RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 SLC11A2P49281 568 aa12.98□□□□□ -0.33
SMPD4-204ENST00000430682 NUMBP49757 651 aa12.98□□□□□ -0.33
SMPD4-204ENST00000430682 IRAK1P51617 712 aa12.98□□□□□ -0.33
SMPD4-204ENST00000430682 LIMK1P53667 647 aa12.98□□□□□ -0.33
SMPD4-204ENST00000430682 LMAN2Q12907 356 aa12.98□□□□□ -0.33
SMPD4-204ENST00000430682 NNTQ13423 1086 aa12.98□□□□□ -0.33
SMPD4-204ENST00000430682 NCAPHQ15003 741 aa12.98□□□□□ -0.33
SMPD4-204ENST00000430682 CT47A1Q5JQC4 288 aaPredicted RBP12.98□□□□□ -0.33
SMPD4-204ENST00000430682 TAF3Q5VWG9 929 aa12.98□□□□□ -0.33
SMPD4-204ENST00000430682 RAP1GAP2Q684P5 730 aa12.98□□□□□ -0.33
SMPD4-204ENST00000430682 MBLAC2Q68D91 279 aa12.98□□□□□ -0.33
SMPD4-204ENST00000430682 OR6B2Q6IFH4 312 aa12.98□□□□□ -0.33
SMPD4-204ENST00000430682 KIAA1324Q6UXG2 1013 aaKnown RBP12.98□□□□□ -0.33
SMPD4-204ENST00000430682 LPCAT2Q7L5N7 544 aa12.98□□□□□ -0.33
SMPD4-204ENST00000430682 APTXQ7Z2E3 356 aaKnown RBP12.98□□□□□ -0.33
SMPD4-204ENST00000430682 NOP9Q86U38 636 aaKnown RBP12.98□□□□□ -0.33
SMPD4-204ENST00000430682 C11orf74Q86VG3 221 aa12.98□□□□□ -0.33
SMPD4-204ENST00000430682 CACUL1Q86Y37 369 aa12.98□□□□□ -0.33
SMPD4-204ENST00000430682 C12orf50Q8NA57 414 aaPredicted RBP12.98□□□□□ -0.33
SMPD4-204ENST00000430682 SPACA7Q96KW9 195 aa12.98□□□□□ -0.33
SMPD4-204ENST00000430682 PRMT1Q99873 361 aaKnown RBP12.98□□□□□ -0.33
SMPD4-204ENST00000430682 ANLNQ9NQW6 1124 aa12.98□□□□□ -0.33
SMPD4-204ENST00000430682 PILRBQ9UKJ0 227 aa12.98□□□□□ -0.33
SMPD4-204ENST00000430682 MAP1BP46821 2468 aaKnown RBP12.98□□□□□ -0.33
SMPD4-204ENST00000430682 PLXNA2O75051 1894 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 SYNJ2BP-COX16A0A087WUM0 186 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 KCNU1A8MYU2 1149 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 CDX4O14627 284 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-204ENST00000430682 CAPN9O14815 690 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 EPHX1P07099 455 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 CYP11B1P15538 503 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 CHRNB2P17787 502 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 TACR2P21452 398 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 CDH5P33151 784 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-204ENST00000430682 KRT9P35527 623 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 GGCXP38435 758 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 CTSOP43234 321 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-204ENST00000430682 ZNF445P59923 1031 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 RPL6Q02878 288 aaKnown RBP12.97□□□□□ -0.33
SMPD4-204ENST00000430682 EIF4HQ15056 248 aaKnown RBP12.97□□□□□ -0.33
SMPD4-204ENST00000430682 MPP7Q5T2T1 576 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 ARTNQ5T4W7 220 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 PEAR1Q5VY43 1037 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-204ENST00000430682 TRNP1Q6NT89 227 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 CIR1Q86X95 450 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-204ENST00000430682 TMPRSS6Q8IU80 811 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 LGI2Q8N0V4 545 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 CARNMT1Q8N4J0 409 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 HJURPQ8NCD3 748 aaPredicted RBP12.97□□□□□ -0.33
SMPD4-204ENST00000430682 FIBINQ8TAL6 211 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 SLC20A1Q8WUM9 679 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 MRGPRX3Q96LB0 322 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 GBP4Q96PP9 640 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 EDEM2Q9BV94 578 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 PRDM16Q9HAZ2 1276 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 ITM2CQ9NQX7 267 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 ASNSD1Q9NWL6 643 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 COX16Q9P0S2 106 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 TMEM63CQ9P1W3 806 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 USP36Q9P275 1121 aaKnown RBP12.97□□□□□ -0.33
SMPD4-204ENST00000430682 SIK3Q9Y2K2 1263 aa12.97□□□□□ -0.33
SMPD4-204ENST00000430682 CHD5Q8TDI0 1954 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 C4orf47A7E2U8 309 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 F8VZ95 297 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 MMEP08473 750 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 SDHBP21912 280 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 CSKP41240 450 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 COPB1P53618 953 aaKnown RBP12.96□□□□□ -0.33
SMPD4-204ENST00000430682 FOXK2Q01167 660 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 SLC6A3Q01959 620 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 ZNF33AQ06730 810 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 CAMK2GQ13555 558 aaPredicted RBP12.96□□□□□ -0.33
SMPD4-204ENST00000430682 EFHC1Q5JVL4 640 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 LYSMD4Q5XG99 296 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 SERPINA13PQ6UXR4 307 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 SLC26A9Q7LBE3 791 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 C14orf80Q86SX3 495 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 METTL3Q86U44 580 aaKnown RBP12.96□□□□□ -0.33
SMPD4-204ENST00000430682 MFN1Q8IWA4 741 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 APCDD1Q8J025 514 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 AHI1Q8N157 1196 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 OR52K2Q8NGK3 314 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 EPS8L1Q8TE68 723 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 WFIKKN2Q8TEU8 576 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 UCMAQ8WVF2 138 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 IGSF8Q969P0 613 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 TTC17Q96AE7 1141 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 STK33Q9BYT3 514 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 FAM204AQ9H8W3 233 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 NLRC4Q9NPP4 1024 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 PRSS16Q9NQE7 514 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 TMPRSS4Q9NRS4 437 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 DDIT4Q9NX09 232 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 WSB2Q9NYS7 404 aaPredicted RBP12.96□□□□□ -0.33
SMPD4-204ENST00000430682 NOCTQ9UK39 431 aaKnown RBP12.96□□□□□ -0.33
SMPD4-204ENST00000430682 SNX10Q9Y5X0 201 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 WDFY3Q8IZQ1 3526 aa12.96□□□□□ -0.33
SMPD4-204ENST00000430682 ASPMQ8IZT6 3477 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 NPC1O15118 1278 aa12.95□□□□□ -0.34
SMPD4-204ENST00000430682 TIMM44O43615 452 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms