RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 HLA-FP30511 346 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 PTPN9P43378 593 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 CXCL12P48061 93 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 CXCR3P49682 368 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 NHLH1Q02575 133 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 CSTF1Q05048 431 aaKnown RBP7.31□□□□□ -1.24
COMMD1-205ENST00000455659 EIF4EBP2Q13542 120 aaPredicted RBP7.31□□□□□ -1.24
COMMD1-205ENST00000455659 DMC1Q14565 340 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 EIF4HQ15056 248 aaKnown RBP7.31□□□□□ -1.24
COMMD1-205ENST00000455659 GEN1Q17RS7 908 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 EGFLAMQ63HQ2 1017 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 TRMT11Q7Z4G4 463 aaKnown RBP7.31□□□□□ -1.24
COMMD1-205ENST00000455659 DNAAF5Q86Y56 855 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 CNGA4Q8IV77 575 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 CCDC117Q8IWD4 279 aaPredicted RBP7.31□□□□□ -1.24
COMMD1-205ENST00000455659 CHPFQ8IZ52 775 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 MAML2Q8IZL2 1156 aaPredicted RBP7.31□□□□□ -1.24
COMMD1-205ENST00000455659 AHI1Q8N157 1196 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 CFAP52Q8N1V2 620 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 CARNMT1Q8N4J0 409 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 CCDC33Q8N5R6 958 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 ZNF557Q8N988 423 aaPredicted RBP7.31□□□□□ -1.24
COMMD1-205ENST00000455659 TXNDC5Q8NBS9 432 aaKnown RBP7.31□□□□□ -1.24
COMMD1-205ENST00000455659 TSTD1Q8NFU3 115 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 WFDC5Q8TCV5 224 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 WFIKKN2Q8TEU8 576 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 USP33Q8TEY7 942 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 RXFP2Q8WXD0 754 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 ATOH1Q92858 354 aaPredicted RBP7.31□□□□□ -1.24
COMMD1-205ENST00000455659 NT5C3BQ969T7 300 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 AZIN2Q96A70 460 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 TMA16Q96EY4 203 aaKnown RBP7.31□□□□□ -1.24
COMMD1-205ENST00000455659 MYEOVQ96EZ4 313 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 PGAP3Q96FM1 320 aaPredicted RBP7.31□□□□□ -1.24
COMMD1-205ENST00000455659 RPRD1AQ96P16 312 aaPredicted RBP7.31□□□□□ -1.24
COMMD1-205ENST00000455659 DNAJC7Q99615 494 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 IRX2Q9BZI1 471 aaPredicted RBP7.31□□□□□ -1.24
COMMD1-205ENST00000455659 CIPCQ9C0C6 399 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 TKTL2Q9H0I9 626 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 ZDHHC4Q9NPG8 344 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 ABCB8Q9NUT2 735 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 ZNHIT6Q9NWK9 470 aaKnown RBP7.31□□□□□ -1.24
COMMD1-205ENST00000455659 C2orf42Q9NWW7 574 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 ARHGEF38Q9NXL2 777 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 ARHGAP20Q9P2F6 1191 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 CNOT8Q9UFF9 292 aaKnown RBP7.31□□□□□ -1.24
COMMD1-205ENST00000455659 GGA2Q9UJY4 613 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 VANGL2Q9ULK5 521 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 CLEC4EQ9ULY5 219 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 MMP17Q9ULZ9 603 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 SLC8A2Q9UPR5 921 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 SLC27A6Q9Y2P4 619 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 HS3ST4Q9Y661 456 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 SCINQ9Y6U3 715 aa7.31□□□□□ -1.24
COMMD1-205ENST00000455659 PTPRZ1P23471 2315 aaPredicted RBP7.3□□□□□ -1.24
COMMD1-205ENST00000455659 RALGAPA1Q6GYQ0 2036 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 CEP250Q9BV73 2442 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 TCRBV5S1A1TA0A578 114 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 ANTXRLA6NF34 631 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 CHURC1-FNTBB4DL54 471 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 PRRT4C9JH25 899 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 H0Y626 953 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 K7ESF4 209 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 AP5Z1O43299 807 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 RTN2O75298 545 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 APBB3O95704 486 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 FTLP02792 175 aaPredicted RBP7.3□□□□□ -1.24
COMMD1-205ENST00000455659 GZMAP12544 262 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 TDGF1P13385 188 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 PSMA2P25787 234 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 HNRNPH3P31942 346 aaKnown RBP7.3□□□□□ -1.24
COMMD1-205ENST00000455659 RFC1P35251 1148 aaPredicted RBP7.3□□□□□ -1.24
COMMD1-205ENST00000455659 PLA2G5P39877 138 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 TNFRSF4P43489 277 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 KIR2DL1P43626 348 aaPredicted RBP7.3□□□□□ -1.24
COMMD1-205ENST00000455659 ZNF75DP51815 510 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 ZNF143P52747 638 aaPredicted RBP7.3□□□□□ -1.24
COMMD1-205ENST00000455659 HDAC4P56524 1084 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 RPL7AP62424 266 aaKnown RBP7.3□□□□□ -1.24
COMMD1-205ENST00000455659 MRPS21P82921 87 aaKnown RBP7.3□□□□□ -1.24
COMMD1-205ENST00000455659 LMAN2Q12907 356 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 AUHQ13825 339 aaKnown RBP7.3□□□□□ -1.24
COMMD1-205ENST00000455659 TSR1Q2NL82 804 aaKnown RBP7.3□□□□□ -1.24
COMMD1-205ENST00000455659 ZNF528Q3MIS6 628 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 FUT11Q495W5 492 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 CCDC14Q49A88 953 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 HSF5Q4G112 596 aaPredicted RBP7.3□□□□□ -1.24
COMMD1-205ENST00000455659 EOGTQ5NDL2 527 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 PPP1R15BQ5SWA1 713 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 MPP7Q5T2T1 576 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 RNF43Q68DV7 783 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 HEATR6Q6AI08 1181 aaKnown RBP7.3□□□□□ -1.24
COMMD1-205ENST00000455659 ANO7Q6IWH7 933 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 CHST9Q7L1S5 443 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 SYT13Q7L8C5 426 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 STRADAQ7RTN6 431 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 BNIPLQ7Z465 357 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 GAS2L3Q86XJ1 694 aa7.3□□□□□ -1.24
COMMD1-205ENST00000455659 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.3□□□□□ -1.24
COMMD1-205ENST00000455659 IL17RCQ8NAC3 791 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms