RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 GOLGA8SH3BPF8 625 aa21.82■■□□□ 1.08
CDKN3-204ENST00000442975 EPHX1P07099 455 aa21.82■■□□□ 1.08
CDKN3-204ENST00000442975 ABCB4P21439 1286 aa21.82■■□□□ 1.08
CDKN3-204ENST00000442975 TACR2P21452 398 aa21.82■■□□□ 1.08
CDKN3-204ENST00000442975 CCR1P32246 355 aa21.82■■□□□ 1.08
CDKN3-204ENST00000442975 CDH5P33151 784 aaPredicted RBP21.82■■□□□ 1.08
CDKN3-204ENST00000442975 SOX5P35711 763 aa21.82■■□□□ 1.08
CDKN3-204ENST00000442975 ARHGAP8P85298 464 aa21.82■■□□□ 1.08
CDKN3-204ENST00000442975 E2F5Q15329 346 aa21.82■■□□□ 1.08
CDKN3-204ENST00000442975 FUT11Q495W5 492 aa21.82■■□□□ 1.08
CDKN3-204ENST00000442975 C2CD6Q53TS8 623 aa21.82■■□□□ 1.08
CDKN3-204ENST00000442975 LPCAT2Q7L5N7 544 aa21.82■■□□□ 1.08
CDKN3-204ENST00000442975 DDX51Q8N8A6 666 aaKnown RBP eCLIP21.82■■□□□ 1.08
CDKN3-204ENST00000442975 ZNF557Q8N988 423 aaPredicted RBP21.82■■□□□ 1.08
CDKN3-204ENST00000442975 CPA5Q8WXQ8 436 aa21.82■■□□□ 1.08
CDKN3-204ENST00000442975 C18orf8Q96DM3 657 aa21.82■■□□□ 1.08
CDKN3-204ENST00000442975 IRX2Q9BZI1 471 aaPredicted RBP21.82■■□□□ 1.08
CDKN3-204ENST00000442975 HSD3B7Q9H2F3 369 aa21.82■■□□□ 1.08
CDKN3-204ENST00000442975 CD248Q9HCU0 757 aa21.82■■□□□ 1.08
CDKN3-204ENST00000442975 MBD1Q9UIS9 605 aaPredicted RBP21.82■■□□□ 1.08
CDKN3-204ENST00000442975 CYP8B1Q9UNU6 501 aa21.82■■□□□ 1.08
CDKN3-204ENST00000442975 CEP250Q9BV73 2442 aa21.82■■□□□ 1.08
CDKN3-204ENST00000442975 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa21.81■■□□□ 1.08
CDKN3-204ENST00000442975 F5H5T6 163 aa21.81■■□□□ 1.08
CDKN3-204ENST00000442975 TIMM44O43615 452 aa21.81■■□□□ 1.08
CDKN3-204ENST00000442975 SLC2A3P11169 496 aa21.81■■□□□ 1.08
CDKN3-204ENST00000442975 STAT1P42224 750 aa21.81■■□□□ 1.08
CDKN3-204ENST00000442975 JAM2P57087 298 aa21.81■■□□□ 1.08
CDKN3-204ENST00000442975 NOMO3P69849 1222 aa21.81■■□□□ 1.08
CDKN3-204ENST00000442975 MBLAC2Q68D91 279 aa21.81■■□□□ 1.08
CDKN3-204ENST00000442975 TCEAL6Q6IPX3 200 aa21.81■■□□□ 1.08
CDKN3-204ENST00000442975 ADIPOR2Q86V24 386 aa21.81■■□□□ 1.08
CDKN3-204ENST00000442975 TMEFF1Q8IYR6 380 aa21.81■■□□□ 1.08
CDKN3-204ENST00000442975 TCEAL3Q969E4 200 aa21.81■■□□□ 1.08
CDKN3-204ENST00000442975 MRGPRX1Q96LB2 322 aa21.81■■□□□ 1.08
CDKN3-204ENST00000442975 VPS45Q9NRW7 570 aa21.81■■□□□ 1.08
CDKN3-204ENST00000442975 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.81■■□□□ 1.08
CDKN3-204ENST00000442975 NOCTQ9UK39 431 aaKnown RBP21.81■■□□□ 1.08
CDKN3-204ENST00000442975 PLA2G4CQ9UP65 541 aa21.81■■□□□ 1.08
CDKN3-204ENST00000442975 DAAM1Q9Y4D1 1078 aa21.81■■□□□ 1.08
CDKN3-204ENST00000442975 BCLAF3A2AJT9 711 aaKnown RBP21.8■■□□□ 1.08
CDKN3-204ENST00000442975 KCNU1A8MYU2 1149 aa21.8■■□□□ 1.08
CDKN3-204ENST00000442975 M0QYT0 321 aa21.8■■□□□ 1.08
CDKN3-204ENST00000442975 FOXD2O60548 495 aaPredicted RBP21.8■■□□□ 1.08
CDKN3-204ENST00000442975 HLA-EP13747 358 aa21.8■■□□□ 1.08
CDKN3-204ENST00000442975 MATKP42679 507 aa21.8■■□□□ 1.08
CDKN3-204ENST00000442975 SULT1E1P49888 294 aa21.8■■□□□ 1.08
CDKN3-204ENST00000442975 CDR2Q01850 454 aa21.8■■□□□ 1.08
CDKN3-204ENST00000442975 RPL6Q02878 288 aaKnown RBP21.8■■□□□ 1.08
CDKN3-204ENST00000442975 LMAN2Q12907 356 aa21.8■■□□□ 1.08
CDKN3-204ENST00000442975 RNF43Q68DV7 783 aa21.8■■□□□ 1.08
CDKN3-204ENST00000442975 CIR1Q86X95 450 aaPredicted RBP21.8■■□□□ 1.08
CDKN3-204ENST00000442975 ZNF677Q86XU0 584 aa21.8■■□□□ 1.08
CDKN3-204ENST00000442975 XYLT1Q86Y38 959 aa21.8■■□□□ 1.08
CDKN3-204ENST00000442975 ZNF366Q8N895 744 aa21.8■■□□□ 1.08
CDKN3-204ENST00000442975 ZNF397Q8NF99 534 aaPredicted RBP21.8■■□□□ 1.08
CDKN3-204ENST00000442975 CD93Q9NPY3 652 aa21.8■■□□□ 1.08
CDKN3-204ENST00000442975 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.8■■□□□ 1.08
CDKN3-204ENST00000442975 STAP1Q9ULZ2 295 aa21.8■■□□□ 1.08
CDKN3-204ENST00000442975 H0Y626 953 aa21.79■■□□□ 1.08
CDKN3-204ENST00000442975 GDF9O60383 454 aa21.79■■□□□ 1.08
CDKN3-204ENST00000442975 ZNF217O75362 1048 aa21.79■■□□□ 1.08
CDKN3-204ENST00000442975 LUC7L3O95232 432 aaKnown RBP21.79■■□□□ 1.08
CDKN3-204ENST00000442975 CAVIN2O95810 425 aa21.79■■□□□ 1.08
CDKN3-204ENST00000442975 ATP5BP06576 529 aaKnown RBP21.79■■□□□ 1.08
CDKN3-204ENST00000442975 POLR2EP19388 210 aaKnown RBP21.79■■□□□ 1.08
CDKN3-204ENST00000442975 NOS2P35228 1153 aa21.79■■□□□ 1.08
CDKN3-204ENST00000442975 GGCXP38435 758 aa21.79■■□□□ 1.08
CDKN3-204ENST00000442975 PTGER3P43115 390 aa21.79■■□□□ 1.08
CDKN3-204ENST00000442975 ENPP2Q13822 863 aa21.79■■□□□ 1.08
CDKN3-204ENST00000442975 PUM1Q14671 1186 aaKnown RBP eCLIP21.79■■□□□ 1.08
CDKN3-204ENST00000442975 PLA2G2CQ5R387 149 aa21.79■■□□□ 1.08
CDKN3-204ENST00000442975 OTUD1Q5VV17 481 aaPredicted RBP21.79■■□□□ 1.08
CDKN3-204ENST00000442975 MMS22LQ6ZRQ5 1243 aa21.79■■□□□ 1.08
CDKN3-204ENST00000442975 APTXQ7Z2E3 356 aaKnown RBP21.79■■□□□ 1.08
CDKN3-204ENST00000442975 DHX40Q8IX18 779 aaKnown RBP21.79■■□□□ 1.08
CDKN3-204ENST00000442975 DEFB119Q8N690 84 aa21.79■■□□□ 1.08
CDKN3-204ENST00000442975 NETO1Q8TDF5 533 aa21.79■■□□□ 1.08
CDKN3-204ENST00000442975 PIGKQ92643 395 aa21.79■■□□□ 1.08
CDKN3-204ENST00000442975 BPIFA3Q9BQP9 254 aa21.79■■□□□ 1.08
CDKN3-204ENST00000442975 PRDM16Q9HAZ2 1276 aa21.79■■□□□ 1.08
CDKN3-204ENST00000442975 DCHS1Q96JQ0 3298 aa21.78■■□□□ 1.08
CDKN3-204ENST00000442975 IGHV1OR15-9A0A0B4J2B8 117 aa21.78■■□□□ 1.08
CDKN3-204ENST00000442975 SMTNL1A8MU46 457 aa21.78■■□□□ 1.08
CDKN3-204ENST00000442975 DLDP09622 509 aaKnown RBP21.78■■□□□ 1.08
CDKN3-204ENST00000442975 ZNF806P0C7X5 589 aa21.78■■□□□ 1.08
CDKN3-204ENST00000442975 SDHBP21912 280 aa21.78■■□□□ 1.08
CDKN3-204ENST00000442975 GABRB2P47870 512 aa21.78■■□□□ 1.08
CDKN3-204ENST00000442975 FMO1Q01740 532 aa21.78■■□□□ 1.08
CDKN3-204ENST00000442975 EIF4EBP2Q13542 120 aaPredicted RBP21.78■■□□□ 1.08
CDKN3-204ENST00000442975 RABGAP1LQ5R372 815 aa21.78■■□□□ 1.08
CDKN3-204ENST00000442975 LYSMD4Q5XG99 296 aa21.78■■□□□ 1.08
CDKN3-204ENST00000442975 SLC36A4Q6YBV0 504 aa21.78■■□□□ 1.08
CDKN3-204ENST00000442975 DGLUCYQ7Z3D6 616 aa21.78■■□□□ 1.08
CDKN3-204ENST00000442975 FIBINQ8TAL6 211 aa21.78■■□□□ 1.08
CDKN3-204ENST00000442975 ERGIC2Q96RQ1 377 aa21.78■■□□□ 1.08
CDKN3-204ENST00000442975 MKRN2Q9H000 416 aaKnown RBP21.78■■□□□ 1.08
CDKN3-204ENST00000442975 SEPT11Q9NVA2 429 aaKnown RBP21.78■■□□□ 1.08
CDKN3-204ENST00000442975 DLL3Q9NYJ7 618 aa21.78■■□□□ 1.08
CDKN3-204ENST00000442975 RRN3Q9NYV6 651 aa21.78■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms