RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 FDFT1P37268 417 aa20.14■□□□□ 0.81
VRK2-205ENST00000432057 GRIA1P42261 906 aa20.14■□□□□ 0.81
VRK2-205ENST00000432057 MAGEA3P43357 314 aa20.14■□□□□ 0.81
VRK2-205ENST00000432057 CCL23P55773 120 aa20.14■□□□□ 0.81
VRK2-205ENST00000432057 RASA2Q15283 850 aa20.14■□□□□ 0.81
VRK2-205ENST00000432057 ZNF280DQ6N043 979 aa20.14■□□□□ 0.81
VRK2-205ENST00000432057 PDZD4Q76G19 769 aaPredicted RBP20.14■□□□□ 0.81
VRK2-205ENST00000432057 ZNF567Q8N184 647 aa20.14■□□□□ 0.81
VRK2-205ENST00000432057 TRABDQ9H4I3 376 aa20.14■□□□□ 0.81
VRK2-205ENST00000432057 CCDC134Q9H6E4 229 aa20.14■□□□□ 0.81
VRK2-205ENST00000432057 ARHGEF38Q9NXL2 777 aa20.14■□□□□ 0.81
VRK2-205ENST00000432057 OGDHLQ9ULD0 1010 aa20.14■□□□□ 0.81
VRK2-205ENST00000432057 TTLL3Q9Y4R7 772 aa20.14■□□□□ 0.81
VRK2-205ENST00000432057 NT5C1B-RDH14C9J2C7 533 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 SPAG7O75391 227 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 CCL5P13501 91 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 PSMB4P28070 264 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 ARPP19P56211 112 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 MRPL58Q14197 206 aaKnown RBP20.13■□□□□ 0.81
VRK2-205ENST00000432057 NUP93Q8N1F7 819 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 DEPDC1BQ8WUY9 529 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 DCAKDQ8WVC6 231 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 DYDC1Q8WWB3 177 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 C8orf48Q96LL4 319 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 ZNF317Q96PQ6 595 aaPredicted RBP20.13■□□□□ 0.81
VRK2-205ENST00000432057 CYTH2Q99418 400 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 FERMT1Q9BQL6 677 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 PPP1R12CQ9BZL4 782 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 ZMYND15Q9H091 742 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 RNF208Q9H0X6 261 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 OSER1Q9NX31 292 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 ZC3H7BQ9UGR2 993 aaKnown RBP20.13■□□□□ 0.81
VRK2-205ENST00000432057 RAD54BQ9Y620 910 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 DOCK4Q8N1I0 1966 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 TBKBP1A7MCY6 615 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 KCNK1O00180 336 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 TRIM66O15016 1216 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 SPAG6O75602 509 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 CPP00450 1065 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 ALDH2P05091 517 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 FGFR3P22607 806 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 ZNF135P52742 658 aaPredicted RBP20.13■□□□□ 0.81
VRK2-205ENST00000432057 USP46P62068 366 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 FUT10Q6P4F1 479 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 ADGRD1Q6QNK2 874 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 C4orf33Q8N1A6 199 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 CRIPAKQ8N1N5 446 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 MPP5Q8N3R9 675 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 ATAD1Q8NBU5 361 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 SIK2Q9H0K1 926 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 OSBPL2Q9H1P3 480 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 HIPK3Q9H422 1215 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 PLAC1Q9HBJ0 212 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 NEU3Q9UQ49 428 aa20.13■□□□□ 0.81
VRK2-205ENST00000432057 A0A1W2PPM1 405 aa20.12■□□□□ 0.81
VRK2-205ENST00000432057 SOAT2O75908 522 aa20.12■□□□□ 0.81
VRK2-205ENST00000432057 MSH2P43246 934 aa20.12■□□□□ 0.81
VRK2-205ENST00000432057 PPIDQ08752 370 aaKnown RBP20.12■□□□□ 0.81
VRK2-205ENST00000432057 KBTBD12Q3ZCT8 623 aa20.12■□□□□ 0.81
VRK2-205ENST00000432057 BRMS1LQ5PSV4 323 aa20.12■□□□□ 0.81
VRK2-205ENST00000432057 TAX1BP1Q86VP1 789 aa20.12■□□□□ 0.81
VRK2-205ENST00000432057 TMEM173Q86WV6 379 aaPredicted RBP20.12■□□□□ 0.81
VRK2-205ENST00000432057 PDCD7Q8N8D1 485 aaKnown RBP20.12■□□□□ 0.81
VRK2-205ENST00000432057 GDAP1Q8TB36 358 aa20.12■□□□□ 0.81
VRK2-205ENST00000432057 GPR152Q8TDT2 470 aa20.12■□□□□ 0.81
VRK2-205ENST00000432057 SIGLEC10Q96LC7 697 aa20.12■□□□□ 0.81
VRK2-205ENST00000432057 TRIM56Q9BRZ2 755 aaKnown RBP20.12■□□□□ 0.81
VRK2-205ENST00000432057 XAB2Q9HCS7 855 aaKnown RBP20.12■□□□□ 0.81
VRK2-205ENST00000432057 SCML2Q9UQR0 700 aa20.12■□□□□ 0.81
VRK2-205ENST00000432057 OR6C75A6NL08 312 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 HOXA2O43364 376 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 SRGAP2BP0DMP2 458 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 CPB1P15086 417 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 PTPN3P26045 913 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 CYP2C18P33260 490 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 MAGEA11P43364 429 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 GALNT2Q10471 571 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 RSPO2Q6UXX9 243 aaPredicted RBP20.11■□□□□ 0.81
VRK2-205ENST00000432057 PRPF39Q86UA1 669 aaKnown RBP20.11■□□□□ 0.81
VRK2-205ENST00000432057 LRRC34Q8IZ02 419 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 LRRC39Q96DD0 335 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 NKIRAS1Q9NYS0 192 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 GMIPQ9P107 970 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 FAM47DPA6NHR8 397 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 PAGE1O75459 146 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 STX2P32856 288 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 SERPINB6P35237 376 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 RTP2Q5QGT7 225 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 RWDD4Q6NW29 188 aaKnown RBP20.11■□□□□ 0.81
VRK2-205ENST00000432057 DEFB128Q7Z7B8 93 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 CPLX4Q7Z7G2 160 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 MZB1Q8WU39 189 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 BCL7CQ8WUZ0 217 aaPredicted RBP20.11■□□□□ 0.81
VRK2-205ENST00000432057 HDAC11Q96DB2 347 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 CELF6Q96J87 481 aaKnown RBP20.11■□□□□ 0.81
VRK2-205ENST00000432057 MRPL9Q9BYD2 267 aaKnown RBP20.11■□□□□ 0.81
VRK2-205ENST00000432057 SENP1Q9P0U3 644 aa20.11■□□□□ 0.81
VRK2-205ENST00000432057 KLHL8Q9P2G9 620 aaPredicted RBP20.11■□□□□ 0.81
VRK2-205ENST00000432057 NCAM2O15394 837 aa20.1■□□□□ 0.81
VRK2-205ENST00000432057 C1QAP02745 245 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms