RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 GPM6BQ13491 265 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 PABPC1LQ4VXU2 614 aaKnown RBP9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 NUGGCQ68CJ6 796 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 KLHDC10Q6PID8 442 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 B4GALNT4Q76KP1 1039 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 PRUNE1Q86TP1 453 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 CDKL3Q8IVW4 592 aaPredicted RBP9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 ZNF276Q8N554 614 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 CCDC33Q8N5R6 958 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 CERS4Q9HA82 394 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 PCDH9Q9HC56 1237 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 YBX2Q9Y2T7 364 aaKnown RBP9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 NEU2Q9Y3R4 380 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 HBS1LQ9Y450 684 aaKnown RBP9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 HS3ST4Q9Y661 456 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 C2orf78A6NCI8 922 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 KCNN4O15554 427 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 IGLV3-27P01718 113 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 ZSCAN5DPP0CG00 497 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 ETS1P14921 441 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 STIP1P31948 543 aaKnown RBP9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 HTR7P34969 479 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 SERPINB6P35237 376 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 ACTN2P35609 894 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 HARS2P49590 506 aaKnown RBP9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 GDF10P55107 478 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 SLC10A2Q12908 348 aaPredicted RBP9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 GPS1Q13098 491 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 XRCC4Q13426 336 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 CAMK1Q14012 370 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 P3H1Q32P28 736 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 PPM1LQ5SGD2 360 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 PIK3R6Q5UE93 754 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 UNC45BQ8IWX7 931 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 GLIS1Q8NBF1 620 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 TBC1D31Q96DN5 1066 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 C1orf74Q96LT6 269 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 FMO2Q99518 471 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 CATSPERBQ9H7T0 1116 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 TRPC7Q9HCX4 862 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 ZNF334Q9HCZ1 680 aaPredicted RBP9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 GRHL1Q9NZI5 618 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 WHRNQ9P202 907 aa9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 TNRC18O15417 2968 aaPredicted RBP9.8□□□□□ -0.84
SMPD4P1-203ENST00000443839 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 CFAP69A5D8W1 941 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 E9PAM4 449 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 H3BNC9 293 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 CCL16O15467 120 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 FGF10O15520 208 aaPredicted RBP9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 FAM153BP0C7A2 387 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 ITIH2P19823 946 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 GABRR2P28476 465 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 MLLT6P55198 1093 aaPredicted RBP9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 COG7P83436 770 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 MTA1Q13330 715 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 PAFAH1B3Q15102 231 aaKnown RBP9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 PDK1Q15118 436 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 FAM153CQ494X1 144 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 SLC45A4Q5BKX6 768 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 PPP2R2DQ66LE6 453 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 HEATR6Q6AI08 1181 aaKnown RBP9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 PDE12Q6L8Q7 609 aaKnown RBP9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 LRRC31Q6UY01 552 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 HDXQ7Z353 690 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 TMEM150AQ86TG1 271 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 BBOF1Q8ND07 529 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 CCNYQ8ND76 341 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 FBXO25Q8TCJ0 367 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 LRRN4Q8WUT4 740 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 TFB1MQ8WVM0 346 aaKnown RBP9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 QKIQ96PU8 341 aaKnown RBP eCLIP9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 GCNAQ96QF7 691 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 FERMT1Q9BQL6 677 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 PBX4Q9BYU1 374 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 NEUROG2Q9H2A3 272 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 MAN1C1Q9NR34 630 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 ASAH2Q9NR71 780 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 ZDHHC18Q9NUE0 388 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 RYDENQ9NUL5 291 aaKnown RBP9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 MTRF1LQ9UGC7 380 aaKnown RBP9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 FAM153AQ9UHL3 310 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 MSRAQ9UJ68 235 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 VANGL2Q9ULK5 521 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 NUP205Q92621 2012 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 ANAPC1Q9H1A4 1944 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 MTCL1Q9Y4B5 1905 aaKnown RBP9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 BCLAF3A2AJT9 711 aaKnown RBP9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 HACD1B0YJ81 288 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 PPP1R12AO14974 1030 aaPredicted RBP9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 OAS1P00973 400 aaKnown RBP9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 F11P03951 625 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 RBL1P28749 1068 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 KCNQ1P51787 676 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 NRG1Q02297 640 aaPredicted RBP9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 AP1B1Q10567 949 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 AUHQ13825 339 aaKnown RBP9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 RAB30Q15771 203 aa9.79□□□□□ -0.84
SMPD4P1-203ENST00000443839 MS4A13Q5J8X5 152 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms