RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 BRMS1LQ5PSV4 323 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 C6orf89Q6UWU4 347 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 DENND5BQ6ZUT9 1274 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 SIGLEC10Q96LC7 697 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 PITPNM1O00562 1244 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 MTSS1O43312 755 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 NBNO60934 754 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 AMHP03971 560 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 VIMP08670 466 aaKnown RBP26.46■■□□□ 1.83
CPNE1-216ENST00000437340 WASHC5Q12768 1159 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 BTBD8Q5XKL5 378 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 PIGWQ7Z7B1 504 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 ABI1Q8IZP0 508 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 DENND1AQ8TEH3 1009 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 MZB1Q8WU39 189 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 ALKBH8Q96BT7 664 aaKnown RBP26.46■■□□□ 1.83
CPNE1-216ENST00000437340 MRRFQ96E11 262 aaKnown RBP26.46■■□□□ 1.83
CPNE1-216ENST00000437340 MAGEB18Q96M61 343 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 ARHGEF38Q9NXL2 777 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 IGSF9Q9P2J2 1179 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 DNAJB4Q9UDY4 337 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 PRG3Q9Y2Y8 225 aaPredicted RBP26.46■■□□□ 1.83
CPNE1-216ENST00000437340 IKBKGQ9Y6K9 419 aa26.46■■□□□ 1.83
CPNE1-216ENST00000437340 TET1Q8NFU7 2136 aa26.45■■□□□ 1.83
CPNE1-216ENST00000437340 IQANK1A0A1B0GTG1 560 aa26.45■■□□□ 1.82
CPNE1-216ENST00000437340 IRAK2O43187 625 aa26.45■■□□□ 1.82
CPNE1-216ENST00000437340 CPP00450 1065 aa26.45■■□□□ 1.82
CPNE1-216ENST00000437340 IL9RQ01113 521 aa26.45■■□□□ 1.82
CPNE1-216ENST00000437340 PPIDQ08752 370 aaKnown RBP26.45■■□□□ 1.82
CPNE1-216ENST00000437340 FAAP100Q0VG06 881 aa26.45■■□□□ 1.82
CPNE1-216ENST00000437340 GPNMBQ14956 572 aa26.45■■□□□ 1.82
CPNE1-216ENST00000437340 FAM182AQ5T1J6 154 aa26.45■■□□□ 1.82
CPNE1-216ENST00000437340 TAX1BP1Q86VP1 789 aa26.45■■□□□ 1.82
CPNE1-216ENST00000437340 ANKLE1Q8NAG6 615 aa26.45■■□□□ 1.82
CPNE1-216ENST00000437340 RNF34Q969K3 372 aa26.45■■□□□ 1.82
CPNE1-216ENST00000437340 EBNA1BP2Q99848 306 aaKnown RBP26.45■■□□□ 1.82
CPNE1-216ENST00000437340 SMOC2Q9H3U7 446 aa26.45■■□□□ 1.82
CPNE1-216ENST00000437340 TTLL3Q9Y4R7 772 aa26.45■■□□□ 1.82
CPNE1-216ENST00000437340 PCDHB7Q9Y5E2 793 aa26.45■■□□□ 1.82
CPNE1-216ENST00000437340 PRKCHP24723 683 aa26.44■■□□□ 1.82
CPNE1-216ENST00000437340 GBP2P32456 591 aaPredicted RBP26.44■■□□□ 1.82
CPNE1-216ENST00000437340 HTR7P34969 479 aa26.44■■□□□ 1.82
CPNE1-216ENST00000437340 CORO7P57737 925 aa26.44■■□□□ 1.82
CPNE1-216ENST00000437340 TLE2Q04725 743 aa26.44■■□□□ 1.82
CPNE1-216ENST00000437340 KBTBD12Q3ZCT8 623 aa26.44■■□□□ 1.82
CPNE1-216ENST00000437340 DBF4BQ8NFT6 615 aa26.44■■□□□ 1.82
CPNE1-216ENST00000437340 APBB2Q92870 758 aa26.44■■□□□ 1.82
CPNE1-216ENST00000437340 CFAP36Q96G28 342 aa26.44■■□□□ 1.82
CPNE1-216ENST00000437340 C8orf48Q96LL4 319 aa26.44■■□□□ 1.82
CPNE1-216ENST00000437340 HAPLN3Q96S86 360 aa26.44■■□□□ 1.82
CPNE1-216ENST00000437340 TRIM66O15016 1216 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 TYROBPO43914 113 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 KIAA0754O94854 1291 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 LRIG2O94898 1065 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 C1QAP02745 245 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 OR4Q2P0C623 313 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 VARS2Q5ST30 1063 aaKnown RBP26.43■■□□□ 1.82
CPNE1-216ENST00000437340 C1orf53Q5VUE5 145 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 LRRC8BQ6P9F7 803 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 ZNF567Q8N184 647 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 SEPT8Q92599 483 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 HDAC11Q96DB2 347 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 CABS1Q96KC9 395 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 SAMD15Q9P1V8 674 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 ADAM28Q9UKQ2 775 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 ASMTLO95671 621 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 APOEP02649 317 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 INHBAP08476 426 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 EPHB2P29323 1055 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 MAGEA11P43364 429 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 GALNT2Q10471 571 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 MRPL58Q14197 206 aaKnown RBP26.43■■□□□ 1.82
CPNE1-216ENST00000437340 CYS1Q717R9 158 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 PAWRQ96IZ0 340 aaKnown RBP26.43■■□□□ 1.82
CPNE1-216ENST00000437340 TOX2Q96NM4 488 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 KIF9Q9HAQ2 790 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 ABI2Q9NYB9 513 aaPredicted RBP26.43■■□□□ 1.82
CPNE1-216ENST00000437340 ZNF180Q9UJW8 692 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 NR2E3Q9Y5X4 410 aa26.43■■□□□ 1.82
CPNE1-216ENST00000437340 A0A1W2PPM1 405 aa26.42■■□□□ 1.82
CPNE1-216ENST00000437340 SPAG7O75391 227 aa26.42■■□□□ 1.82
CPNE1-216ENST00000437340 KRT4P19013 534 aa26.42■■□□□ 1.82
CPNE1-216ENST00000437340 SCD5Q86SK9 330 aa26.42■■□□□ 1.82
CPNE1-216ENST00000437340 SLC26A11Q86WA9 606 aa26.42■■□□□ 1.82
CPNE1-216ENST00000437340 SCN4BQ8IWT1 228 aa26.42■■□□□ 1.82
CPNE1-216ENST00000437340 C4orf33Q8N1A6 199 aa26.42■■□□□ 1.82
CPNE1-216ENST00000437340 CCDC197Q8NCU1 140 aa26.42■■□□□ 1.82
CPNE1-216ENST00000437340 GSDMBQ8TAX9 411 aa26.42■■□□□ 1.82
CPNE1-216ENST00000437340 CASD1Q96PB1 797 aa26.42■■□□□ 1.82
CPNE1-216ENST00000437340 HIPK3Q9H422 1215 aa26.42■■□□□ 1.82
CPNE1-216ENST00000437340 FBXO44Q9H4M3 255 aa26.42■■□□□ 1.82
CPNE1-216ENST00000437340 C11orf49Q9H6J7 331 aa26.42■■□□□ 1.82
CPNE1-216ENST00000437340 PLAC1Q9HBJ0 212 aa26.42■■□□□ 1.82
CPNE1-216ENST00000437340 MLXIPLQ9NP71 852 aa26.42■■□□□ 1.82
CPNE1-216ENST00000437340 SEPT10Q9P0V9 454 aa26.42■■□□□ 1.82
CPNE1-216ENST00000437340 SCML2Q9UQR0 700 aa26.42■■□□□ 1.82
CPNE1-216ENST00000437340 OR6C75A6NL08 312 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 TCP11X1B4DZS4 312 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 HOXA2O43364 376 aa26.41■■□□□ 1.82
CPNE1-216ENST00000437340 CCR1P32246 355 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms