RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 TRUB2O95900 331 aaKnown RBP13.74□□□□□ -0.21
ACTN1-204ENST00000438964 PRKCGP05129 697 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 TFE3P19532 575 aaPredicted RBP13.74□□□□□ -0.21
ACTN1-204ENST00000438964 ABCD1P33897 745 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 CTBSQ01459 385 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 TRPC3Q13507 836 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 PGM5Q15124 567 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 TBCCQ15814 346 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 MTX3Q5HYI7 312 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 PITRM1Q5JRX3 1037 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 ZNF534Q76KX8 674 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 DEPTORQ8TB45 409 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 FBXL8Q96CD0 374 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 SIGLEC10Q96LC7 697 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 PPP1R16BQ96T49 567 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 KCNK16Q96T55 309 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 SLC29A1Q99808 456 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 TRPV6Q9H1D0 765 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 NDUFA13Q9P0J0 144 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 SEPT10Q9P0V9 454 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 DOCK5Q9H7D0 1870 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 GREB1LQ9C091 1923 aaPredicted RBP13.74□□□□□ -0.21
ACTN1-204ENST00000438964 TMEM233B4DJY2 109 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 CASQ2O14958 399 aaPredicted RBP13.74□□□□□ -0.21
ACTN1-204ENST00000438964 TPST1O60507 370 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 UGT1A6P19224 532 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 GARTP22102 1010 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 PIK3R1P27986 724 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 EPHX2P34913 555 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 ABCE1P61221 599 aaKnown RBP13.74□□□□□ -0.21
ACTN1-204ENST00000438964 RC3H1Q5TC82 1133 aaKnown RBP13.74□□□□□ -0.21
ACTN1-204ENST00000438964 ARHGEF16Q5VV41 709 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 KRT80Q6KB66 452 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 POTEHQ6S545 545 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 PLD5Q8N7P1 536 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 UBR7Q8N806 425 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 ZBTB8BQ8NAP8 495 aaPredicted RBP13.74□□□□□ -0.21
ACTN1-204ENST00000438964 ACVR1CQ8NER5 493 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 CLEC4DQ8WXI8 215 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 C8orf37Q96NL8 207 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 ACO2Q99798 780 aaKnown RBP13.74□□□□□ -0.21
ACTN1-204ENST00000438964 ADPGKQ9BRR6 497 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 TMEM39BQ9GZU3 492 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 KLC2Q9H0B6 622 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 TMX2Q9Y320 296 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 RBMX2Q9Y388 322 aaKnown RBP13.74□□□□□ -0.21
ACTN1-204ENST00000438964 UBIAD1Q9Y5Z9 338 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 GMEB1Q9Y692 573 aa13.74□□□□□ -0.21
ACTN1-204ENST00000438964 M0QYV0 167 aa13.73□□□□□ -0.21
ACTN1-204ENST00000438964 IL1BP01584 269 aa13.73□□□□□ -0.21
ACTN1-204ENST00000438964 SERPINE1P05121 402 aa13.73□□□□□ -0.21
ACTN1-204ENST00000438964 GNAO1P09471 354 aa13.73□□□□□ -0.21
ACTN1-204ENST00000438964 PRKCHP24723 683 aa13.73□□□□□ -0.21
ACTN1-204ENST00000438964 OR6B2Q6IFH4 312 aa13.73□□□□□ -0.21
ACTN1-204ENST00000438964 UTS2BQ765I0 119 aa13.73□□□□□ -0.21
ACTN1-204ENST00000438964 SAMD3Q8N6K7 520 aa13.73□□□□□ -0.21
ACTN1-204ENST00000438964 ZNF341Q9BYN7 854 aa13.73□□□□□ -0.21
ACTN1-204ENST00000438964 PCDHA10Q9Y5I2 948 aa13.73□□□□□ -0.21
ACTN1-204ENST00000438964 ARHGEF37A1IGU5 675 aa13.73□□□□□ -0.21
ACTN1-204ENST00000438964 PDGFRAP16234 1089 aa13.73□□□□□ -0.21
ACTN1-204ENST00000438964 MGAT1P26572 445 aa13.73□□□□□ -0.21
ACTN1-204ENST00000438964 GABRB2P47870 512 aa13.73□□□□□ -0.21
ACTN1-204ENST00000438964 NR1H2P55055 460 aa13.73□□□□□ -0.21
ACTN1-204ENST00000438964 BNC2Q6ZN30 1099 aaPredicted RBP13.73□□□□□ -0.21
ACTN1-204ENST00000438964 PATL1Q86TB9 770 aaKnown RBP13.73□□□□□ -0.21
ACTN1-204ENST00000438964 XYLT1Q86Y38 959 aa13.73□□□□□ -0.21
ACTN1-204ENST00000438964 KBTBD7Q8WVZ9 684 aa13.73□□□□□ -0.21
ACTN1-204ENST00000438964 PPWD1Q96BP3 646 aaKnown RBP13.73□□□□□ -0.21
ACTN1-204ENST00000438964 AGAP3Q96P47 875 aa13.73□□□□□ -0.21
ACTN1-204ENST00000438964 SUDS3Q9H7L9 328 aaPredicted RBP13.73□□□□□ -0.21
ACTN1-204ENST00000438964 FAM49BQ9NUQ9 324 aa13.73□□□□□ -0.21
ACTN1-204ENST00000438964 PAIP2BQ9ULR5 123 aaKnown RBP13.73□□□□□ -0.21
ACTN1-204ENST00000438964 TBXAS1P24557 533 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-204ENST00000438964 ZNF699Q32M78 642 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 PPP1R2P3Q6NXS1 205 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 ELMSAN1Q6PJG2 1045 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 TDRD5Q8NAT2 981 aaKnown RBP13.72□□□□□ -0.21
ACTN1-204ENST00000438964 RXFP2Q8WXD0 754 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 ZFRQ96KR1 1074 aaKnown RBP13.72□□□□□ -0.21
ACTN1-204ENST00000438964 EBNA1BP2Q99848 306 aaKnown RBP13.72□□□□□ -0.21
ACTN1-204ENST00000438964 TCF7L2Q9NQB0 619 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 ARHGAP28Q9P2N2 729 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 COPG2Q9UBF2 871 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 FAM149AA5PLN7 773 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-204ENST00000438964 NRP1O14786 923 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 CHADO15335 359 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 GJB1P08034 283 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 PIM1P11309 404 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-204ENST00000438964 CD247P20963 164 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 KPNA1P52294 538 aaPredicted RBP13.72□□□□□ -0.21
ACTN1-204ENST00000438964 ZNF132P52740 706 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 APOFQ13790 326 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 NAT16Q8N8M0 369 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 SMYD1Q8NB12 490 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 ATP2A3Q93084 1043 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 RPL10LQ96L21 214 aaKnown RBP13.72□□□□□ -0.21
ACTN1-204ENST00000438964 CGRRF1Q99675 332 aa13.72□□□□□ -0.21
ACTN1-204ENST00000438964 NAA50Q9GZZ1 169 aaKnown RBP13.72□□□□□ -0.21
ACTN1-204ENST00000438964 EPB41L1Q9H4G0 881 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms