RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 ANKS1BQ7Z6G8 1248 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 C14orf80Q86SX3 495 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 BBS7Q8IWZ6 715 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 CPXM2Q8N436 756 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 RNF25Q96BH1 459 aaPredicted RBP17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 EPAS1Q99814 870 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 DDX50Q9BQ39 737 aaKnown RBP17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 ZFP14Q9HCL3 533 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 CWC15Q9P013 229 aaKnown RBP17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 SAR1BQ9Y6B6 198 aa17.15■□□□□ 0.34
CCDC90B-202ENST00000455220 IGLV3-10A0A075B6K4 115 aa17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 GOLGA6L7A0A1B0GV03 622 aa17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 HEPACAM2A8MVW5 462 aa17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 E9PAM4 449 aa17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 CXCR5P32302 372 aa17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 ZNF211Q13398 564 aaPredicted RBP17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 PUS10Q3MIT2 529 aaKnown RBP17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 ODF2Q5BJF6 829 aa17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 TANGO2Q6ICL3 276 aa17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 FBXL22Q6P050 247 aa17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 CHSY1Q86X52 802 aa17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 KIF18AQ8NI77 898 aa17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 BPIFB1Q8TDL5 484 aa17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 ELSPBP1Q96BH3 223 aa17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 OTUB2Q96DC9 234 aa17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 CSPG4P5Q96PW8 444 aa17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 PHF7Q9BWX1 381 aaPredicted RBP17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 CALN1Q9BXU9 219 aa17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 TBC1D14Q9P2M4 693 aa17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 PPARGC1AQ9UBK2 798 aaKnown RBP17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 EFR3BQ9Y2G0 817 aa17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 DOCK4Q8N1I0 1966 aa17.14■□□□□ 0.33
CCDC90B-202ENST00000455220 hCG_1818297A0A087WSY0 165 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 DRGXA6NNA5 263 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 F5H5T6 163 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 H3BRJ5 948 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 EEF2KO00418 725 aaKnown RBP17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 SCAMP3O14828 347 aaKnown RBP17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 CREB3O43889 395 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 ECI2O75521 394 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 GOT1P17174 413 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 ARL4AP40617 200 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 DPYSQ14117 519 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 TFDP3Q5H9I0 405 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 SEL1L2Q5TEA6 688 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 AADACL2Q6P093 401 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 RFX8Q6ZV50 586 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 MTSS1LQ765P7 747 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 CCDC50Q8IVM0 306 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 RASGEF1CQ8N431 466 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 TTC16Q8NEE8 873 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 COG1Q8WTW3 980 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 TBC1D31Q96DN5 1066 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 PRICKLE1Q96MT3 831 aaPredicted RBP17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 VANGL2Q9ULK5 521 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 UNC80Q8N2C7 3258 aa17.13■□□□□ 0.33
CCDC90B-202ENST00000455220 ANHXE9PGG2 379 aa17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 SLC9A3R1O14745 358 aaPredicted RBP17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 CHKAP35790 457 aa17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 TPI1P60174 286 aa17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 FCHO2Q0JRZ9 810 aa17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 MMRN1Q13201 1228 aa17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 ANKRD20A8PQ5CZ79 823 aa17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 PTCRAQ6ISU1 281 aaPredicted RBP17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 RFWD3Q6PCD5 774 aa17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 PARM1Q6UWI2 310 aa17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 VITQ6UXI7 678 aa17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 LRRC31Q6UY01 552 aa17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 MFSD6LQ8IWD5 586 aa17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 TDRD5Q8NAT2 981 aaKnown RBP17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 PCDH19Q8TAB3 1148 aa17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 ZNF592Q92610 1267 aa17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 FGF14Q92915 247 aa17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 MYEOVQ96EZ4 313 aa17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 RNF157Q96PX1 679 aa17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 OSBPL8Q9BZF1 889 aa17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 TTC7AQ9ULT0 858 aaPredicted RBP17.12■□□□□ 0.33
CCDC90B-202ENST00000455220 C2CD4DB7Z1M9 353 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 SRGAP2O75044 1071 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 CETN2P41208 172 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 HTR4Q13639 388 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 LGI2Q8N0V4 545 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 DEPDC1BQ8WUY9 529 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 OSCP1Q8WVF1 389 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 IGSF8Q969P0 613 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 HERPUD2Q9BSE4 406 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 PRDM16Q9HAZ2 1276 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 ARHGEF4Q9NR80 690 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 NR2E1Q9Y466 385 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 COL6A3P12111 3177 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 WASH4PA8MWX3 477 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 FGF10O15520 208 aaPredicted RBP17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 CEP104O60308 925 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 EPHB2P29323 1055 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 RABGAP1LQ5R372 815 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 RNF43Q68DV7 783 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 SLC9A4Q6AI14 798 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 PQLC3Q8N755 202 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 ACTRT1Q8TDG2 376 aa17.11■□□□□ 0.33
CCDC90B-202ENST00000455220 RPRD1AQ96P16 312 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms