RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 NRP1O14786 923 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 B3GAT3O94766 335 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 METTL18O95568 372 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 ACRP10323 421 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 RAG1P15918 1043 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 GATMP50440 423 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 FAM189BP81408 668 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 TUSC3Q13454 348 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 PRKD1Q15139 912 aaPredicted RBP13.22□□□□□ -0.29
DDX56-204ENST00000431640 PARP6Q2NL67 630 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 KBTBD12Q3ZCT8 623 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 TTC31Q49AM3 519 aaPredicted RBP13.22□□□□□ -0.29
DDX56-204ENST00000431640 CLLU1OSQ5K130 101 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 OTUD1Q5VV17 481 aaPredicted RBP13.22□□□□□ -0.29
DDX56-204ENST00000431640 PM20D1Q6GTS8 502 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.22□□□□□ -0.29
DDX56-204ENST00000431640 RFX8Q6ZV50 586 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 BEND5Q7L4P6 421 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 PYROXD2Q8N2H3 581 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 BANPQ8N9N5 519 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 MTBPQ96DY7 904 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 CFAP36Q96G28 342 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 SIGLEC10Q96LC7 697 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 NAT9Q9BTE0 207 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 MAGEB5Q9BZ81 275 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 VPS11Q9H270 941 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 PRKAG3Q9UGI9 489 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 TIMM13Q9Y5L4 95 aaPredicted RBP13.22□□□□□ -0.29
DDX56-204ENST00000431640 TTC3P53804 2025 aa13.22□□□□□ -0.29
DDX56-204ENST00000431640 YJEFN3A6XGL0 299 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 TDRD15B5MCY1 1934 aaKnown RBP13.21□□□□□ -0.29
DDX56-204ENST00000431640 HHLA1C9JL84 531 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 E7ENQ6 273 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 INPPL1O15357 1258 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 MTSS1O43312 755 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 CREB3O43889 395 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 AVILO75366 819 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 MAP3K6O95382 1288 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 APOEP02649 317 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 FYNP06241 537 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 SNRPAP09012 282 aaKnown RBP13.21□□□□□ -0.29
DDX56-204ENST00000431640 USP17L7P0C7H9 530 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 NCAM1P13591 858 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 TYMPP19971 482 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 FOXN2P32314 431 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 SERPINB9P50453 376 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 SLC18A2Q05940 514 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 AP1B1Q10567 949 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 DPYSQ14117 519 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 FNDC1Q4ZHG4 1894 aaPredicted RBP13.21□□□□□ -0.29
DDX56-204ENST00000431640 RNF43Q68DV7 783 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 LVRNQ6Q4G3 990 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 TMCO2Q7Z6W1 182 aaPredicted RBP13.21□□□□□ -0.29
DDX56-204ENST00000431640 COLGALT1Q8NBJ5 622 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 RNF169Q8NCN4 708 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 C3orf58Q8NDZ4 430 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 ZMIZ2Q8NF64 920 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 GSDMBQ8TAX9 411 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 SEPT8Q92599 483 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 BADQ92934 168 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 KCNK16Q96T55 309 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 WDCPQ9H6R7 721 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 PIGVQ9NUD9 493 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.21□□□□□ -0.29
DDX56-204ENST00000431640 HCSTQ9UBK5 93 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 PCDHA11Q9Y5I1 949 aa13.21□□□□□ -0.29
DDX56-204ENST00000431640 SYNJ2BP-COX16A0A087WUM0 186 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 SDR42E2A6NKP2 422 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 DCLK1O15075 740 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 DNAJC8O75937 253 aaPredicted RBP13.2□□□□□ -0.3
DDX56-204ENST00000431640 KRT38O76015 456 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 EOMESO95936 686 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 ALADP13716 330 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 MX2P20592 715 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 SCTRP47872 440 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 CXCR3P49682 368 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 DEFB103AP81534 67 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 TSPY1Q01534 308 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 EFTUD2Q15029 972 aaKnown RBP eCLIP13.2□□□□□ -0.37e-7■■■■□ 22.7
DDX56-204ENST00000431640 FAXCQ5TGI0 409 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 LRRC8BQ6P9F7 803 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 CNKSR3Q6P9H4 555 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 HFE2Q6ZVN8 426 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 SLC24A5Q71RS6 500 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 CCNYQ8ND76 341 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 MYLPFQ96A32 169 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 P2RY11Q96G91 374 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 FTHL17Q9BXU8 183 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 KIF9Q9HAQ2 790 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 WDR6Q9NNW5 1121 aaKnown RBP13.2□□□□□ -0.3
DDX56-204ENST00000431640 DMAP1Q9NPF5 467 aaPredicted RBP13.2□□□□□ -0.3
DDX56-204ENST00000431640 COX16Q9P0S2 106 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 PHTF1Q9UMS5 762 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 TTLL3Q9Y4R7 772 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 MFSD11O43934 449 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 LPXNO60711 386 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 PARNO95453 639 aaKnown RBP13.2□□□□□ -0.3
DDX56-204ENST00000431640 POMCP01189 267 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 CNTFP26441 200 aa13.2□□□□□ -0.3
DDX56-204ENST00000431640 ALDH3A1P30838 453 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms