RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	C2CD6	Q53TS8	623 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	OTUD1	Q5VV17	481 aa	Predicted RBP	10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	ZNF571	Q7Z3V5	609 aa	Predicted RBP	10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	TAC4	Q86UU9	113 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	C12orf40	Q86WS4	652 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	ERICH1	Q86X53	443 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	XYLT1	Q86Y38	959 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	MAML2	Q8IZL2	1156 aa	Predicted RBP	10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	PHTF2	Q8N3S3	785 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	PRSS33	Q8NF86	280 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	IPO4	Q8TEX9	1081 aa	Known RBP	10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	UBE2Q2	Q8WVN8	375 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	NT5C3B	Q969T7	300 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	C18orf8	Q96DM3	657 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	SLC39A13	Q96H72	371 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	FCRL2	Q96LA5	508 aa	Predicted RBP	10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	AGPAT1	Q99943	283 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	P2RY13	Q9BPV8	354 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	DCLK3	Q9C098	648 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	KCNH6	Q9H252	994 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	PDCL3	Q9H2J4	239 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	CHRD	Q9H2X0	955 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	LMAN1L	Q9HAT1	526 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	RBM12	Q9NTZ6	932 aa	Known RBP	10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	CALCOCO1	Q9P1Z2	691 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	RAPGEFL1	Q9UHV5	662 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	TMEM59L	Q9UK28	342 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	LSM7	Q9UK45	103 aa	Known RBP	10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	TLR6	Q9Y2C9	796 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	ZNF510	Q9Y2H8	683 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	FCF1	Q9Y324	198 aa	Known RBP	10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	JRKL	Q9Y4A0	524 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369	DMD	P11532	3685 aa		10.34	□□□□□ -0.75
CHEK2-221	ENST00000456369		A0A087X0T9	212 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	FAM170A	A1A519	330 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	NCAM2	O15394	837 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	IRAK2	O43187	625 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	CACNG3	O60359	315 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	GRAP2	O75791	330 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	LATS1	O95835	1130 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	EGF	P01133	1207 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	PENK	P01210	267 aa	Predicted RBP	10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	FAM228B	P0C875	321 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	JUND	P17535	347 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	DRD1	P21728	446 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	CHKA	P35790	457 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	MAGEA9	P43362	315 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	SLC6A11	P48066	632 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	HARS2	P49590	506 aa	Known RBP	10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	MMP16	P51512	607 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	GAD2	Q05329	585 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	CKAP4	Q07065	602 aa	Known RBP	10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	GRSF1	Q12849	480 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	CLEC16A	Q2KHT3	1053 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	DCAF6	Q58WW2	860 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	DGKK	Q5KSL6	1271 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	ADGRF1	Q5T601	910 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	OR6B2	Q6IFH4	312 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	TRNP1	Q6NT89	227 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	ALKBH5	Q6P6C2	394 aa	Known RBP	10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	MMS22L	Q6ZRQ5	1243 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369		Q6ZS52	159 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	ARC	Q7LC44	396 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	PHF13	Q86YI8	300 aa	Predicted RBP	10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	DENND1C	Q8IV53	801 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	DEFB106A	Q8N104	65 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	SYNPO	Q8N3V7	929 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	CPXM2	Q8N436	756 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	SLC30A5	Q8TAD4	765 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	ADAM32	Q8TC27	787 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	TSC1	Q92574	1164 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	UBXN4	Q92575	508 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	CD101	Q93033	1021 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	AZIN2	Q96A70	460 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	SERPINB11	Q96P15	392 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	NPY6R	Q99463	290 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	CARD6	Q9BX69	1037 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	SYNC	Q9H7C4	482 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	TRIM10	Q9UDY6	481 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	ADAMTS1	Q9UHI8	967 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	SAR1B	Q9Y6B6	198 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	TICRR	Q7Z2Z1	1910 aa		10.33	□□□□□ -0.76
CHEK2-221	ENST00000456369	TCRBV5S1A1T	A0A578	114 aa		10.32	□□□□□ -0.76
CHEK2-221	ENST00000456369	MACROD2	A1Z1Q3	448 aa		10.32	□□□□□ -0.76
CHEK2-221	ENST00000456369	KCNU1	A8MYU2	1149 aa		10.32	□□□□□ -0.76
CHEK2-221	ENST00000456369		K7EQS6	105 aa		10.32	□□□□□ -0.76
CHEK2-221	ENST00000456369	CAPN9	O14815	690 aa		10.32	□□□□□ -0.76
CHEK2-221	ENST00000456369	DAB1	O75553	588 aa		10.32	□□□□□ -0.76
CHEK2-221	ENST00000456369	DXO	O77932	396 aa	Known RBP	10.32	□□□□□ -0.76
CHEK2-221	ENST00000456369	TRUB2	O95900	331 aa	Known RBP	10.32	□□□□□ -0.76
CHEK2-221	ENST00000456369	TYR	P14679	529 aa		10.32	□□□□□ -0.76
CHEK2-221	ENST00000456369	TCP1	P17987	556 aa	Known RBP	10.32	□□□□□ -0.76
CHEK2-221	ENST00000456369	NOS2	P35228	1153 aa		10.32	□□□□□ -0.76
CHEK2-221	ENST00000456369	MATK	P42679	507 aa		10.32	□□□□□ -0.76
CHEK2-221	ENST00000456369	GSC	P56915	257 aa	Predicted RBP	10.32	□□□□□ -0.76
CHEK2-221	ENST00000456369	TBX4	P57082	545 aa		10.32	□□□□□ -0.76
CHEK2-221	ENST00000456369	MTAP	Q13126	283 aa		10.32	□□□□□ -0.76
CHEK2-221	ENST00000456369	FAM133B	Q5BKY9	247 aa	Known RBP	10.32	□□□□□ -0.76
CHEK2-221	ENST00000456369	FYB2	Q5VWT5	728 aa		10.32	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms