RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 CACNA2D2Q9NY47 1150 aa10.84□□□□□ -0.67
MCF2L-216ENST00000439475 SUN2Q9UH99 717 aa10.84□□□□□ -0.67
MCF2L-216ENST00000439475 GGA2Q9UJY4 613 aa10.84□□□□□ -0.67
MCF2L-216ENST00000439475 NOCTQ9UK39 431 aaKnown RBP10.84□□□□□ -0.67
MCF2L-216ENST00000439475 CLEC4EQ9ULY5 219 aa10.84□□□□□ -0.67
MCF2L-216ENST00000439475 USP18Q9UMW8 372 aa10.84□□□□□ -0.67
MCF2L-216ENST00000439475 PCDHGA5Q9Y5G8 931 aa10.84□□□□□ -0.67
MCF2L-216ENST00000439475 RALGAPA1Q6GYQ0 2036 aa10.84□□□□□ -0.67
MCF2L-216ENST00000439475 A0A1B0GTH6 734 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 ANTXRLA6NF34 631 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 LUC7L3O95232 432 aaKnown RBP10.83□□□□□ -0.68
MCF2L-216ENST00000439475 ASLP04424 464 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 TPM3P06753 285 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 UNGP13051 313 aaPredicted RBP10.83□□□□□ -0.68
MCF2L-216ENST00000439475 CHRNB2P17787 502 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 SDHBP21912 280 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 MMP8P22894 467 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 HLA-FP30511 346 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 NNMTP40261 264 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 SLC12A1Q13621 1099 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 ZNF234Q14588 700 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 NR1I3Q14994 352 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 SLC25A52Q3SY17 297 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 PLK5Q496M5 336 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 MBLAC2Q68D91 279 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 NADSYN1Q6IA69 706 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 SERPINA13PQ6UXR4 307 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 LRRC31Q6UY01 552 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 KIAA0907Q7Z7F0 614 aaPredicted RBP10.83□□□□□ -0.68
MCF2L-216ENST00000439475 KBTBD6Q86V97 674 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 CFAP52Q8N1V2 620 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 SLC20A1Q8WUM9 679 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 IQCDQ96DY2 449 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 RPRD1AQ96P16 312 aaPredicted RBP10.83□□□□□ -0.68
MCF2L-216ENST00000439475 ACOX2Q99424 681 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 C11orf70Q9BRQ4 267 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 SELENOOQ9BVL4 669 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 ADAM22Q9P0K1 906 aa10.83□□□□□ -0.68
MCF2L-216ENST00000439475 PTPRZ1P23471 2315 aaPredicted RBP10.83□□□□□ -0.68
MCF2L-216ENST00000439475 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.82□□□□□ -0.68
MCF2L-216ENST00000439475 ANKRD62A6NC57 917 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 PRR5-ARHGAP8B1AHC4 643 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 WASH3PC4AMC7 463 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 EPHX1P07099 455 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 DLDP09622 509 aaKnown RBP10.82□□□□□ -0.68
MCF2L-216ENST00000439475 KRT3P12035 628 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 GABRG2P18507 467 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 HOXC13P31276 330 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 SDC4P31431 198 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 RDXP35241 583 aaKnown RBP10.82□□□□□ -0.68
MCF2L-216ENST00000439475 P2RY2P41231 377 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 DPP6P42658 865 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 IL12RB1P42701 662 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 CXCR3P49682 368 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 RPS24P62847 133 aaKnown RBP10.82□□□□□ -0.68
MCF2L-216ENST00000439475 PITX1P78337 314 aaPredicted RBP10.82□□□□□ -0.68
MCF2L-216ENST00000439475 ARHGAP8P85298 464 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 FANCCQ00597 558 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 CENPCQ03188 943 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 SPEM2Q0P670 501 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 ZNF177Q13360 481 aaPredicted RBP10.82□□□□□ -0.68
MCF2L-216ENST00000439475 ENPP2Q13822 863 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 AUHQ13825 339 aaKnown RBP10.82□□□□□ -0.68
MCF2L-216ENST00000439475 ASIC2Q16515 512 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 CLEC16AQ2KHT3 1053 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 ZSCAN23Q3MJ62 389 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 ARL13BQ3SXY8 428 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 FNDC3BQ53EP0 1204 aaKnown RBP10.82□□□□□ -0.68
MCF2L-216ENST00000439475 SPDYCQ5MJ68 293 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 SFMBT2Q5VUG0 894 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 RNF219Q5W0B1 726 aaPredicted RBP10.82□□□□□ -0.68
MCF2L-216ENST00000439475 MMS22LQ6ZRQ5 1243 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 LPCAT2Q7L5N7 544 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 LUZP1Q86V48 1076 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 PHF13Q86YI8 300 aaPredicted RBP10.82□□□□□ -0.68
MCF2L-216ENST00000439475 KIAA2013Q8IYS2 634 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 OLIG1Q8TAK6 271 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 NT5C3BQ969T7 300 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 NAP1L5Q96NT1 182 aaPredicted RBP10.82□□□□□ -0.68
MCF2L-216ENST00000439475 TKTL2Q9H0I9 626 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 DUSP15Q9H1R2 295 aaPredicted RBP10.82□□□□□ -0.68
MCF2L-216ENST00000439475 TMEM59LQ9UK28 342 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 HCN2Q9UL51 889 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 INVSQ9Y283 1065 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 RAD54BQ9Y620 910 aa10.82□□□□□ -0.68
MCF2L-216ENST00000439475 A0A1B0GVM2 712 aa10.81□□□□□ -0.68
MCF2L-216ENST00000439475 A0A1W2PQF6 199 aa10.81□□□□□ -0.68
MCF2L-216ENST00000439475 TCAF2A6NFQ2 919 aa10.81□□□□□ -0.68
MCF2L-216ENST00000439475 AP5Z1O43299 807 aa10.81□□□□□ -0.68
MCF2L-216ENST00000439475 NDUFS2O75306 463 aa10.81□□□□□ -0.68
MCF2L-216ENST00000439475 PAGE1O75459 146 aa10.81□□□□□ -0.68
MCF2L-216ENST00000439475 EPN2O95208 641 aa10.81□□□□□ -0.68
MCF2L-216ENST00000439475 SRPRAP08240 638 aaKnown RBP10.81□□□□□ -0.68
MCF2L-216ENST00000439475 CHRM1P11229 460 aaPredicted RBP10.81□□□□□ -0.68
MCF2L-216ENST00000439475 ACADMP11310 421 aa10.81□□□□□ -0.68
MCF2L-216ENST00000439475 PDGFRAP16234 1089 aa10.81□□□□□ -0.68
MCF2L-216ENST00000439475 CD70P32970 193 aa10.81□□□□□ -0.68
MCF2L-216ENST00000439475 SGSHP51688 502 aa10.81□□□□□ -0.68
MCF2L-216ENST00000439475 LMNB2Q03252 620 aa10.81□□□□□ -0.68
MCF2L-216ENST00000439475 SULT2A1Q06520 285 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms