RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 SORCS2Q96PQ0 1159 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 MNTQ99583 582 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 BCL7BQ9BQE9 202 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 BHMT2Q9H2M3 363 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 HAUS4Q9H6D7 363 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 IFT22Q9H7X7 185 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 CERS4Q9HA82 394 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 CLK4Q9HAZ1 481 aaKnown RBP5.66□□□□□ -1.5
VPS41-209ENST00000457055 RXFP3Q9NSD7 469 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 COQ3Q9NZJ6 369 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 EHD3Q9NZN3 535 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 RBPJLQ9UBG7 517 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 ASH2LQ9UBL3 628 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 ADD3Q9UEY8 706 aaKnown RBP5.66□□□□□ -1.5
VPS41-209ENST00000457055 FETUBQ9UGM5 382 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 DSEQ9UL01 958 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 STK38LQ9Y2H1 464 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 ZDHHC9Q9Y397 364 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 CBY1Q9Y3M2 126 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 NPFFR2Q9Y5X5 522 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 ATP8B3O60423 1300 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 LAMC1P11047 1609 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 PLEKHG1Q9ULL1 1385 aa5.66□□□□□ -1.5
VPS41-209ENST00000457055 PI4KAP2A4QPH2 592 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 FAM83GA6ND36 823 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 LRRIQ3A6PVS8 624 aaPredicted RBP5.65□□□□□ -1.5
VPS41-209ENST00000457055 NDUFS8O00217 210 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 DAPK3O43293 454 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 BUB1O43683 1085 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 B4GALT4O60513 344 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 CBFA2T3O75081 653 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 PEX11AO75192 247 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 REC8O95072 547 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 LARGE1O95461 756 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 SGPL1O95470 568 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 CHRNA1P02708 482 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 MYBP10242 640 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 RFC1P35251 1148 aaPredicted RBP5.65□□□□□ -1.5
VPS41-209ENST00000457055 PSMC2P35998 433 aaKnown RBP5.65□□□□□ -1.5
VPS41-209ENST00000457055 PPARGP37231 505 aaPredicted RBP5.65□□□□□ -1.5
VPS41-209ENST00000457055 IARSP41252 1262 aaKnown RBP5.65□□□□□ -1.5
VPS41-209ENST00000457055 CPA2P48052 419 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 PMS2P54278 862 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 ALDH18A1P54886 795 aaKnown RBP5.65□□□□□ -1.5
VPS41-209ENST00000457055 TPM4P67936 248 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 GSTO1P78417 241 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 ARF5P84085 180 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 NCBP1Q09161 790 aaKnown RBP5.65□□□□□ -1.5
VPS41-209ENST00000457055 FOXO1Q12778 655 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 RALGDSQ12967 914 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 CAMK2DQ13557 499 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 EFTUD2Q15029 972 aaKnown RBP eCLIP5.65□□□□□ -1.53e-6■■■□□ 18.3
VPS41-209ENST00000457055 LLGL1Q15334 1064 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 PCBP1Q15365 356 aaKnown RBP eCLIP5.65□□□□□ -1.5
VPS41-209ENST00000457055 PCBP2Q15366 365 aaKnown RBP eCLIP5.65□□□□□ -1.53e-8■■■■■ 34.3
VPS41-209ENST00000457055 DPYSL2Q16555 572 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 FAM47CQ5HY64 1035 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 TOR1AIP1Q5JTV8 583 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 SLC35F1Q5T1Q4 408 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 SLFN13Q68D06 897 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 VASNQ6EMK4 673 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 CYP4F22Q6NT55 531 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 PGBD2Q6P3X8 592 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 CCDC62Q6P9F0 684 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 AAGABQ6PD74 315 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 TUBA3EQ6PEY2 450 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 PAPD4Q6PIY7 484 aaKnown RBP5.65□□□□□ -1.5
VPS41-209ENST00000457055 CRIP3Q6Q6R5 217 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 B3GNT9Q6UX72 402 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 FAM160B2Q86V87 743 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 OSTM1Q86WC4 334 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 CMTR2Q8IYT2 770 aaKnown RBP5.65□□□□□ -1.5
VPS41-209ENST00000457055 MAML2Q8IZL2 1156 aaPredicted RBP5.65□□□□□ -1.5
VPS41-209ENST00000457055 Q8N1X5 172 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 CCDC63Q8NA47 563 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 SHCBP1Q8NEM2 672 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 CDC26Q8NHZ8 85 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 BCAS4Q8TDM0 211 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 LZICQ8WZA0 190 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 ARHGAP45Q92619 1136 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 RRP36Q96EU6 259 aaKnown RBP5.65□□□□□ -1.5
VPS41-209ENST00000457055 C7orf26Q96N11 449 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 TAAR9Q96RI9 348 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 SMC6Q96SB8 1091 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 ATP6V0BQ99437 205 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 MPHOSPH9Q99550 1183 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 CCT7Q99832 543 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 CITED2Q99967 270 aaPredicted RBP5.65□□□□□ -1.5
VPS41-209ENST00000457055 SPXQ9BT56 116 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 TMEM120AQ9BXJ8 343 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 MTMR12Q9C0I1 747 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 SLC39A1Q9NY26 324 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 MAGED2Q9UNF1 606 aaPredicted RBP5.65□□□□□ -1.5
VPS41-209ENST00000457055 AURKCQ9UQB9 309 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 TCAF1Q9Y4C2 921 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 TIMM22Q9Y584 194 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 PCDHGA1Q9Y5H4 931 aa5.65□□□□□ -1.5
VPS41-209ENST00000457055 PLCH1Q4KWH8 1693 aa5.65□□□□□ -1.51
VPS41-209ENST00000457055 CASZ1Q86V15 1759 aa5.65□□□□□ -1.51
VPS41-209ENST00000457055 ZFYVE9O95405 1425 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms