RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 CASRP41180 1078 aa13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 HARS2P49590 506 aaKnown RBP13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 TOB1P50616 345 aaPredicted RBP13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 COG7P83436 770 aa13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 TMEM119Q4V9L6 283 aa13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 CHST9Q7L1S5 443 aa13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 DYMQ7RTS9 669 aa13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 PRPF39Q86UA1 669 aaKnown RBP13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 FAM35AQ86V20 835 aa13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 ZSCAN1Q8NBB4 408 aa13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 WFIKKN2Q8TEU8 576 aa13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 HVCN1Q96D96 273 aa13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 USP29Q9HBJ7 922 aa13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 UCKL1Q9NWZ5 548 aa13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 FZD4Q9ULV1 537 aa13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 KIF26BQ2KJY2 2108 aa13.16□□□□□ -0.3
AC004540.1-204ENST00000449537 TBC1D3DA0A087WVF3 549 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 TBC1D3IA0A087WXS9 549 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 TBC1D3EA0A087X179 549 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 TBC1D3KA0A087X1G2 549 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 PMS2P1A4D2B8 440 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 TBC1D3FA6NER0 549 aaPredicted RBP13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 C10orf142B7Z368 130 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 TBC1D3LB9A6J9 549 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 DLDP09622 509 aaKnown RBP13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 TBC1D3HP0C7X1 549 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 POU3F2P20265 443 aaPredicted RBP13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 TGM2P21980 687 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 CORO1AP31146 461 aaKnown RBP13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 TNNC1P63316 161 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 STAT4Q14765 748 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 WDR72Q3MJ13 1102 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 TBC1D3GQ6DHY5 549 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 TBC1D3CQ6IPX1 549 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 C14orf80Q86SX3 495 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 TADA2BQ86TJ2 420 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 TBC1D3Q8IZP1 549 aaPredicted RBP13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 OR14C36Q8NHC7 312 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 IFI44Q8TCB0 444 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 SNX21Q969T3 373 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 ZSCAN31Q96LW9 406 aaPredicted RBP13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 PHF12Q96QT6 1004 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 ADNPQ9H2P0 1102 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 AGO1Q9UL18 857 aaKnown RBP13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 SCML2Q9UQR0 700 aa13.15□□□□□ -0.3
AC004540.1-204ENST00000449537 TDRD6O60522 2096 aaKnown RBP13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 A0A1W2PQH9 124 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 MID1O15344 667 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 NOBOXO60393 691 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 CST3P01034 146 aaPredicted RBP13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 HMBSP08397 361 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 ITGA2BP08514 1039 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 GARTP22102 1010 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 HLA-FP30511 346 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 SLC8A1P32418 973 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 KCNA1Q09470 495 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 SRSF6Q13247 344 aaKnown RBP13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 MORC3Q14149 939 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 CLCA4Q14CN2 919 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 SURF1Q15526 300 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 TGIF1Q15583 401 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 CST6Q15828 149 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 RBM44Q6ZP01 1051 aaKnown RBP13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 SND1Q7KZF4 910 aaKnown RBP eCLIP13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 ADIPOR2Q86V24 386 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 DENND1CQ8IV53 801 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 CPXM2Q8N436 756 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 ZMIZ2Q8NF64 920 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 KLHDC7BQ96G42 594 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 ACCSQ96QU6 501 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 SMOQ99835 787 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 MTG2Q9H4K7 406 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 PCIF1Q9H4Z3 704 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 NMUR1Q9HB89 426 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 KRT82Q9NSB4 513 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 ANAPC2Q9UJX6 822 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 LIMCH1Q9UPQ0 1083 aa13.14□□□□□ -0.31
AC004540.1-204ENST00000449537 NEMP2A6NFY4 417 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 LATO43561 262 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 BEST1O76090 585 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 GIMD1P0DJR0 217 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 GOT1P17174 413 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 SLC5A2P31639 672 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 MAP3K7CLP57077 242 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 EHHADHQ08426 723 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 MCM6Q14566 821 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 MPPE1Q53F39 396 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 MBLAC2Q68D91 279 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 TRAPPC11Q7Z392 1133 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 MMAAQ8IVH4 418 aaKnown RBP13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 HSCBQ8IWL3 235 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 SYCP3Q8IZU3 236 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 FUKQ8N0W3 1084 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 AHI1Q8N157 1196 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 ZNF276Q8N554 614 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 TPCN2Q8NHX9 752 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 SPATA20Q8TB22 786 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 ARRDC3Q96B67 414 aa13.13□□□□□ -0.31
AC004540.1-204ENST00000449537 CALML4Q96GE6 196 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms