RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 CEP41Q9BYV8 373 aa14.09□□□□□ -0.15
RBM39-216ENST00000444878 HMX1Q9NP08 348 aaPredicted RBP14.09□□□□□ -0.15
RBM39-216ENST00000444878 OR12D3Q9UGF7 316 aa14.09□□□□□ -0.15
RBM39-216ENST00000444878 TTLL3Q9Y4R7 772 aa14.09□□□□□ -0.15
RBM39-216ENST00000444878 RAD54BQ9Y620 910 aa14.09□□□□□ -0.15
RBM39-216ENST00000444878 NCAM2O15394 837 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 ZNF189O75820 626 aaPredicted RBP14.08□□□□□ -0.16
RBM39-216ENST00000444878 ZWINTO95229 277 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 APOEP02649 317 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 MT-ND3P03897 115 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 FOXN2P32314 431 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 OR1G1P47890 313 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 DSC1Q08554 894 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 LHX8Q68G74 356 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 UNC5AQ6ZN44 842 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 SLC26A11Q86WA9 606 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 TP53INP2Q8IXH6 220 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 PPM1NQ8N819 430 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 PDCD7Q8N8D1 485 aaKnown RBP14.08□□□□□ -0.16
RBM39-216ENST00000444878 DQX1Q8TE96 717 aaKnown RBP14.08□□□□□ -0.16
RBM39-216ENST00000444878 FAM193BQ96PV7 902 aaPredicted RBP14.08□□□□□ -0.16
RBM39-216ENST00000444878 CFHR5Q9BXR6 569 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 CREBZFQ9NS37 354 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 KIAA1522Q9P206 1035 aaPredicted RBP14.08□□□□□ -0.16
RBM39-216ENST00000444878 KANSL3Q9P2N6 904 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 VWA8A3KMH1 1905 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 GOLGA8RI6L899 631 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 TAC1P20366 129 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 PRKCHP24723 683 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 EPHB2P29323 1055 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 SLC5A3P53794 718 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 FAM189BP81408 668 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 WASHC5Q12768 1159 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 SLC1A5Q15758 541 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 PARP6Q2NL67 630 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 PID1Q7Z2X4 250 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 ZNF567Q8N184 647 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 MPP5Q8N3R9 675 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 GSDMBQ8TAX9 411 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 PPM1EQ8WY54 764 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 KLF6Q99612 283 aaPredicted RBP14.08□□□□□ -0.16
RBM39-216ENST00000444878 FTHL17Q9BXU8 183 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 EIF2B3Q9NR50 452 aaKnown RBP14.08□□□□□ -0.16
RBM39-216ENST00000444878 TBC1D13Q9NVG8 400 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 PRG3Q9Y2Y8 225 aaPredicted RBP14.08□□□□□ -0.16
RBM39-216ENST00000444878 USP15Q9Y4E8 981 aaPredicted RBP14.08□□□□□ -0.16
RBM39-216ENST00000444878 SNX10Q9Y5X0 201 aa14.08□□□□□ -0.16
RBM39-216ENST00000444878 COL4A4P53420 1690 aaPredicted RBP14.07□□□□□ -0.16
RBM39-216ENST00000444878 KCNK1O00180 336 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 SUN1O94901 812 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 GNRH1P01148 92 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 OR4Q2P0C623 313 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 MLNP12872 115 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 PSMB4P28070 264 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 SERPINB6P35237 376 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 FAAP100Q0VG06 881 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 SLC39A12Q504Y0 691 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 BTBD8Q5XKL5 378 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 CASC4Q6P4E1 433 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 LVRNQ6Q4G3 990 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 BEND5Q7L4P6 421 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 COLGALT2Q8IYK4 626 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 MICALL1Q8N3F8 863 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 SLC43A3Q8NBI5 491 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 PITPNM3Q9BZ71 974 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 RASSF4Q9H2L5 321 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 ABCC13Q9NSE7 274 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 KLHL8Q9P2G9 620 aaPredicted RBP14.07□□□□□ -0.16
RBM39-216ENST00000444878 TET1Q8NFU7 2136 aa14.07□□□□□ -0.16
RBM39-216ENST00000444878 CCT8L1PA6NM43 557 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 TMEM189-UBE2V1I3L0A0 370 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 ARVCFO00192 962 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 LRIG2O94898 1065 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 C1QAP02745 245 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 MX2P20592 715 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 PPIDQ08752 370 aaKnown RBP14.06□□□□□ -0.16
RBM39-216ENST00000444878 PDK4Q16654 411 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 LGSNQ5TDP6 509 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 TTC39BQ5VTQ0 682 aaPredicted RBP14.06□□□□□ -0.16
RBM39-216ENST00000444878 LRRC8BQ6P9F7 803 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 SCN4BQ8IWT1 228 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 NPWQ8N729 165 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 BANPQ8N9N5 519 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 TCP10LQ8TDR4 215 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 LRRC8CQ8TDW0 803 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 CCT6BQ92526 530 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 PLAC1Q9HBJ0 212 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 ABI2Q9NYB9 513 aaPredicted RBP14.06□□□□□ -0.16
RBM39-216ENST00000444878 IGSF9Q9P2J2 1179 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 PCDHA11Q9Y5I1 949 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 SDR42E2A6NKP2 422 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 CXorf49A8MYA2 514 aaPredicted RBP14.06□□□□□ -0.16
RBM39-216ENST00000444878 TM9SF1O15321 606 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 TADA2AO75478 443 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 KRT37O76014 449 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 OAZ2O95190 189 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 OAS1P00973 400 aaKnown RBP14.06□□□□□ -0.16
RBM39-216ENST00000444878 MTFR1Q15390 333 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 FAM47EQ6ZV65 393 aa14.06□□□□□ -0.16
RBM39-216ENST00000444878 LRRC8DQ7L1W4 858 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms