RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 E9PAM4 449 aa15.11■□□□□ 0.01
TNF-208ENST00000449264 F5H5T6 163 aa15.11■□□□□ 0.01
TNF-208ENST00000449264 TRDMT1O14717 391 aaKnown RBP15.11■□□□□ 0.01
TNF-208ENST00000449264 CST8O60676 142 aa15.11■□□□□ 0.01
TNF-208ENST00000449264 TACR2P21452 398 aa15.11■□□□□ 0.01
TNF-208ENST00000449264 EPHB2P29323 1055 aa15.11■□□□□ 0.01
TNF-208ENST00000449264 SLC6A4P31645 630 aa15.11■□□□□ 0.01
TNF-208ENST00000449264 GBP2P32456 591 aaPredicted RBP15.11■□□□□ 0.01
TNF-208ENST00000449264 PTPN7P35236 360 aa15.11■□□□□ 0.01
TNF-208ENST00000449264 VCPP55072 806 aaKnown RBP15.11■□□□□ 0.01
TNF-208ENST00000449264 CKAP4Q07065 602 aaKnown RBP15.11■□□□□ 0.01
TNF-208ENST00000449264 MTA1Q13330 715 aa15.11■□□□□ 0.01
TNF-208ENST00000449264 TUBB2AQ13885 445 aa15.11■□□□□ 0.01
TNF-208ENST00000449264 TAZQ16635 292 aa15.11■□□□□ 0.01
TNF-208ENST00000449264 FAM133BQ5BKY9 247 aaKnown RBP15.11■□□□□ 0.01
TNF-208ENST00000449264 RFWD3Q6PCD5 774 aa15.11■□□□□ 0.01
TNF-208ENST00000449264 ST13P5Q8NFI4 369 aaPredicted RBP15.11■□□□□ 0.01
TNF-208ENST00000449264 PCDH19Q8TAB3 1148 aa15.11■□□□□ 0.01
TNF-208ENST00000449264 RIN3Q8TB24 985 aa15.11■□□□□ 0.01
TNF-208ENST00000449264 TBC1D31Q96DN5 1066 aa15.11■□□□□ 0.01
TNF-208ENST00000449264 RNF157Q96PX1 679 aa15.11■□□□□ 0.01
TNF-208ENST00000449264 NAP1L3Q99457 506 aaPredicted RBP15.11■□□□□ 0.01
TNF-208ENST00000449264 TUBB2BQ9BVA1 445 aa15.11■□□□□ 0.01
TNF-208ENST00000449264 AP1M1Q9BXS5 423 aa15.11■□□□□ 0.01
TNF-208ENST00000449264 ARHGEF4Q9NR80 690 aa15.11■□□□□ 0.01
TNF-208ENST00000449264 RCOR3Q9P2K3 495 aaPredicted RBP15.11■□□□□ 0.01
TNF-208ENST00000449264 USP15Q9Y4E8 981 aaPredicted RBP15.11■□□□□ 0.01
TNF-208ENST00000449264 TJP3O95049 919 aa15.1■□□□□ 0.01
TNF-208ENST00000449264 AMPD1P23109 780 aa15.1■□□□□ 0.01
TNF-208ENST00000449264 SP100P23497 879 aaPredicted RBP15.1■□□□□ 0.01
TNF-208ENST00000449264 MLLT6P55198 1093 aaPredicted RBP15.1■□□□□ 0.01
TNF-208ENST00000449264 ZNF77Q15935 545 aa15.1■□□□□ 0.01
TNF-208ENST00000449264 FAM78AQ5JUQ0 283 aa15.1■□□□□ 0.01
TNF-208ENST00000449264 FBXL22Q6P050 247 aa15.1■□□□□ 0.01
TNF-208ENST00000449264 LRRC31Q6UY01 552 aa15.1■□□□□ 0.01
TNF-208ENST00000449264 Q6ZNB5 142 aa15.1■□□□□ 0.01
TNF-208ENST00000449264 VSIG1Q86XK7 387 aa15.1■□□□□ 0.01
TNF-208ENST00000449264 BBS7Q8IWZ6 715 aa15.1■□□□□ 0.01
TNF-208ENST00000449264 LGI2Q8N0V4 545 aa15.1■□□□□ 0.01
TNF-208ENST00000449264 FAF2Q96CS3 445 aa15.1■□□□□ 0.01
TNF-208ENST00000449264 C1orf74Q96LT6 269 aa15.1■□□□□ 0.01
TNF-208ENST00000449264 RPRD1AQ96P16 312 aaPredicted RBP15.1■□□□□ 0.01
TNF-208ENST00000449264 MYADMQ96S97 322 aa15.1■□□□□ 0.01
TNF-208ENST00000449264 PRMT1Q99873 361 aaKnown RBP15.1■□□□□ 0.01
TNF-208ENST00000449264 UBE2ZQ9H832 354 aaPredicted RBP15.1■□□□□ 0.01
TNF-208ENST00000449264 GDE1Q9NZC3 331 aa15.1■□□□□ 0.01
TNF-208ENST00000449264 RNF14Q9UBS8 474 aa15.1■□□□□ 0.01
TNF-208ENST00000449264 CDH7Q9ULB5 785 aa15.1■□□□□ 0.01
TNF-208ENST00000449264 TTC7AQ9ULT0 858 aaPredicted RBP15.1■□□□□ 0.01
TNF-208ENST00000449264 MFHAS1Q9Y4C4 1052 aa15.1■□□□□ 0.01
TNF-208ENST00000449264 ZNF487B1APH4 448 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 APOL1O14791 398 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 GREM1O60565 184 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 VIPR2P41587 438 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 IRAK1P51617 712 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 ZNF135P52742 658 aaPredicted RBP15.09■□□□□ 0.01
TNF-208ENST00000449264 USP4Q13107 963 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 DPYSQ14117 519 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 TFDP2Q14188 446 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 ADGRF1Q5T601 910 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 MANEALQ5VSG8 457 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 CIR1Q86X95 450 aaPredicted RBP15.09■□□□□ 0.01
TNF-208ENST00000449264 PQLC3Q8N755 202 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 SMARCD2Q92925 531 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 IGSF8Q969P0 613 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 AZIN2Q96A70 460 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 MYEOVQ96EZ4 313 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 ASB16Q96NS5 453 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 FAM118BQ9BPY3 351 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 CARD6Q9BX69 1037 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 L2HGDHQ9H9P8 463 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 ETNK2Q9NVF9 386 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 MPP6Q9NZW5 540 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 STIM2Q9P246 746 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 NEU3Q9UQ49 428 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 KRIT1O00522 736 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 TSPAN3O60637 253 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 LATS1O95835 1130 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 ERCC2P18074 760 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 NRG1Q02297 640 aaPredicted RBP15.09■□□□□ 0.01
TNF-208ENST00000449264 C2orf54Q08AI8 447 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 KLF1Q13351 362 aaPredicted RBP15.09■□□□□ 0.01
TNF-208ENST00000449264 C1orf228Q6PIY5 440 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 BBS12Q6ZW61 710 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 HTR3DQ70Z44 454 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 TFAP2DQ7Z6R9 452 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 CELF5Q8N6W0 485 aaKnown RBP15.09■□□□□ 0.01
TNF-208ENST00000449264 PRICKLE1Q96MT3 831 aaPredicted RBP15.09■□□□□ 0.01
TNF-208ENST00000449264 NECTIN4Q96NY8 510 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 DDX50Q9BQ39 737 aaKnown RBP15.09■□□□□ 0.01
TNF-208ENST00000449264 KIF9Q9HAQ2 790 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 SAE1Q9UBE0 346 aaPredicted RBP15.09■□□□□ 0.01
TNF-208ENST00000449264 ZNF510Q9Y2H8 683 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 UNC80Q8N2C7 3258 aa15.09■□□□□ 0.01
TNF-208ENST00000449264 MYOFQ9NZM1 2061 aa15.08■□□□□ 0.01
TNF-208ENST00000449264 GOLGA6L10A0A0M3HER8 536 aa15.08■□□□□ 0
TNF-208ENST00000449264 E2F8A0AVK6 867 aa15.08■□□□□ 0
TNF-208ENST00000449264 MAP3K6O95382 1288 aa15.08■□□□□ 0
TNF-208ENST00000449264 PECAM1P16284 738 aaPredicted RBP15.08■□□□□ 0
TNF-208ENST00000449264 SGSHP51688 502 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms