RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 ZFYVE19Q96K21 471 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 RPRD1AQ96P16 312 aaPredicted RBP17.99■□□□□ 0.47
SGCE-206ENST00000445866 PSMB7Q99436 277 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 EPAS1Q99814 870 aa17.99■□□□□ 0.47
SGCE-206ENST00000445866 TRMT61BQ9BVS5 477 aaKnown RBP17.99■□□□□ 0.47
SGCE-206ENST00000445866 MTCL1Q9Y4B5 1905 aaKnown RBP17.98■□□□□ 0.47
SGCE-206ENST00000445866 MYH10P35580 1976 aa17.98■□□□□ 0.47
SGCE-206ENST00000445866 E9PAM4 449 aa17.98■□□□□ 0.47
SGCE-206ENST00000445866 KCNK3O14649 394 aa17.98■□□□□ 0.47
SGCE-206ENST00000445866 LRIG2O94898 1065 aa17.98■□□□□ 0.47
SGCE-206ENST00000445866 ATP1A1P05023 1023 aaKnown RBP17.98■□□□□ 0.47
SGCE-206ENST00000445866 ARL4AP40617 200 aa17.98■□□□□ 0.47
SGCE-206ENST00000445866 CETN2P41208 172 aa17.98■□□□□ 0.47
SGCE-206ENST00000445866 ARSEP51690 589 aa17.98■□□□□ 0.47
SGCE-206ENST00000445866 VCPP55072 806 aaKnown RBP17.98■□□□□ 0.47
SGCE-206ENST00000445866 TPGS1Q6ZTW0 290 aa17.98■□□□□ 0.47
SGCE-206ENST00000445866 CCDC50Q8IVM0 306 aa17.98■□□□□ 0.47
SGCE-206ENST00000445866 CFAP52Q8N1V2 620 aa17.98■□□□□ 0.47
SGCE-206ENST00000445866 DEPDC1BQ8WUY9 529 aa17.98■□□□□ 0.47
SGCE-206ENST00000445866 NXPE3Q969Y0 559 aa17.98■□□□□ 0.47
SGCE-206ENST00000445866 OTUB2Q96DC9 234 aa17.98■□□□□ 0.47
SGCE-206ENST00000445866 NAPGQ99747 312 aaPredicted RBP17.98■□□□□ 0.47
SGCE-206ENST00000445866 MAK16Q9BXY0 300 aaKnown RBP17.98■□□□□ 0.47
SGCE-206ENST00000445866 KCNK12Q9HB15 430 aa17.98■□□□□ 0.47
SGCE-206ENST00000445866 CWC15Q9P013 229 aaKnown RBP17.98■□□□□ 0.47
SGCE-206ENST00000445866 ATG2AQ2TAZ0 1938 aa17.98■□□□□ 0.47
SGCE-206ENST00000445866 H3BRJ5 948 aa17.97■□□□□ 0.47
SGCE-206ENST00000445866 EEF2KO00418 725 aaKnown RBP17.97■□□□□ 0.47
SGCE-206ENST00000445866 TUBB4AP04350 444 aa17.97■□□□□ 0.47
SGCE-206ENST00000445866 PYGMP11217 842 aa17.97■□□□□ 0.47
SGCE-206ENST00000445866 GOT1P17174 413 aa17.97■□□□□ 0.47
SGCE-206ENST00000445866 EPHB2P29323 1055 aa17.97■□□□□ 0.47
SGCE-206ENST00000445866 GDI1P31150 447 aa17.97■□□□□ 0.47
SGCE-206ENST00000445866 NRG1Q02297 640 aaPredicted RBP17.97■□□□□ 0.47
SGCE-206ENST00000445866 FCHO2Q0JRZ9 810 aa17.97■□□□□ 0.47
SGCE-206ENST00000445866 MMRN1Q13201 1228 aa17.97■□□□□ 0.47
SGCE-206ENST00000445866 ZNF211Q13398 564 aaPredicted RBP17.97■□□□□ 0.47
SGCE-206ENST00000445866 DPYSL3Q14195 570 aa17.97■□□□□ 0.47
SGCE-206ENST00000445866 LLGL1Q15334 1064 aa17.97■□□□□ 0.47
SGCE-206ENST00000445866 TRIM68Q6AZZ1 485 aa17.97■□□□□ 0.47
SGCE-206ENST00000445866 MFSD7Q6UXD7 560 aa17.97■□□□□ 0.47
SGCE-206ENST00000445866 TMEM25Q86YD3 366 aa17.97■□□□□ 0.47
SGCE-206ENST00000445866 CPXM2Q8N436 756 aa17.97■□□□□ 0.47
SGCE-206ENST00000445866 BHMTQ93088 406 aa17.97■□□□□ 0.47
SGCE-206ENST00000445866 IGSF8Q969P0 613 aa17.97■□□□□ 0.47
SGCE-206ENST00000445866 MYEOVQ96EZ4 313 aa17.97■□□□□ 0.47
SGCE-206ENST00000445866 RBM41Q96IZ5 413 aaKnown RBP17.97■□□□□ 0.47
SGCE-206ENST00000445866 DRGXA6NNA5 263 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 CYBBP04839 570 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 IL4RP24394 825 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 CXCR5P32302 372 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 HCAR3P49019 387 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 ZNF135P52742 658 aaPredicted RBP17.96■□□□□ 0.47
SGCE-206ENST00000445866 TPI1P60174 286 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 RPS24P62847 133 aaKnown RBP17.96■□□□□ 0.47
SGCE-206ENST00000445866 SEMA3BQ13214 749 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 PDGFRLQ15198 375 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 RABGAP1LQ5R372 815 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 FAM217AQ8IXS0 508 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 FAM71BQ8TC56 605 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 DDI1Q8WTU0 396 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 ATXN2LQ8WWM7 1075 aaKnown RBP17.96■□□□□ 0.47
SGCE-206ENST00000445866 ZNF592Q92610 1267 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 IRF7Q92985 503 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 FAM83CQ9BQN1 747 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 EBF3Q9H4W6 596 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 SPHK2Q9NRA0 654 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 MPP6Q9NZW5 540 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 IGSF9Q9P2J2 1179 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 PATJQ8NI35 1801 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 C3orf70A6NLC5 250 aaPredicted RBP17.96■□□□□ 0.47
SGCE-206ENST00000445866 LOC730098B7Z3J9 87 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 KIF2AO00139 706 aaPredicted RBP17.96■□□□□ 0.47
SGCE-206ENST00000445866 CHADO15335 359 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 ARSAP15289 507 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 EML3Q32P44 896 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 MPPE1Q53F39 396 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 RHBDF2Q6PJF5 856 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 SPOCD1Q6ZMY3 1216 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 RFX8Q6ZV50 586 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 ADHFE1Q8IWW8 467 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 ZNF683Q8IZ20 524 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 SLC44A3Q8N4M1 653 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 TBC1D31Q96DN5 1066 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 ASIC4Q96FT7 647 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 CSPG4P5Q96PW8 444 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 HEMGNQ9BXL5 484 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 PPARGC1AQ9UBK2 798 aaKnown RBP17.96■□□□□ 0.47
SGCE-206ENST00000445866 PRKAG3Q9UGI9 489 aa17.96■□□□□ 0.47
SGCE-206ENST00000445866 TBL1XO60907 577 aa17.95■□□□□ 0.46
SGCE-206ENST00000445866 ASGR2P07307 311 aa17.95■□□□□ 0.46
SGCE-206ENST00000445866 AMPD1P23109 780 aa17.95■□□□□ 0.46
SGCE-206ENST00000445866 HTR7P34969 479 aa17.95■□□□□ 0.46
SGCE-206ENST00000445866 TNK2Q07912 1038 aa17.95■□□□□ 0.46
SGCE-206ENST00000445866 NR1H3Q13133 447 aa17.95■□□□□ 0.46
SGCE-206ENST00000445866 DHCR24Q15392 516 aa17.95■□□□□ 0.46
SGCE-206ENST00000445866 ANO4Q32M45 955 aa17.95■□□□□ 0.46
SGCE-206ENST00000445866 ANKRD20A8PQ5CZ79 823 aa17.95■□□□□ 0.46
SGCE-206ENST00000445866 LY6G5CQ5SRR4 150 aa17.95■□□□□ 0.46
SGCE-206ENST00000445866 MANEALQ5VSG8 457 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms