSG1-204ENST00000460584 TARSL2A2RTX5 802 aaKnown RBP11.84□□□□□ -0.51
LSG1-204ENST00000460584 E9PAM4 449 aa11.84□□□□□ -0.51
LSG1-204ENST00000460584 VILLO15195 856 aa11.84□□□□□ -0.51
LSG1-204ENST00000460584 DNTTP04053 509 aa11.84□□□□□ -0.51
LSG1-204ENST00000460584 IGHV4-34P06331 123 aa11.84□□□□□ -0.51
LSG1-204ENST00000460584 SRPRAP08240 638 aaKnown RBP11.84□□□□□ -0.51
LSG1-204ENST00000460584 POLR2EP19388 210 aaKnown RBP11.84□□□□□ -0.51
LSG1-204ENST00000460584 GPD2P43304 727 aa11.84□□□□□ -0.51
LSG1-204ENST00000460584 CSNK1EP49674 416 aaKnown RBP11.84□□□□□ -0.51
LSG1-204ENST00000460584 TBX4P57082 545 aa11.84□□□□□ -0.51
LSG1-204ENST00000460584 RACK1P63244 317 aaKnown RBP11.84□□□□□ -0.51
LSG1-204ENST00000460584 MS4A13Q5J8X5 152 aa11.84□□□□□ -0.51
LSG1-204ENST00000460584 TTI2Q6NXR4 508 aa11.84□□□□□ -0.51
LSG1-204ENST00000460584 PRICKLE1Q96MT3 831 aaPredicted RBP11.84□□□□□ -0.51
LSG1-204ENST00000460584 SERPINB11Q96P15 392 aa11.84□□□□□ -0.51
LSG1-204ENST00000460584 TRIM62Q9BVG3 475 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms