RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 FAF2Q96CS3 445 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 SNF8Q96H20 258 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 RNF157Q96PX1 679 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 WDCPQ9H6R7 721 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 CLIC5Q9NZA1 410 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.26□□□□□ -0.93
VPS50-207ENST00000458530 WHRNQ9P202 907 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 FNIP2Q9P278 1114 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 UXTQ9UBK9 157 aaPredicted RBP9.26□□□□□ -0.93
VPS50-207ENST00000458530 FZD10Q9ULW2 581 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 NAALADL1Q9UQQ1 740 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 ZNF148Q9UQR1 794 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 NR2E1Q9Y466 385 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 RAD54BQ9Y620 910 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 KMT2BQ9UMN6 2715 aaPredicted RBP9.26□□□□□ -0.93
VPS50-207ENST00000458530 DENND4CQ5VZ89 1909 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 VPS13AQ96RL7 3174 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 WDR87Q6ZQQ6 2873 aa9.26□□□□□ -0.93
VPS50-207ENST00000458530 OBSL1O75147 1896 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 DOCK4Q8N1I0 1966 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 SYNJ2BP-COX16A0A087WUM0 186 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 FAM92AA1XBS5 289 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 WDR27A2RRH5 827 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 SGK1O00141 431 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 EEF2KO00418 725 aaKnown RBP9.25□□□□□ -0.93
VPS50-207ENST00000458530 IRAK2O43187 625 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 DAPK3O43293 454 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 ZMYND10O75800 440 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 APOEP02649 317 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 CSH1P0DML2 217 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 CSH2P0DML3 217 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 L1CAMP32004 1257 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 CCR1P32246 355 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 OR1D2P34982 312 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 SERPINB6P35237 376 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 PTGIRP43119 386 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 ALDH1A3P47895 512 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 PPP3CCP48454 512 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 HCAR3P49019 387 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 CXCR3P49682 368 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 EIF3EP60228 445 aaKnown RBP9.25□□□□□ -0.93
VPS50-207ENST00000458530 DYNLT1P63172 113 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 OTUD4Q01804 1114 aaKnown RBP9.25□□□□□ -0.93
VPS50-207ENST00000458530 XRCC4Q13426 336 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 RAB33AQ14088 237 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 PPP2R5DQ14738 602 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 NOMO1Q15155 1222 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 TAF12Q16514 161 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 DDR2Q16832 855 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 BEND6Q5SZJ8 279 aaPredicted RBP9.25□□□□□ -0.93
VPS50-207ENST00000458530 SYPL2Q5VXT5 272 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 DUPD1Q68J44 220 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 SLC9A4Q6AI14 798 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 TTC27Q6P3X3 843 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 RNF19BQ6ZMZ0 732 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 BHLHA9Q7RTU4 235 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 PCGF5Q86SE9 256 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 TAC4Q86UU9 113 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 CDKL3Q8IVW4 592 aaPredicted RBP9.25□□□□□ -0.93
VPS50-207ENST00000458530 VPS52Q8N1B4 723 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 GOLGA6L1Q8N7Z2 621 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 ATAD1Q8NBU5 361 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 STKLD1Q8NE28 680 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 SCAMP5Q8TAC9 235 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 ZNF461Q8TAF7 563 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 SLC35B2Q8TB61 432 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 ACTL9Q8TC94 416 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 DQX1Q8TE96 717 aaKnown RBP9.25□□□□□ -0.93
VPS50-207ENST00000458530 AENQ8WTP8 325 aaKnown RBP9.25□□□□□ -0.93
VPS50-207ENST00000458530 CASKIN2Q8WXE0 1202 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 RSAD2Q8WXG1 361 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 ATG4AQ8WYN0 398 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 NDRG1Q92597 394 aaKnown RBP9.25□□□□□ -0.93
VPS50-207ENST00000458530 EDEM1Q92611 657 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 B3GALT6Q96L58 329 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 RUFY1Q96T51 708 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 FMO2Q99518 471 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 TRIM51Q9BSJ1 452 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 PHF7Q9BWX1 381 aaPredicted RBP9.25□□□□□ -0.93
VPS50-207ENST00000458530 FOXP3Q9BZS1 431 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 DPH5Q9H2P9 285 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 VIPAS39Q9H9C1 493 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 PCDH9Q9HC56 1237 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 PIGVQ9NUD9 493 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 DONSONQ9NYP3 566 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 IL37Q9NZH6 218 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 COX16Q9P0S2 106 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 SLC12A6Q9UHW9 1150 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 FBXW11Q9UKB1 542 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 LZTS1Q9Y250 596 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 USP15Q9Y4E8 981 aaPredicted RBP9.25□□□□□ -0.93
VPS50-207ENST00000458530 TPRP12270 2363 aaKnown RBP9.25□□□□□ -0.93
VPS50-207ENST00000458530 CLUHO75153 1309 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 ANAPC1Q9H1A4 1944 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 DNAH14Q0VDD8 3507 aa9.25□□□□□ -0.93
VPS50-207ENST00000458530 A0A1W2PQH9 124 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 ESYT3A0FGR9 886 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 SLC38A8A6NNN8 435 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 HACD1B0YJ81 288 aa9.24□□□□□ -0.93
VPS50-207ENST00000458530 C2CD2LO14523 706 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms