RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 SHMT1P34896 483 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 NUMBP49757 651 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 IST1P53990 364 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 ITGA9Q13797 1035 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 OXA1LQ15070 435 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 MBLAC2Q68D91 279 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 CES3Q6UWW8 571 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 TAS1R3Q7RTX0 852 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 CCDC65Q8IXS2 484 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 NLGN4XQ8N0W4 816 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 NDUFAF2Q8N183 169 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF597Q96LX8 424 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 GINM1Q9NU53 330 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 FBXO28Q9NVF7 368 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 DNAJB4Q9UDY4 337 aa4.68□□□□□ -1.66
DEPDC1-202ENST00000456315 A8MXQ7 604 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 H3BNH8 94 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 ERVH48-1M5A8F1 160 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 PPP6CO00743 305 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 SOCS2O14508 198 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 DHX15O43143 795 aaKnown RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 MAN1A2O60476 641 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 PROSCO94903 275 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 MT-CO1P00395 513 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 MMP8P22894 467 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 SMARCA1P28370 1054 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 CD6P30203 668 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 NOMO3P69849 1222 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 PCLAFQ15004 111 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 TMEM259Q4ZIN3 620 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 PERM1Q5SV97 790 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 FAM117BQ6P1L5 589 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF365Q70YC5 407 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 SH3BP5LQ7L8J4 393 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 CLVS1Q8IUQ0 354 aaPredicted RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 PIWIL2Q8TC59 973 aaKnown RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 STMN2Q93045 179 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 FBXL20Q96IG2 436 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 CTRCQ99895 268 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 FBRSL1Q9HCM7 1045 aaKnown RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 WDR37Q9Y2I8 494 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 GIT1Q9Y2X7 761 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 TTLL3Q9Y4R7 772 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 NFASCO94856 1347 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 DOT1LQ8TEK3 1739 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 E7ENX8 843 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 I6L893 689 aaPredicted RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 COL6A1P12109 1028 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 IDH3AP50213 366 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 SOWAHCQ53LP3 525 aaPredicted RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 EGFLAMQ63HQ2 1017 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 STYK1Q6J9G0 422 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 C15orf39Q6ZRI6 1047 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 TPH2Q8IWU9 490 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 PPM1NQ8N819 430 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 CCDC89Q8N998 374 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 ANO3Q9BYT9 981 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 KLC2Q9H0B6 622 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 C6orf50Q9HD87 102 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 PSMC3IPQ9P2W1 217 aaPredicted RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 PSMD13Q9UNM6 376 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 SSX2IPQ9Y2D8 614 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 DNAJC16Q9Y2G8 782 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 DTNAQ9Y4J8 743 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 GPC6Q9Y625 555 aaPredicted RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF318Q5VUA4 2279 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 hCG_1818297A0A087WSY0 165 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 NEMP2A6NFY4 417 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 TMEM191CA6NGB0 347 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 KLF11O14901 512 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 ACOX3O15254 700 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 PSMD10O75832 226 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 BPGMP07738 259 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 TMEM191BP0C7N4 346 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 KCNA5P22460 613 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 ACVR2AP27037 513 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 SOX11P35716 441 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 CDK9P50750 372 aaKnown RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 KLF10Q13118 480 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 CYLC2Q14093 348 aaPredicted RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 PDE1CQ14123 709 aaPredicted RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 ESPL1Q14674 2120 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 TIGD2Q4W5G0 525 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 NXNL2Q5VZ03 156 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 TXNDC11Q6PKC3 985 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 CYP2R1Q6VVX0 501 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 C16orf86Q6ZW13 317 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 RBM23Q86U06 439 aaKnown RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 RALGPS2Q86X27 583 aaPredicted RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 ERI1Q8IV48 349 aaKnown RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 ZNF444Q8N0Y2 327 aaPredicted RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 AHI1Q8N157 1196 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 FAM71DQ8N9W8 422 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 EXD1Q8NHP7 514 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 CANT1Q8WVQ1 401 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 LRTOMTQ8WZ04 291 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 SLITRK1Q96PX8 696 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 DOK1Q99704 481 aa4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 UNKQ9C0B0 810 aaKnown RBP4.67□□□□□ -1.66
DEPDC1-202ENST00000456315 SCHIP1Q9P0W5 487 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms