RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 DCHS1Q96JQ0 3298 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 DCDC2BA2VCK2 349 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 WASH3PC4AMC7 463 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 ARHGAP6O43182 974 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 LTFP02788 710 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 CYBBP04839 570 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 PLEKP08567 350 aaPredicted RBP17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 CHRNB2P17787 502 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 MPLP40238 635 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 HARS2P49590 506 aaKnown RBP17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 GEN1Q17RS7 908 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 SDE2Q6IQ49 451 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 KIAA1211LQ6NV74 962 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 ERMP1Q7Z2K6 904 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 CPXM2Q8N436 756 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 OLIG1Q8TAK6 271 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 IRGQQ8WZA9 623 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 RXFP3Q9NSD7 469 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 CACNA2D2Q9NY47 1150 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 ADAMTS1Q9UHI8 967 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 CYTH4Q9UIA0 394 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 PYCARDQ9ULZ3 195 aa17.71■□□□□ 0.43
PRPF40A-204ENST00000450303 A0A1W2PQF6 199 aa17.7■□□□□ 0.42
PRPF40A-204ENST00000450303 ZNF806P0C7X5 589 aa17.7■□□□□ 0.42
PRPF40A-204ENST00000450303 GZMAP12544 262 aa17.7■□□□□ 0.42
PRPF40A-204ENST00000450303 GABRG2P18507 467 aa17.7■□□□□ 0.42
PRPF40A-204ENST00000450303 P2RY2P41231 377 aa17.7■□□□□ 0.42
PRPF40A-204ENST00000450303 SPA17Q15506 151 aa17.7■□□□□ 0.42
PRPF40A-204ENST00000450303 SLC18A3Q16572 532 aa17.7■□□□□ 0.42
PRPF40A-204ENST00000450303 AASDHQ4L235 1098 aaPredicted RBP17.7■□□□□ 0.42
PRPF40A-204ENST00000450303 PMS2CLQ68D20 193 aa17.7■□□□□ 0.42
PRPF40A-204ENST00000450303 PASD1Q8IV76 773 aa17.7■□□□□ 0.42
PRPF40A-204ENST00000450303 FAM217AQ8IXS0 508 aa17.7■□□□□ 0.42
PRPF40A-204ENST00000450303 C12orf50Q8NA57 414 aaPredicted RBP17.7■□□□□ 0.42
PRPF40A-204ENST00000450303 GOLGA1Q92805 767 aa17.7■□□□□ 0.42
PRPF40A-204ENST00000450303 SYT11Q9BT88 431 aa17.7■□□□□ 0.42
PRPF40A-204ENST00000450303 EPN1Q9Y6I3 576 aaPredicted RBP17.7■□□□□ 0.42
PRPF40A-204ENST00000450303 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 GOLGA6L7A0A1B0GV03 622 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 MED19A0JLT2 244 aaPredicted RBP17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 DDX3XO00571 662 aaKnown RBP eCLIP17.69■□□□□ 0.421e-15■■□□□ 12.1
PRPF40A-204ENST00000450303 MAP3K13O43283 966 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 CCP110O43303 1012 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 FBXO21O94952 628 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 CYP1A1P04798 512 aaPredicted RBP17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 FYNP06241 537 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 NCAM1P13591 858 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 SDHBP21912 280 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 CDH5P33151 784 aaPredicted RBP17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 NSFP46459 744 aaKnown RBP17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 DHPSP49366 369 aaPredicted RBP17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 CLEC16AQ2KHT3 1053 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 PLA2G2CQ5R387 149 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 CCDC122Q5T0U0 273 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 TCEAL6Q6IPX3 200 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 ACAD10Q6JQN1 1059 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 MSANTD2Q6P1R3 559 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 ARMCX6Q7L4S7 300 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 TMEM139Q8IV31 216 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 TMEFF1Q8IYR6 380 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 TXLNBQ8N3L3 684 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 SLC30A5Q8TAD4 765 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 IPO4Q8TEX9 1081 aaKnown RBP17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 TCEAL3Q969E4 200 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 FAM149B1Q96BN6 582 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 PIWIL1Q96J94 861 aaKnown RBP17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 SLC6A17Q9H1V8 727 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 MBD1Q9UIS9 605 aaPredicted RBP17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 NAALADL1Q9UQQ1 740 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 SLC27A6Q9Y2P4 619 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 PCDHGA5Q9Y5G8 931 aa17.69■□□□□ 0.42
PRPF40A-204ENST00000450303 CEP192Q8TEP8 1941 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 BCLAF3A2AJT9 711 aaKnown RBP17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 SOWAHDA6NJG2 315 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 EIF3CLB5ME19 914 aaKnown RBP17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 RTN2O75298 545 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 NDUFA10O95299 355 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 ACADSBP45954 432 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 SGSHP51688 502 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 TBX4P57082 545 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 NOMO3P69849 1222 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 KRT83P78385 493 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 ASTE1Q2TB18 679 aaPredicted RBP17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 MAP7D1Q3KQU3 841 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 MPPE1Q53F39 396 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 NAA35Q5VZE5 725 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 ALKBH5Q6P6C2 394 aaKnown RBP17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 RFWD3Q6PCD5 774 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 ERICH1Q86X53 443 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 DEFB119Q8N690 84 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 ADAM32Q8TC27 787 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 NETO1Q8TDF5 533 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 STK32AQ8WU08 396 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 SORCS1Q8WY21 1168 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 TMA16Q96EY4 203 aaKnown RBP17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 PCDHB18PQ96TA0 734 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 EIF3CQ99613 913 aaKnown RBP17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 GABRG3Q99928 467 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 RTKNQ9BST9 563 aa17.68■□□□□ 0.42
PRPF40A-204ENST00000450303 SLC4A5Q9BY07 1137 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms