RNA–Protein interactions for RNA: ENST00000445503.5

MSH6-204, Transcript of mutS homolog 6, humanhuman

TSL 1 (best)

Gene MSH6, Length 4,158 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-204ENST00000445503 GRK2P25098 689 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 GP5P40197 560 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 ABCE1P61221 599 aaKnown RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 ADIGQ0VDE8 80 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 WASHC5Q12768 1159 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 TSHZ1Q6ZSZ6 1077 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 ZSCAN18Q8TBC5 510 aaPredicted RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 CELF6Q96J87 481 aaKnown RBP12.19□□□□□ -0.46
MSH6-204ENST00000445503 GPR20Q99678 358 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 ASB7Q9H672 318 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 TCF7L2Q9NQB0 619 aa12.19□□□□□ -0.46
MSH6-204ENST00000445503 MAGEC1O60732 1142 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 MCF2P10911 925 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 DLG2Q15700 870 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 CELF3Q5SZQ8 465 aaKnown RBP12.18□□□□□ -0.46
MSH6-204ENST00000445503 ARMCX2Q7L311 632 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 MOCOSQ96EN8 888 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 CYP4F12Q9HCS2 524 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 KIAA1257Q9ULG3 409 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 ADGRA2Q96PE1 1338 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 A0A0A0MRY4 1105 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 PEX2P28328 305 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 ADORA2AP29274 412 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 EPHA3P29320 983 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 CDC16Q13042 620 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 DYNC1I2Q13409 638 aaKnown RBP12.18□□□□□ -0.46
MSH6-204ENST00000445503 LBRQ14739 615 aaKnown RBP12.18□□□□□ -0.46
MSH6-204ENST00000445503 RPS6KA2Q15349 733 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 SLC10A6Q3KNW5 377 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 PTAR1Q7Z6K3 402 aaPredicted RBP12.18□□□□□ -0.46
MSH6-204ENST00000445503 TTC39CQ8N584 583 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 CCDC185Q8N715 623 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 APPL2Q8NEU8 664 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 TMEM174Q8WUU8 243 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 C18orf25Q96B23 403 aaPredicted RBP12.18□□□□□ -0.46
MSH6-204ENST00000445503 SPATA13Q96N96 652 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 CSPG4P5Q96PW8 444 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 USP29Q9HBJ7 922 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 TMPRSS4Q9NRS4 437 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 CAPN8A6NHC0 703 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 JCHAINP01591 159 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 RABGGTBP53611 331 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 ROR2Q01974 943 aaKnown RBP12.18□□□□□ -0.46
MSH6-204ENST00000445503 ENPEPQ07075 957 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 PQLC3Q8N755 202 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 IPMKQ8NFU5 416 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 VPS33BQ9H267 617 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 DPEP3Q9H4B8 488 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 COPS7BQ9H9Q2 264 aaPredicted RBP12.18□□□□□ -0.46
MSH6-204ENST00000445503 S100A14Q9HCY8 104 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 VANGL2Q9ULK5 521 aa12.18□□□□□ -0.46
MSH6-204ENST00000445503 RUVBL2Q9Y230 463 aaKnown RBP12.18□□□□□ -0.46
MSH6-204ENST00000445503 A6NHS1 94 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 CRCPO75575 148 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 SORBS2O94875 1100 aaKnown RBP12.17□□□□□ -0.46
MSH6-204ENST00000445503 ETV4P43268 484 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 GABRB2P47870 512 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 NAGLUP54802 743 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 PRAMEP78395 509 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 MPP3Q13368 585 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 OLFML2BQ68BL8 750 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 LCLAT1Q6UWP7 414 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.17□□□□□ -0.46
MSH6-204ENST00000445503 TRPM4Q8TD43 1214 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 EME1Q96AY2 570 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 P2RY11Q96G91 374 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 HIC2Q96JB3 615 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 OSMRQ99650 979 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 SUDS3Q9H7L9 328 aaPredicted RBP12.17□□□□□ -0.46
MSH6-204ENST00000445503 DNAJC6O75061 913 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 MOCS2O96007 188 aaPredicted RBP12.17□□□□□ -0.46
MSH6-204ENST00000445503 NCAM1P13591 858 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 PGAM1P18669 254 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 ACTR3P61158 418 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 MRPS5P82675 430 aaKnown RBP12.17□□□□□ -0.46
MSH6-204ENST00000445503 GRIK3Q13003 919 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 TMED1Q13445 227 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 PDE1CQ14123 709 aaPredicted RBP12.17□□□□□ -0.46
MSH6-204ENST00000445503 VGLL4Q14135 290 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 CTC1Q2NKJ3 1217 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 TWF2Q6IBS0 349 aaKnown RBP12.17□□□□□ -0.46
MSH6-204ENST00000445503 MTHFD1LQ6UB35 978 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 C4orf22Q6V702 233 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 LRRC40Q9H9A6 602 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 DDX18Q9NVP1 670 aaKnown RBP12.17□□□□□ -0.46
MSH6-204ENST00000445503 ITGA11Q9UKX5 1188 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 CLEC11AQ9Y240 323 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 FNDC3AQ9Y2H6 1198 aaKnown RBP12.17□□□□□ -0.46
MSH6-204ENST00000445503 TIMM13Q9Y5L4 95 aaPredicted RBP12.17□□□□□ -0.46
MSH6-204ENST00000445503 PSAT1Q9Y617 370 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 XPO1O14980 1071 aaKnown RBP12.17□□□□□ -0.46
MSH6-204ENST00000445503 PEX1O43933 1283 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 PLIN3O60664 434 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 COX4I1P13073 169 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 RPS12P25398 132 aaKnown RBP12.17□□□□□ -0.46
MSH6-204ENST00000445503 CNTFP26441 200 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 CASP2P42575 452 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 MOB2Q70IA6 237 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 ARCQ7LC44 396 aa12.17□□□□□ -0.46
MSH6-204ENST00000445503 AFAP1L2Q8N4X5 818 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms